FFCP PHASE1:Hg19::chr9:116840728..116840744,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!1.85e-09!12;CL:0000417!1.85e-09!12;CL:0000668!1.85e-09!12;CL:0000414!1.85e-09!12;CL:0000412!1.85e-09!12;CL:0000182!1.85e-09!12 | |ontology_enrichment_celltype=CL:0000181!1.85e-09!12;CL:0000417!1.85e-09!12;CL:0000668!1.85e-09!12;CL:0000414!1.85e-09!12;CL:0000412!1.85e-09!12;CL:0000182!1.85e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.24e-31;12!CL:0000319;4.06e-07;1 | |ontology_enrichment_celltype_v019=CL:0000182;9.24e-31;12!CL:0000319;4.06e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.56e-31,12;CL:0000223,3.90e-10,58;CL:0000319,4.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.66e-35;13!UBERON:0004161;2.70e-33;11!UBERON:0003104;2.25e-16;31!UBERON:0001041;2.51e-14;30!CL:0000223;7.86e-08;58!UBERON:0006242;3.82e-07;1 | |ontology_enrichment_development_v019=UBERON:0009497;3.66e-35;13!UBERON:0004161;2.70e-33;11!UBERON:0003104;2.25e-16;31!UBERON:0001041;2.51e-14;30!CL:0000223;7.86e-08;58!UBERON:0006242;3.82e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;4.06e-07;1!DOID:5662;9.18e-07;1 | |ontology_enrichment_disease_v019=DOID:3030;4.06e-07;1!DOID:5662;9.18e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,4.06e-07,1;DOID:5662,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.40e-10!26;UBERON:0002107!2.49e-10!19;UBERON:0006925!2.49e-10!19;UBERON:0008836!2.49e-10!19;UBERON:0009497!3.04e-10!25;UBERON:0000015!3.04e-10!25;UBERON:0002423!3.04e-10!25;UBERON:0006235!3.04e-10!25;UBERON:0004161!3.04e-10!25;UBERON:0008835!3.15e-10!22;UBERON:0003894!3.15e-10!22;UBERON:0005172!6.88e-10!55;UBERON:0005173!6.88e-10!55;UBERON:0009854!1.24e-09!23;UBERON:0002417!3.79e-09!61;UBERON:0000916!3.79e-09!61;UBERON:0003929!7.03e-09!54;UBERON:0005911!1.32e-08!82;UBERON:0007499!1.37e-08!25;UBERON:0004921!1.88e-08!129;UBERON:0004185!1.88e-08!129;UBERON:0005177!3.62e-08!107;UBERON:0009856!3.95e-08!26;UBERON:0001007!4.84e-08!155;UBERON:0001555!4.84e-08!155;UBERON:0007026!4.84e-08!155;UBERON:0002368!7.64e-07!35;UBERON:0001048!9.79e-07!168 | |ontology_enrichment_uberon=UBERON:0005057!1.40e-10!26;UBERON:0002107!2.49e-10!19;UBERON:0006925!2.49e-10!19;UBERON:0008836!2.49e-10!19;UBERON:0009497!3.04e-10!25;UBERON:0000015!3.04e-10!25;UBERON:0002423!3.04e-10!25;UBERON:0006235!3.04e-10!25;UBERON:0004161!3.04e-10!25;UBERON:0008835!3.15e-10!22;UBERON:0003894!3.15e-10!22;UBERON:0005172!6.88e-10!55;UBERON:0005173!6.88e-10!55;UBERON:0009854!1.24e-09!23;UBERON:0002417!3.79e-09!61;UBERON:0000916!3.79e-09!61;UBERON:0003929!7.03e-09!54;UBERON:0005911!1.32e-08!82;UBERON:0007499!1.37e-08!25;UBERON:0004921!1.88e-08!129;UBERON:0004185!1.88e-08!129;UBERON:0005177!3.62e-08!107;UBERON:0009856!3.95e-08!26;UBERON:0001007!4.84e-08!155;UBERON:0001555!4.84e-08!155;UBERON:0007026!4.84e-08!155;UBERON:0002368!7.64e-07!35;UBERON:0001048!9.79e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.32e-37;25!UBERON:0002107;6.56e-36;19!UBERON:0006925;6.56e-36;19!UBERON:0002365;8.37e-21;31!UBERON:0002330;8.37e-21;31!UBERON:0002368;1.42e-18;33!UBERON:0005172;5.05e-15;52!UBERON:0005173;5.05e-15;52!UBERON:0000949;3.94e-13;43!UBERON:0002417;1.31e-09;58!UBERON:0000916;1.31e-09;58!UBERON:0002530;8.50e-08;57!UBERON:0001007;8.29e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002423;2.32e-37;25!UBERON:0002107;6.56e-36;19!UBERON:0006925;6.56e-36;19!UBERON:0002365;8.37e-21;31!UBERON:0002330;8.37e-21;31!UBERON:0002368;1.42e-18;33!UBERON:0005172;5.05e-15;52!UBERON:0005173;5.05e-15;52!UBERON:0000949;3.94e-13;43!UBERON:0002417;1.31e-09;58!UBERON:0000916;1.31e-09;58!UBERON:0002530;8.50e-08;57!UBERON:0001007;8.29e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.15e-37,25;UBERON:0000015,2.15e-37,25;UBERON:0002423,2.15e-37,25;UBERON:0006235,2.15e-37,25;UBERON:0004161,2.15e-37,25;UBERON:0008835,1.74e-36,22;UBERON:0003894,1.74e-36,22;UBERON:0002107,6.34e-36,19;UBERON:0006925,6.34e-36,19;UBERON:0008836,6.34e-36,19;UBERON:0009854,8.53e-35,23;UBERON:0007499,8.06e-32,25;UBERON:0009856,1.67e-30,26;UBERON:0005172,2.94e-21,54;UBERON:0005173,2.94e-21,54;UBERON:0003929,3.37e-21,54;UBERON:0002365,3.39e-21,31;UBERON:0002330,3.39e-21,31;UBERON:0002417,8.16e-19,60;UBERON:0000916,8.16e-19,60;UBERON:0002368,1.57e-18,35;UBERON:0000949,1.22e-16,45;UBERON:0005911,8.39e-15,82;UBERON:0005177,4.55e-13,101;UBERON:0002530,4.71e-12,59;UBERON:0009569,5.70e-10,112;UBERON:0004921,3.76e-09,118;UBERON:0005256,7.64e-09,122;UBERON:0001041,7.72e-09,87;UBERON:0001007,6.35e-08,145;UBERON:0001555,6.35e-08,145;UBERON:0007026,6.35e-08,145;UBERON:0003104,6.46e-08,160;UBERON:0009142,6.46e-08,160;UBERON:0002100,2.18e-07,199;UBERON:0003914,5.54e-07,117;UBERON:0004119,7.24e-07,160;UBERON:0000925,7.24e-07,160;UBERON:0006595,7.24e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0.435758888184812,0.237270619111097,0,0,0,0,0,3.2925920906512,0,254.77761999188,313.521882120163,127.610619843183,0,1.47586126251736,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,1.20859449591622,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0.831076008928724,0,0,0,0,0,0,89.8517621568138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,83.7879826913335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.82402611272,0.20453736500431,0.246169610922139,0,0,2.68531762013414,0,0.0986434056369336,0,0,3.87733098438087,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,2.28525931422807,0.565412285735763,0,0.995261931078505,0.176915129006678,0,0,0.123563938946503,0,0,0,0.234264445725339,0.729819156862664,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,11.3843818411917,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,8.1112138000954,0,0,0,45.6442694312826,0,0,0,0,0.313808538937,0.407992870545287,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,55.8572762558216,50.4385053292739,55.9449413989735,577.769316491575,0.338693328263138,0,0,0.803765742325096,2.06309154895851,1.24632101408756,0,0,0,0,11.5056332656829,0.786818822024972,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,122.664219588555,87.4545466820661,0,0,2.9084762440336,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,17.4244232639804,0,0,0,0,0.132864840313363,0,0,6.88164144510414,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,5.47059807863165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54339208493677,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0.329821550236287,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.45120521581504,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0.462175628631418,0,0.630832124175395,0.109265571963696,0.126698501011437,0,0.26721740526556,0,0,0,0.267964130156178,0,0,0,0.476128862927481,0.129177819672012,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0.435758888184812,0.237270619111097,0,0,0,0,0,3.2925920906512,0,254.77761999188,313.521882120163,127.610619843183,0,1.47586126251736,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,1.20859449591622,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0.831076008928724,0,0,0,0,0,0,89.8517621568138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,83.7879826913335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.82402611272,0.20453736500431,0.246169610922139,0,0,2.68531762013414,0,0.0986434056369336,0,0,3.87733098438087,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,2.28525931422807,0.565412285735763,0,0.995261931078505,0.176915129006678,0,0,0.123563938946503,0,0,0,0.234264445725339,0.729819156862664,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,11.3843818411917,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,8.1112138000954,0,0,0,45.6442694312826,0,0,0,0,0.313808538937,0.407992870545287,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,55.8572762558216,50.4385053292739,55.9449413989735,577.769316491575,0.338693328263138,0,0,0.803765742325096,2.06309154895851,1.24632101408756,0,0,0,0,11.5056332656829,0.786818822024972,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,122.664219588555,87.4545466820661,0,0,2.9084762440336,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,17.4244232639804,0,0,0,0,0.132864840313363,0,0,6.88164144510414,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,5.47059807863165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54339208493677,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0.329821550236287,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.45120521581504,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0.462175628631418,0,0.630832124175395,0.109265571963696,0.126698501011437,0,0.26721740526556,0,0,0,0.267964130156178,0,0,0,0.476128862927481,0.129177819672012,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0.320568492303233 | ||
|short_description=p2@AMBP | |short_description=p2@AMBP | ||
}} | }} |
Revision as of 03:12, 18 November 2012
Short description: | p2@AMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AMBP_5end |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | 7bp_to_ENST00000265132, NM_001633, uc004bie.3, uc010mvc.1_5end |
EntrezGene: | AMBP |
HGNC: | 453 |
UniProt: | P02760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.56e-31 | 12 |
endodermal cell | 3.90e-10 | 58 |
mucus secreting cell | 4.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.06e-07 | 1 |
pleomorphic carcinoma | 8.18e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.