FFCP PHASE1:Hg19::chr14:52168958..52169000,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.58e-30!12;UBERON:0002028!3.58e-30!12;UBERON:0007277!3.58e-30!12;UBERON:0002680!3.37e-28!9;UBERON:0001895!3.37e-28!9;UBERON:0010092!3.37e-28!9;UBERON:0004732!7.87e-28!13;UBERON:0003076!4.43e-24!15;UBERON:0003057!4.43e-24!15;UBERON:0002616!3.21e-22!59;UBERON:0002298!2.82e-20!8;UBERON:0001049!3.00e-19!57;UBERON:0005068!3.00e-19!57;UBERON:0006241!3.00e-19!57;UBERON:0007135!3.00e-19!57;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0002308!9.87e-18!9;UBERON:0000125!9.87e-18!9;UBERON:0002037!3.69e-16!6;UBERON:0006215!3.69e-16!6;UBERON:0001017!2.33e-15!82;UBERON:0005743!1.41e-14!86;UBERON:0006331!2.77e-14!3;UBERON:0000988!2.96e-14!3;UBERON:0009663!3.72e-13!7;UBERON:0000073!4.69e-13!94;UBERON:0001016!4.69e-13!94;UBERON:0007023!1.02e-12!115;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0002346!1.11e-11!90;UBERON:0000033!1.63e-11!123;UBERON:0002038!2.96e-11!1;UBERON:0009661!2.96e-11!1;UBERON:0001882!5.43e-11!1;UBERON:0005403!5.43e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0000153!6.81e-11!129;UBERON:0007811!6.81e-11!129;UBERON:0000369!1.15e-10!4;UBERON:0002435!1.15e-10!4;UBERON:0000204!1.15e-10!4;UBERON:0010082!1.15e-10!4;UBERON:0002420!2.33e-10!9;UBERON:0007245!2.33e-10!9;UBERON:0010009!2.33e-10!9;UBERON:0010011!2.33e-10!9;UBERON:0000454!2.33e-10!9;UBERON:0002020!9.44e-10!34;UBERON:0003528!9.44e-10!34;UBERON:0000349!6.70e-09!5;UBERON:0004121!8.33e-08!169;UBERON:0000924!1.40e-07!173;UBERON:0006601!1.40e-07!173;UBERON:0002791!4.00e-07!33;UBERON:0001893!6.46e-07!34 | |ontology_enrichment_uberon=UBERON:0004733!3.58e-30!12;UBERON:0002028!3.58e-30!12;UBERON:0007277!3.58e-30!12;UBERON:0002680!3.37e-28!9;UBERON:0001895!3.37e-28!9;UBERON:0010092!3.37e-28!9;UBERON:0004732!7.87e-28!13;UBERON:0003076!4.43e-24!15;UBERON:0003057!4.43e-24!15;UBERON:0002616!3.21e-22!59;UBERON:0002298!2.82e-20!8;UBERON:0001049!3.00e-19!57;UBERON:0005068!3.00e-19!57;UBERON:0006241!3.00e-19!57;UBERON:0007135!3.00e-19!57;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0002308!9.87e-18!9;UBERON:0000125!9.87e-18!9;UBERON:0002037!3.69e-16!6;UBERON:0006215!3.69e-16!6;UBERON:0001017!2.33e-15!82;UBERON:0005743!1.41e-14!86;UBERON:0006331!2.77e-14!3;UBERON:0000988!2.96e-14!3;UBERON:0009663!3.72e-13!7;UBERON:0000073!4.69e-13!94;UBERON:0001016!4.69e-13!94;UBERON:0007023!1.02e-12!115;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0002346!1.11e-11!90;UBERON:0000033!1.63e-11!123;UBERON:0002038!2.96e-11!1;UBERON:0009661!2.96e-11!1;UBERON:0001882!5.43e-11!1;UBERON:0005403!5.43e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0000153!6.81e-11!129;UBERON:0007811!6.81e-11!129;UBERON:0000369!1.15e-10!4;UBERON:0002435!1.15e-10!4;UBERON:0000204!1.15e-10!4;UBERON:0010082!1.15e-10!4;UBERON:0002420!2.33e-10!9;UBERON:0007245!2.33e-10!9;UBERON:0010009!2.33e-10!9;UBERON:0010011!2.33e-10!9;UBERON:0000454!2.33e-10!9;UBERON:0002020!9.44e-10!34;UBERON:0003528!9.44e-10!34;UBERON:0000349!6.70e-09!5;UBERON:0004121!8.33e-08!169;UBERON:0000924!1.40e-07!173;UBERON:0006601!1.40e-07!173;UBERON:0002791!4.00e-07!33;UBERON:0001893!6.46e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0004733;5.11e-66;12!UBERON:0002028;5.11e-66;12!UBERON:0004732;4.89e-61;13!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0001896;1.12e-17;3!UBERON:0005290;1.12e-17;3!UBERON:0000073;1.58e-11;53!UBERON:0002616;1.58e-11;53!UBERON:0002298;1.57e-09;6!UBERON:0000955;1.83e-08;68!UBERON:0001016;8.04e-08;83!UBERON:0001017;5.85e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0004733;5.11e-66;12!UBERON:0002028;5.11e-66;12!UBERON:0004732;4.89e-61;13!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0001896;1.12e-17;3!UBERON:0005290;1.12e-17;3!UBERON:0000073;1.58e-11;53!UBERON:0002616;1.58e-11;53!UBERON:0002298;1.57e-09;6!UBERON:0000955;1.83e-08;68!UBERON:0001016;8.04e-08;83!UBERON:0001017;5.85e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0004733,5.11e-66,12;UBERON:0002028,5.11e-66,12;UBERON:0007277,5.11e-66,12;UBERON:0004732,4.89e-61,13;UBERON:0003076,4.60e-53,15;UBERON:0003057,4.60e-53,15;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,16.7839909948792,19.5725290078268,5.91095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,16.7839909948792,19.5725290078268,5.91095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@FRMD6 | |short_description=p27@FRMD6 | ||
}} | }} |
Revision as of 12:06, 18 November 2012
Short description: | p27@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_FRMD6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -265bp_to_ENST00000557405_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
segmental subdivision of hindbrain | 5.11e-66 | 12 |
hindbrain | 5.11e-66 | 12 |
presumptive hindbrain | 5.11e-66 | 12 |
segmental subdivision of nervous system | 4.89e-61 | 13 |
posterior neural tube | 4.60e-53 | 15 |
chordal neural plate | 4.60e-53 | 15 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.