FFCP PHASE1:Mm9::chr15:99556129..99556143,+: Difference between revisions
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|id=chr15:99556129..99556143,+ | |id=chr15:99556129..99556143,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.72e-14!50;CL:0002321!6.84e-14!70;CL:0000220!6.84e-14!70;CL:0002319!1.74e-13!43;CL:0000221!1.93e-13!44;CL:0000133!1.93e-13!44;CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23;CL:0000393!1.68e-10!39;CL:0000211!1.68e-10!39;CL:0000540!8.57e-10!33;CL:0000047!8.57e-10!33;CL:0000031!8.57e-10!33;CL:0000404!8.57e-10!33;CL:0000548!3.57e-07!115;CL:0000004!3.57e-07!115;CL:0000255!3.57e-07!115 | |ontology_enrichment_celltype=CL:0000055!1.72e-14!50;CL:0002321!6.84e-14!70;CL:0000220!6.84e-14!70;CL:0002319!1.74e-13!43;CL:0000221!1.93e-13!44;CL:0000133!1.93e-13!44;CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23;CL:0000393!1.68e-10!39;CL:0000211!1.68e-10!39;CL:0000540!8.57e-10!33;CL:0000047!8.57e-10!33;CL:0000031!8.57e-10!33;CL:0000404!8.57e-10!33;CL:0000548!3.57e-07!115;CL:0000004!3.57e-07!115;CL:0000255!3.57e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.74e-14,70;CL:0002319,1.52e-13,43;CL:0000221,1.69e-13,44;CL:0000133,1.69e-13,44;CL:0000117,1.52e-10,23;CL:0000337,1.52e-10,23;CL:0000393,1.52e-10,39;CL:0000211,1.52e-10,39;CL:0000540,7.83e-10,33;CL:0000047,7.83e-10,33;CL:0000031,7.83e-10,33;CL:0000404,7.83e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-19!73;UBERON:0005743!4.72e-19!73;UBERON:0000073!4.89e-19!75;UBERON:0001016!4.89e-19!75;UBERON:0004121!7.17e-17!102;UBERON:0000924!7.17e-17!102;UBERON:0006601!7.17e-17!102;UBERON:0002346!6.86e-16!71;UBERON:0003075!6.86e-16!71;UBERON:0007284!6.86e-16!71;UBERON:0001049!1.91e-14!52;UBERON:0005068!1.91e-14!52;UBERON:0006241!1.91e-14!52;UBERON:0007135!1.91e-14!52;UBERON:0000955!2.53e-13!50;UBERON:0006238!2.53e-13!50;UBERON:0002616!2.76e-13!49;UBERON:0002020!3.89e-13!34;UBERON:0000033!6.37e-11!63;UBERON:0002791!1.23e-10!29;UBERON:0003528!1.23e-10!29;UBERON:0001893!1.23e-10!29;UBERON:0003080!3.60e-09!40;UBERON:0002780!4.39e-09!39;UBERON:0001890!4.39e-09!39;UBERON:0006240!4.39e-09!39;UBERON:0000956!2.01e-08!21;UBERON:0001869!2.01e-08!21;UBERON:0000203!2.01e-08!21;UBERON:0002619!1.20e-07!17;UBERON:0003056!2.43e-07!49;UBERON:0000025!6.70e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!4.72e-19!73;UBERON:0005743!4.72e-19!73;UBERON:0000073!4.89e-19!75;UBERON:0001016!4.89e-19!75;UBERON:0004121!7.17e-17!102;UBERON:0000924!7.17e-17!102;UBERON:0006601!7.17e-17!102;UBERON:0002346!6.86e-16!71;UBERON:0003075!6.86e-16!71;UBERON:0007284!6.86e-16!71;UBERON:0001049!1.91e-14!52;UBERON:0005068!1.91e-14!52;UBERON:0006241!1.91e-14!52;UBERON:0007135!1.91e-14!52;UBERON:0000955!2.53e-13!50;UBERON:0006238!2.53e-13!50;UBERON:0002616!2.76e-13!49;UBERON:0002020!3.89e-13!34;UBERON:0000033!6.37e-11!63;UBERON:0002791!1.23e-10!29;UBERON:0003528!1.23e-10!29;UBERON:0001893!1.23e-10!29;UBERON:0003080!3.60e-09!40;UBERON:0002780!4.39e-09!39;UBERON:0001890!4.39e-09!39;UBERON:0006240!4.39e-09!39;UBERON:0000956!2.01e-08!21;UBERON:0001869!2.01e-08!21;UBERON:0000203!2.01e-08!21;UBERON:0002619!1.20e-07!17;UBERON:0003056!2.43e-07!49;UBERON:0000025!6.70e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.13e-21,92;UBERON:0001017,3.89e-19,73;UBERON:0001016,4.03e-19,75;UBERON:0000073,7.04e-16,54;UBERON:0001049,1.66e-14,52;UBERON:0005068,1.66e-14,52;UBERON:0006241,1.66e-14,52;UBERON:0007135,1.66e-14,52;UBERON:0004121,1.67e-13,95;UBERON:0000924,1.67e-13,95;UBERON:0006601,1.67e-13,95;UBERON:0002020,3.42e-13,34;UBERON:0002346,9.05e-13,64;UBERON:0003075,9.05e-13,64;UBERON:0007284,9.05e-13,64;UBERON:0000955,9.06e-12,47;UBERON:0006238,9.06e-12,47;UBERON:0002616,9.99e-12,46;UBERON:0003528,1.12e-10,29;UBERON:0002791,1.12e-10,29;UBERON:0001893,1.12e-10,29;UBERON:0010371,3.54e-10,73;UBERON:0003080,3.31e-09,40;UBERON:0002780,4.04e-09,39;UBERON:0001890,4.04e-09,39;UBERON:0006240,4.04e-09,39;UBERON:0000956,1.86e-08,21;UBERON:0001869,1.86e-08,21;UBERON:0000203,1.86e-08,21;UBERON:0002619,1.12e-07,17;UBERON:0003056,2.08e-07,49;UBERON:0000025,8.70e-07,114 | |||
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| ||
|short_description=p5@2310016M24Rik | |short_description=p5@2310016M24Rik | ||
}} | }} |
Revision as of 14:09, 14 November 2012
Short description: | p5@2310016M24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2310016M24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 80bp_to_ENSMUST00000023761, NM_183256, uc007xqe.2_5end |
EntrezGene: | 2310016M24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.74e-14 | 70 |
neural cell | 1.52e-13 | 43 |
ectodermal cell | 1.69e-13 | 44 |
neurectodermal cell | 1.69e-13 | 44 |
CNS neuron (sensu Vertebrata) | 1.52e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-10 | 23 |
electrically responsive cell | 1.52e-10 | 39 |
electrically active cell | 1.52e-10 | 39 |
neuron | 7.83e-10 | 33 |
neuronal stem cell | 7.83e-10 | 33 |
neuroblast | 7.83e-10 | 33 |
electrically signaling cell | 7.83e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.13e-21 | 92 |
central nervous system | 3.89e-19 | 73 |
nervous system | 4.03e-19 | 75 |
regional part of nervous system | 7.04e-16 | 54 |
neural tube | 1.66e-14 | 52 |
neural rod | 1.66e-14 | 52 |
future spinal cord | 1.66e-14 | 52 |
neural keel | 1.66e-14 | 52 |
ectoderm-derived structure | 1.67e-13 | 95 |
ectoderm | 1.67e-13 | 95 |
presumptive ectoderm | 1.67e-13 | 95 |
gray matter | 3.42e-13 | 34 |
neurectoderm | 9.05e-13 | 64 |
neural plate | 9.05e-13 | 64 |
presumptive neural plate | 9.05e-13 | 64 |
brain | 9.06e-12 | 47 |
future brain | 9.06e-12 | 47 |
regional part of brain | 9.99e-12 | 46 |
brain grey matter | 1.12e-10 | 29 |
regional part of telencephalon | 1.12e-10 | 29 |
telencephalon | 1.12e-10 | 29 |
ecto-epithelium | 3.54e-10 | 73 |
anterior neural tube | 3.31e-09 | 40 |
regional part of forebrain | 4.04e-09 | 39 |
forebrain | 4.04e-09 | 39 |
future forebrain | 4.04e-09 | 39 |
cerebral cortex | 1.86e-08 | 21 |
cerebral hemisphere | 1.86e-08 | 21 |
pallium | 1.86e-08 | 21 |
regional part of cerebral cortex | 1.12e-07 | 17 |
pre-chordal neural plate | 2.08e-07 | 49 |
tube | 8.70e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.