FFCP PHASE1:Mm9::chr2:130276065..130276085,+: Difference between revisions
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|id=chr2:130276065..130276085,+ | |id=chr2:130276065..130276085,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.73e-14!43;CL:0000221!4.46e-14!44;CL:0000133!4.46e-14!44;CL:0000055!6.23e-14!50;CL:0000393!1.15e-13!39;CL:0000211!1.15e-13!39;CL:0000540!5.13e-13!33;CL:0000047!5.13e-13!33;CL:0000031!5.13e-13!33;CL:0000404!5.13e-13!33;CL:0000117!2.15e-11!23;CL:0000337!2.15e-11!23;CL:0002321!8.00e-07!70;CL:0000220!8.00e-07!70 | |ontology_enrichment_celltype=CL:0002319!3.73e-14!43;CL:0000221!4.46e-14!44;CL:0000133!4.46e-14!44;CL:0000055!6.23e-14!50;CL:0000393!1.15e-13!39;CL:0000211!1.15e-13!39;CL:0000540!5.13e-13!33;CL:0000047!5.13e-13!33;CL:0000031!5.13e-13!33;CL:0000404!5.13e-13!33;CL:0000117!2.15e-11!23;CL:0000337!2.15e-11!23;CL:0002321!8.00e-07!70;CL:0000220!8.00e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.72e-15,43;CL:0000221,8.14e-15,44;CL:0000133,8.14e-15,44;CL:0000393,2.90e-14,39;CL:0000211,2.90e-14,39;CL:0000540,1.39e-13,33;CL:0000047,1.39e-13,33;CL:0000031,1.39e-13,33;CL:0000404,1.39e-13,33;CL:0000117,7.02e-12,23;CL:0000337,7.02e-12,23;CL:0002321,2.80e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.47e-26!75;UBERON:0001016!1.47e-26!75;UBERON:0001017!2.95e-25!73;UBERON:0005743!2.95e-25!73;UBERON:0004121!4.11e-24!102;UBERON:0000924!4.11e-24!102;UBERON:0006601!4.11e-24!102;UBERON:0002346!3.86e-20!71;UBERON:0003075!3.86e-20!71;UBERON:0007284!3.86e-20!71;UBERON:0001049!1.07e-18!52;UBERON:0005068!1.07e-18!52;UBERON:0006241!1.07e-18!52;UBERON:0007135!1.07e-18!52;UBERON:0000033!1.26e-18!63;UBERON:0000955!4.86e-17!50;UBERON:0006238!4.86e-17!50;UBERON:0002616!1.57e-16!49;UBERON:0003056!8.05e-16!49;UBERON:0002020!9.03e-15!34;UBERON:0000153!9.23e-15!94;UBERON:0007811!2.92e-14!86;UBERON:0003080!1.29e-12!40;UBERON:0002780!2.86e-12!39;UBERON:0001890!2.86e-12!39;UBERON:0006240!2.86e-12!39;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0000956!6.59e-08!21;UBERON:0001869!6.59e-08!21;UBERON:0000203!6.59e-08!21;UBERON:0002619!3.54e-07!17;UBERON:0003076!4.18e-07!12;UBERON:0003057!4.18e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.47e-26!75;UBERON:0001016!1.47e-26!75;UBERON:0001017!2.95e-25!73;UBERON:0005743!2.95e-25!73;UBERON:0004121!4.11e-24!102;UBERON:0000924!4.11e-24!102;UBERON:0006601!4.11e-24!102;UBERON:0002346!3.86e-20!71;UBERON:0003075!3.86e-20!71;UBERON:0007284!3.86e-20!71;UBERON:0001049!1.07e-18!52;UBERON:0005068!1.07e-18!52;UBERON:0006241!1.07e-18!52;UBERON:0007135!1.07e-18!52;UBERON:0000033!1.26e-18!63;UBERON:0000955!4.86e-17!50;UBERON:0006238!4.86e-17!50;UBERON:0002616!1.57e-16!49;UBERON:0003056!8.05e-16!49;UBERON:0002020!9.03e-15!34;UBERON:0000153!9.23e-15!94;UBERON:0007811!2.92e-14!86;UBERON:0003080!1.29e-12!40;UBERON:0002780!2.86e-12!39;UBERON:0001890!2.86e-12!39;UBERON:0006240!2.86e-12!39;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0000956!6.59e-08!21;UBERON:0001869!6.59e-08!21;UBERON:0000203!6.59e-08!21;UBERON:0002619!3.54e-07!17;UBERON:0003076!4.18e-07!12;UBERON:0003057!4.18e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.70e-28,95;UBERON:0000924,2.70e-28,95;UBERON:0006601,2.70e-28,95;UBERON:0001016,5.41e-28,75;UBERON:0001017,1.27e-26,73;UBERON:0002346,7.33e-24,64;UBERON:0003075,7.33e-24,64;UBERON:0007284,7.33e-24,64;UBERON:0010371,2.16e-21,73;UBERON:0000073,1.14e-20,54;UBERON:0001049,1.93e-19,52;UBERON:0005068,1.93e-19,52;UBERON:0006241,1.93e-19,52;UBERON:0007135,1.93e-19,52;UBERON:0003056,1.99e-16,49;UBERON:0000955,3.34e-16,47;UBERON:0006238,3.34e-16,47;UBERON:0010314,1.05e-15,92;UBERON:0002616,1.11e-15,46;UBERON:0002020,2.98e-15,34;UBERON:0003080,4.58e-13,40;UBERON:0002780,1.05e-12,39;UBERON:0001890,1.05e-12,39;UBERON:0006240,1.05e-12,39;UBERON:0003528,6.96e-12,29;UBERON:0002791,6.96e-12,29;UBERON:0001893,6.96e-12,29;UBERON:0000956,4.51e-08,21;UBERON:0001869,4.51e-08,21;UBERON:0000203,4.51e-08,21;UBERON:0003076,2.22e-07,12;UBERON:0003057,2.22e-07,12;UBERON:0002619,2.67e-07,17 | |||
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| ||
|short_description=p2@Ptpra | |short_description=p2@Ptpra | ||
}} | }} |
Revision as of 23:45, 14 November 2012
Short description: | p2@Ptpra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptpra_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_ENSMUST00000028769, ENSMUST00000110266, NM_001163688, NM_008980, uc008mjc.2, uc008mjd.2_5end |
EntrezGene: | Ptpra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.72e-15 | 43 |
ectodermal cell | 8.14e-15 | 44 |
neurectodermal cell | 8.14e-15 | 44 |
electrically responsive cell | 2.90e-14 | 39 |
electrically active cell | 2.90e-14 | 39 |
neuron | 1.39e-13 | 33 |
neuronal stem cell | 1.39e-13 | 33 |
neuroblast | 1.39e-13 | 33 |
electrically signaling cell | 1.39e-13 | 33 |
CNS neuron (sensu Vertebrata) | 7.02e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.02e-12 | 23 |
embryonic cell | 2.80e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.70e-28 | 95 |
ectoderm | 2.70e-28 | 95 |
presumptive ectoderm | 2.70e-28 | 95 |
nervous system | 5.41e-28 | 75 |
central nervous system | 1.27e-26 | 73 |
neurectoderm | 7.33e-24 | 64 |
neural plate | 7.33e-24 | 64 |
presumptive neural plate | 7.33e-24 | 64 |
ecto-epithelium | 2.16e-21 | 73 |
regional part of nervous system | 1.14e-20 | 54 |
neural tube | 1.93e-19 | 52 |
neural rod | 1.93e-19 | 52 |
future spinal cord | 1.93e-19 | 52 |
neural keel | 1.93e-19 | 52 |
pre-chordal neural plate | 1.99e-16 | 49 |
brain | 3.34e-16 | 47 |
future brain | 3.34e-16 | 47 |
structure with developmental contribution from neural crest | 1.05e-15 | 92 |
regional part of brain | 1.11e-15 | 46 |
gray matter | 2.98e-15 | 34 |
anterior neural tube | 4.58e-13 | 40 |
regional part of forebrain | 1.05e-12 | 39 |
forebrain | 1.05e-12 | 39 |
future forebrain | 1.05e-12 | 39 |
brain grey matter | 6.96e-12 | 29 |
regional part of telencephalon | 6.96e-12 | 29 |
telencephalon | 6.96e-12 | 29 |
cerebral cortex | 4.51e-08 | 21 |
cerebral hemisphere | 4.51e-08 | 21 |
pallium | 4.51e-08 | 21 |
posterior neural tube | 2.22e-07 | 12 |
chordal neural plate | 2.22e-07 | 12 |
regional part of cerebral cortex | 2.67e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.