FFCP PHASE1:Mm9::chr5:125866346..125866349,+: Difference between revisions
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|id=chr5:125866346..125866349,+ | |id=chr5:125866346..125866349,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.46e-25,3;CL:0002202,1.46e-25,3;CL:0000069,1.46e-25,3;CL:0002632,1.46e-25,3;CL:0002368,1.46e-25,3;CL:0000307,1.46e-25,3;CL:0000377,1.46e-25,3;CL:0000057,1.73e-09,1;CL:0000632,1.73e-09,1;CL:0000213,2.09e-09,1;CL:0002078,2.09e-09,1;CL:0000115,2.09e-09,1;CL:0002262,2.09e-09,1;CL:1000398,2.09e-09,1;CL:0002374,4.39e-09,1;CL:0000202,4.39e-09,1;CL:0000199,4.39e-09,1;CL:0000855,4.39e-09,1;CL:0000589,4.39e-09,1;CL:0000945,6.33e-09,1;CL:0000236,6.33e-09,1;CL:0000826,6.33e-09,1;CL:0000066,3.19e-08,25;CL:0000223,6.53e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.23e-11,3;DOID:4045,2.23e-11,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.46e-25,3;UBERON:0001005,1.46e-25,3;UBERON:0007196,1.46e-25,3;UBERON:0001558,1.46e-25,3;UBERON:0002394,2.09e-09,1;UBERON:0001281,2.09e-09,1;UBERON:0000353,2.09e-09,1;UBERON:0003497,2.09e-09,1;UBERON:0003909,2.09e-09,1;UBERON:0003928,2.09e-09,1;UBERON:0003835,2.09e-09,1;UBERON:0003513,2.09e-09,1;UBERON:0001280,2.09e-09,1;UBERON:0004647,2.09e-09,1;UBERON:0002294,2.09e-09,1;UBERON:0001173,2.09e-09,1;UBERON:0004912,2.09e-09,1;UBERON:0005171,2.09e-09,1;UBERON:0001374,3.65e-09,1;UBERON:0004252,3.65e-09,1;UBERON:0003663,3.65e-09,1;UBERON:0005090,3.65e-09,1;UBERON:0001630,3.65e-09,1;UBERON:0003661,3.65e-09,1;UBERON:0010890,3.65e-09,1;UBERON:0001383,3.65e-09,1;UBERON:0000383,1.17e-07,10;UBERON:0007524,5.47e-07,11;UBERON:0003077,5.47e-07,11;UBERON:0007285,5.47e-07,11 | |||
|phase1_expression=1.44133962394315,0,0.454999239389536,0,0.500895729946347,0,0,0,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,0,0,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,1.17447824240415,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,3.44169550792555,0,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0,0.422530259330042,0,0,0,4.76280290224671,4.56047757855178,4.04419556011827,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,1.70498099637356,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0.496375471371293,0,0.774958940866387,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.192423683280659,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=1.44133962394315,0,0.454999239389536,0,0.500895729946347,0,0,0,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,0,0,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,1.17447824240415,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,3.44169550792555,0,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0,0.422530259330042,0,0,0,4.76280290224671,4.56047757855178,4.04419556011827,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,1.70498099637356,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0.496375471371293,0,0.774958940866387,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.192423683280659,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr5:125866346..125866349,+ | |short_description=p@chr5:125866346..125866349,+ | ||
}} | }} |
Revision as of 01:45, 15 November 2012
Short description: | p@chr5:125866346..125866349, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:125866346..125866349, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.46e-25 | 3 |
epithelial cell of tracheobronchial tree | 1.46e-25 | 3 |
branched duct epithelial cell | 1.46e-25 | 3 |
epithelial cell of lower respiratory tract | 1.46e-25 | 3 |
respiratory epithelial cell | 1.46e-25 | 3 |
tracheal epithelial cell | 1.46e-25 | 3 |
tracheoblast | 1.46e-25 | 3 |
fibroblast | 1.73e-09 | 1 |
hepatic stellate cell | 1.73e-09 | 1 |
lining cell | 2.09e-09 | 1 |
meso-epithelial cell | 2.09e-09 | 1 |
endothelial cell | 2.09e-09 | 1 |
endothelial cell of sinusoid | 2.09e-09 | 1 |
endothelial cell of hepatic sinusoid | 2.09e-09 | 1 |
ear hair cell | 4.39e-09 | 1 |
auditory hair cell | 4.39e-09 | 1 |
mechanoreceptor cell | 4.39e-09 | 1 |
sensory hair cell | 4.39e-09 | 1 |
cochlear inner hair cell | 4.39e-09 | 1 |
lymphocyte of B lineage | 6.33e-09 | 1 |
B cell | 6.33e-09 | 1 |
pro-B cell | 6.33e-09 | 1 |
epithelial cell | 3.19e-08 | 25 |
endodermal cell | 6.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.46e-25 | 3 |
respiratory airway | 1.46e-25 | 3 |
tracheobronchial tree | 1.46e-25 | 3 |
lower respiratory tract | 1.46e-25 | 3 |
bile duct | 2.09e-09 | 1 |
hepatic sinusoid | 2.09e-09 | 1 |
parenchyma | 2.09e-09 | 1 |
abdomen blood vessel | 2.09e-09 | 1 |
sinusoid | 2.09e-09 | 1 |
digestive system duct | 2.09e-09 | 1 |
abdominal segment blood vessel | 2.09e-09 | 1 |
trunk blood vessel | 2.09e-09 | 1 |
liver parenchyma | 2.09e-09 | 1 |
liver lobule | 2.09e-09 | 1 |
biliary system | 2.09e-09 | 1 |
biliary tree | 2.09e-09 | 1 |
biliary bud | 2.09e-09 | 1 |
hepatic duct | 2.09e-09 | 1 |
biceps femoris | 3.65e-09 | 1 |
hindlimb stylopod muscle | 3.65e-09 | 1 |
hindlimb muscle | 3.65e-09 | 1 |
muscle structure | 3.65e-09 | 1 |
muscle organ | 3.65e-09 | 1 |
limb muscle | 3.65e-09 | 1 |
pelvic complex muscle | 3.65e-09 | 1 |
muscle of leg | 3.65e-09 | 1 |
musculature of body | 1.17e-07 | 10 |
dense mesenchyme tissue | 5.47e-07 | 11 |
paraxial mesoderm | 5.47e-07 | 11 |
presumptive paraxial mesoderm | 5.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.23e-11 | 3 |
muscle cancer | 2.23e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.