FFCP PHASE1:Hg19::chr7:149700989..149701027,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.68e-23;3!UBERON:0003056;6.32e-07;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.68e-23;3!UBERON:0003056;6.32e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-26!115;UBERON:0001049!2.12e-25!57;UBERON:0005068!2.12e-25!57;UBERON:0006241!2.12e-25!57;UBERON:0007135!2.12e-25!57;UBERON:0002616!1.44e-22!59;UBERON:0000955!1.17e-20!69;UBERON:0006238!1.17e-20!69;UBERON:0002780!5.67e-20!41;UBERON:0001890!5.67e-20!41;UBERON:0006240!5.67e-20!41;UBERON:0003080!2.45e-19!42;UBERON:0001017!4.22e-17!82;UBERON:0002020!1.49e-16!34;UBERON:0003528!1.49e-16!34;UBERON:0002346!2.06e-16!90;UBERON:0001893!3.28e-16!34;UBERON:0005743!7.19e-16!86;UBERON:0002791!4.48e-15!33;UBERON:0003075!5.47e-15!86;UBERON:0007284!5.47e-15!86;UBERON:0001869!6.80e-14!32;UBERON:0000073!1.72e-13!94;UBERON:0001016!1.72e-13!94;UBERON:0003056!1.34e-12!61;UBERON:0002619!5.68e-11!22;UBERON:0000153!2.10e-10!129;UBERON:0007811!2.10e-10!129;UBERON:0001950!3.00e-10!20;UBERON:0002308!7.78e-10!9;UBERON:0000125!7.78e-10!9;UBERON:0000956!2.51e-09!25;UBERON:0000203!2.51e-09!25;UBERON:0000033!3.19e-09!123;UBERON:0002298!2.41e-08!8;UBERON:0004733!1.90e-07!12;UBERON:0002028!1.90e-07!12;UBERON:0007277!1.90e-07!12;UBERON:0000025!2.18e-07!194;UBERON:0003076!2.99e-07!15;UBERON:0003057!2.99e-07!15;UBERON:0002420!3.56e-07!9;UBERON:0007245!3.56e-07!9;UBERON:0010009!3.56e-07!9;UBERON:0010011!3.56e-07!9;UBERON:0000454!3.56e-07!9;UBERON:0004732!8.97e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!1.21e-26!115;UBERON:0001049!2.12e-25!57;UBERON:0005068!2.12e-25!57;UBERON:0006241!2.12e-25!57;UBERON:0007135!2.12e-25!57;UBERON:0002616!1.44e-22!59;UBERON:0000955!1.17e-20!69;UBERON:0006238!1.17e-20!69;UBERON:0002780!5.67e-20!41;UBERON:0001890!5.67e-20!41;UBERON:0006240!5.67e-20!41;UBERON:0003080!2.45e-19!42;UBERON:0001017!4.22e-17!82;UBERON:0002020!1.49e-16!34;UBERON:0003528!1.49e-16!34;UBERON:0002346!2.06e-16!90;UBERON:0001893!3.28e-16!34;UBERON:0005743!7.19e-16!86;UBERON:0002791!4.48e-15!33;UBERON:0003075!5.47e-15!86;UBERON:0007284!5.47e-15!86;UBERON:0001869!6.80e-14!32;UBERON:0000073!1.72e-13!94;UBERON:0001016!1.72e-13!94;UBERON:0003056!1.34e-12!61;UBERON:0002619!5.68e-11!22;UBERON:0000153!2.10e-10!129;UBERON:0007811!2.10e-10!129;UBERON:0001950!3.00e-10!20;UBERON:0002308!7.78e-10!9;UBERON:0000125!7.78e-10!9;UBERON:0000956!2.51e-09!25;UBERON:0000203!2.51e-09!25;UBERON:0000033!3.19e-09!123;UBERON:0002298!2.41e-08!8;UBERON:0004733!1.90e-07!12;UBERON:0002028!1.90e-07!12;UBERON:0007277!1.90e-07!12;UBERON:0000025!2.18e-07!194;UBERON:0003076!2.99e-07!15;UBERON:0003057!2.99e-07!15;UBERON:0002420!3.56e-07!9;UBERON:0007245!3.56e-07!9;UBERON:0010009!3.56e-07!9;UBERON:0010011!3.56e-07!9;UBERON:0000454!3.56e-07!9;UBERON:0004732!8.97e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.72e-38;4!UBERON:0010133;6.72e-38;4!UBERON:0001905;2.18e-34;2!UBERON:0002757;2.18e-34;2!UBERON:0010134;2.18e-34;2!UBERON:0005408;2.18e-34;2!UBERON:0001899;2.18e-34;2!UBERON:0001894;5.30e-22;7!UBERON:0002784;9.51e-18;4!UBERON:0002037;4.30e-12;6!UBERON:0000007;1.57e-09;2!UBERON:0002680;2.29e-08;9!UBERON:0001895;2.29e-08;9!UBERON:0002368;7.98e-08;33!UBERON:0000955;6.05e-07;68!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0003296;6.72e-38;4!UBERON:0010133;6.72e-38;4!UBERON:0001905;2.18e-34;2!UBERON:0002757;2.18e-34;2!UBERON:0010134;2.18e-34;2!UBERON:0005408;2.18e-34;2!UBERON:0001899;2.18e-34;2!UBERON:0001894;5.30e-22;7!UBERON:0002784;9.51e-18;4!UBERON:0002037;4.30e-12;6!UBERON:0000007;1.57e-09;2!UBERON:0002680;2.29e-08;9!UBERON:0001895;2.29e-08;9!UBERON:0002368;7.98e-08;33!UBERON:0000955;6.05e-07;68!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.23e-38,4;UBERON:0010133,5.23e-38,4;UBERON:0001905,2.18e-34,2;UBERON:0002757,2.18e-34,2;UBERON:0010134,2.18e-34,2;UBERON:0005408,2.18e-34,2;UBERON:0001899,2.18e-34,2;UBERON:0001894,4.59e-22,7;UBERON:0006222,4.59e-22,7;UBERON:0002784,9.51e-18,4;UBERON:0002037,5.08e-12,6;UBERON:0006215,5.08e-12,6;UBERON:0002346,1.14e-11,86;UBERON:0000955,2.98e-11,68;UBERON:0006238,2.98e-11,68;UBERON:0000073,6.95e-11,53;UBERON:0002616,6.95e-11,53;UBERON:0001049,2.67e-10,56;UBERON:0005068,2.67e-10,56;UBERON:0006241,2.67e-10,56;UBERON:0007135,2.67e-10,56;UBERON:0000007,1.33e-09,2;UBERON:0001017,2.01e-09,81;UBERON:0003075,2.01e-09,82;UBERON:0007284,2.01e-09,82;UBERON:0001016,1.86e-08,89;UBERON:0002680,2.55e-08,9;UBERON:0001895,2.55e-08,9;UBERON:0010092,2.55e-08,9;UBERON:0002368,6.80e-08,35;UBERON:0010314,2.14e-07,132;UBERON:0010371,2.37e-07,104;UBERON:0003056,9.54e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,7.6299689352545,1.18219047581419,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.247127877893006,0.417687798021821,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.196854963029498,0,0,0.817220436669454,0,0,0,0,0,0.364497339948148,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.3755727921195,0,0.887432412294818,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.850299680406731,0,0,0,0.47317047000752,0,0,0,0.578063025868136,0,1.27707087245721,0.41023272848151,0.756215088665154,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0.202612753855184,0,0,0.0634158101939068,0,0,0,1.93458368795583,0,2.14280734351315,5.71682327772001,0,1.59363533945908,0,0,0,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0,0.647782773655864,0.47775168788705,0,5.05643557544725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,2.58636007709779,0.118920090777569,0,1.31928620094515,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.724030971033267,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,1.21270313374932,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,7.6299689352545,1.18219047581419,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.247127877893006,0.417687798021821,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.196854963029498,0,0,0.817220436669454,0,0,0,0,0,0.364497339948148,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.3755727921195,0,0.887432412294818,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.850299680406731,0,0,0,0.47317047000752,0,0,0,0.578063025868136,0,1.27707087245721,0.41023272848151,0.756215088665154,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0.202612753855184,0,0,0.0634158101939068,0,0,0,1.93458368795583,0,2.14280734351315,5.71682327772001,0,1.59363533945908,0,0,0,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0,0.647782773655864,0.47775168788705,0,5.05643557544725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,2.58636007709779,0.118920090777569,0,1.31928620094515,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.724030971033267,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,1.21270313374932,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr7:149700989..149701027,- | |short_description=p@chr7:149700989..149701027,- | ||
}} | }} |
Revision as of 20:03, 15 November 2012
Short description: | p@chr7:149700989..149701027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:149700989..149701027, - |
Coexpression cluster: | C466_cerebellum_retinoblastoma_pineal_small_pituitary_parietal_pons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.23e-38 | 4 |
neuroendocrine gland | 5.23e-38 | 4 |
pineal body | 2.18e-34 | 2 |
regional part of epithalamus | 2.18e-34 | 2 |
secretory circumventricular organ | 2.18e-34 | 2 |
circumventricular organ | 2.18e-34 | 2 |
epithalamus | 2.18e-34 | 2 |
diencephalon | 4.59e-22 | 7 |
future diencephalon | 4.59e-22 | 7 |
regional part of diencephalon | 9.51e-18 | 4 |
cerebellum | 5.08e-12 | 6 |
rhombic lip | 5.08e-12 | 6 |
neurectoderm | 1.14e-11 | 86 |
brain | 2.98e-11 | 68 |
future brain | 2.98e-11 | 68 |
regional part of nervous system | 6.95e-11 | 53 |
regional part of brain | 6.95e-11 | 53 |
neural tube | 2.67e-10 | 56 |
neural rod | 2.67e-10 | 56 |
future spinal cord | 2.67e-10 | 56 |
neural keel | 2.67e-10 | 56 |
pituitary gland | 1.33e-09 | 2 |
central nervous system | 2.01e-09 | 81 |
neural plate | 2.01e-09 | 82 |
presumptive neural plate | 2.01e-09 | 82 |
nervous system | 1.86e-08 | 89 |
regional part of metencephalon | 2.55e-08 | 9 |
metencephalon | 2.55e-08 | 9 |
future metencephalon | 2.55e-08 | 9 |
endocrine gland | 6.80e-08 | 35 |
structure with developmental contribution from neural crest | 2.14e-07 | 132 |
ecto-epithelium | 2.37e-07 | 104 |
pre-chordal neural plate | 9.54e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.