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Coexpression cluster:C62: Difference between revisions

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|tfbs_overrepresentation_for_novel_motifs=1.26875e-05,4.06091e-05,8.74526e-06,1.46712,0.671109,0.865982,0.00424421,1.25362,0.0490572,6.12203e-13,0.000239309,0.0496911,0.00613403,0.0728097,1.35529,0.763868,0.00468732,6.31918,0.000326362,0.0341813,2.07492,0.0044734,0.00156233,5.14904,7.2441e-05,0.00144723,0.462445,0.00396374,0.589376,0.00118906,0.000398161,0.258706,8.03296e-05,0.0106913,1.56059e-06,2.86077e-05,1.08533e-08,0.00523938,0.101682,0.000105323,1.45789,0.00188096,0.371595,1.33242,7.68165e-10,1.73228e-06,0.0043453,0.00419249,0.76052,0.14743,0.00689131,0.0142425,0.000703122,0.0187691,0.178872,0.00351432,1.67439,0.000449052,0.0047425,0.00156261,0.104019,0.000335232,0.190719,0.0127658,0.00214285,0.0235628,1.20988,1.51965,0.38117,0.617688,1.21126e-07,0.28829,1.35006e-15,0.876233,3.82356e-13,0.00196605,0.000701873,0.500526,1.95297,0.930216,1.60278,0.25366,4.08056,0.267994,0.00905106,0,0.415155,0.00213041,0.0277674,0.221309,1.59521,0.036954,1.83071,3.15263,8.6235e-07,0.533884,0.137745,0.0024951,0.011531,0.000531347,1.51741,0.0318243,0.371631,0.325181,0.171163,4.83827e-05,0.000503612,0.358488,0.000700448,2.94012e-07,1.09682,0.113058,0.538784,0.00107402,0.0380953,0.613916,0,0.00678226,0.007505,0.713045,2.00794,0.279237,0.322904,0.131491,1.35124,0.347421,0.519675,0.0101468,0.0846129,0.00779008,0.400176,0.32076,1.44319,0.884845,0.441096,0.00122013,2.09749,1.56762,0.0425858,1.38306,0.708267,0.319377,1.7424,0.807141,0.006688,0.110607,0.23988,0.431783,0.768901,0.00192487,1.81775e-11,0,0.627005,0.0250216,0.312991,0.676737,2.52273,0.88913,0.0285156,0.00346299,0.13529,0.202638,1.94656,0.136466,0.201691,0.828908,0.00331721,1.77811,0
|tfbs_overrepresentation_for_novel_motifs=1.26875e-05,4.06091e-05,8.74526e-06,1.46712,0.671109,0.865982,0.00424421,1.25362,0.0490572,6.12203e-13,0.000239309,0.0496911,0.00613403,0.0728097,1.35529,0.763868,0.00468732,6.31918,0.000326362,0.0341813,2.07492,0.0044734,0.00156233,5.14904,7.2441e-05,0.00144723,0.462445,0.00396374,0.589376,0.00118906,0.000398161,0.258706,8.03296e-05,0.0106913,1.56059e-06,2.86077e-05,1.08533e-08,0.00523938,0.101682,0.000105323,1.45789,0.00188096,0.371595,1.33242,7.68165e-10,1.73228e-06,0.0043453,0.00419249,0.76052,0.14743,0.00689131,0.0142425,0.000703122,0.0187691,0.178872,0.00351432,1.67439,0.000449052,0.0047425,0.00156261,0.104019,0.000335232,0.190719,0.0127658,0.00214285,0.0235628,1.20988,1.51965,0.38117,0.617688,1.21126e-07,0.28829,1.35006e-15,0.876233,3.82356e-13,0.00196605,0.000701873,0.500526,1.95297,0.930216,1.60278,0.25366,4.08056,0.267994,0.00905106,0,0.415155,0.00213041,0.0277674,0.221309,1.59521,0.036954,1.83071,3.15263,8.6235e-07,0.533884,0.137745,0.0024951,0.011531,0.000531347,1.51741,0.0318243,0.371631,0.325181,0.171163,4.83827e-05,0.000503612,0.358488,0.000700448,2.94012e-07,1.09682,0.113058,0.538784,0.00107402,0.0380953,0.613916,0,0.00678226,0.007505,0.713045,2.00794,0.279237,0.322904,0.131491,1.35124,0.347421,0.519675,0.0101468,0.0846129,0.00779008,0.400176,0.32076,1.44319,0.884845,0.441096,0.00122013,2.09749,1.56762,0.0425858,1.38306,0.708267,0.319377,1.7424,0.807141,0.006688,0.110607,0.23988,0.431783,0.768901,0.00192487,1.81775e-11,0,0.627005,0.0250216,0.312991,0.676737,2.52273,0.88913,0.0285156,0.00346299,0.13529,0.202638,1.94656,0.136466,0.201691,0.828908,0.00331721,1.77811,0
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;2.62504,MA0006.1;1.18403e-05,MA0007.1;0.0319609,MA0009.1;1.7221,MA0014.1;0,MA0017.1;0.217937,MA0019.1;1.23999,MA0024.1;0.00799295,MA0025.1;0.376102,MA0027.1;1.00226,MA0028.1;2.87595e-05,MA0029.1;0.175873,MA0030.1;0.27905,MA0031.1;0.420131,MA0038.1;0.90165,MA0040.1;0.949078,MA0041.1;0.529435,MA0042.1;0.595615,MA0043.1;0.173892,MA0046.1;0.478882,MA0048.1;0.150118,MA0050.1;1.25513,MA0051.1;0.410288,MA0052.1;0.96747,MA0055.1;0.167244,MA0056.1;0,MA0057.1;6.32214e-05,MA0058.1;2.72793,MA0059.1;1.57183,MA0060.1;0.0247835,MA0061.1;0.000102087,MA0063.1;0,MA0066.1;0.566268,MA0067.1;0.202822,MA0068.1;0.00198245,MA0069.1;0.694859,MA0070.1;0.65636,MA0071.1;0.387058,MA0072.1;0.261107,MA0073.1;0,MA0074.1;0.0239321,MA0076.1;0.000524237,MA0077.1;0.248,MA0078.1;0.101759,MA0081.1;1.77652,MA0083.1;0.00488262,MA0084.1;0.128024,MA0087.1;0.632984,MA0088.1;0.0182739,MA0089.1;0,MA0090.1;0.31208,MA0091.1;2.96212,MA0092.1;0.581243,MA0093.1;5.37514,MA0095.1;0,MA0098.1;0,MA0100.1;0.0153099,MA0101.1;0.0135171,MA0103.1;5.88365,MA0105.1;2.98592e-06,MA0106.1;0.151974,MA0107.1;0.0266553,MA0108.2;0.411092,MA0109.1;0,MA0111.1;0.725679,MA0113.1;0.063645,MA0114.1;0.0219599,MA0115.1;0.14093,MA0116.1;0.00029444,MA0117.1;0.00674127,MA0119.1;0.0674559,MA0122.1;0.694615,MA0124.1;1.17634,MA0125.1;1.60398,MA0130.1;0,MA0131.1;0.00385782,MA0132.1;0,MA0133.1;0,MA0135.1;1.17205,MA0136.1;0.236566,MA0139.1;7.3926e-05,MA0140.1;1.87115,MA0141.1;0.13213,MA0142.1;5.44157,MA0143.1;1.88482,MA0144.1;0.000707032,MA0145.1;1.60875e-06,MA0146.1;0,MA0147.1;0.168058,MA0148.1;3.05498,MA0149.1;0.245178,MA0062.2;2.99619e-05,MA0035.2;0.967718,MA0039.2;0,MA0138.2;0.10322,MA0002.2;0.679429,MA0137.2;4.02957e-05,MA0104.2;0.0482976,MA0047.2;0.905979,MA0112.2;9.97614e-07,MA0065.2;0.0276903,MA0150.1;0.156838,MA0151.1;0,MA0152.1;0.0892996,MA0153.1;1.51456,MA0154.1;1.59034e-05,MA0155.1;1.48183e-08,MA0156.1;0.0241198,MA0157.1;0.956337,MA0158.1;0,MA0159.1;0.33693,MA0160.1;0.0942088,MA0161.1;0,MA0162.1;0,MA0163.1;0,MA0164.1;0.310684,MA0080.2;0.574369,MA0018.2;0.00359468,MA0099.2;0.677261,MA0079.2;0,MA0102.2;0.146428,MA0258.1;0.174697,MA0259.1;0.000109267,MA0442.1;0
}}
}}

Revision as of 18:12, 22 January 2013


Full id: C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph



Phase1 CAGE Peaks

Hg19::chr10:100981666..100981684,-p@chr10:100981666..100981684
-
Hg19::chr10:101868344..101868349,-p@chr10:101868344..101868349
-
Hg19::chr10:101869561..101869567,-p@chr10:101869561..101869567
-
Hg19::chr10:25481148..25481158,+p@chr10:25481148..25481158
+
Hg19::chr10:26849131..26849135,+p@chr10:26849131..26849135
+
Hg19::chr10:334944..334959,-p@chr10:334944..334959
-
Hg19::chr10:52121805..52121816,-p@chr10:52121805..52121816
-
Hg19::chr10:52121819..52121826,-p@chr10:52121819..52121826
-
Hg19::chr10:69540750..69540753,-p@chr10:69540750..69540753
-
Hg19::chr11:103774907..103774914,-p@chr11:103774907..103774914
-
Hg19::chr11:112367308..112367310,+p@chr11:112367308..112367310
+
Hg19::chr11:11283246..11283251,-p@chr11:11283246..11283251
-
Hg19::chr11:129817440..129817442,-p8@PRDM10
Hg19::chr11:129817448..129817462,-p6@PRDM10
Hg19::chr11:129817471..129817500,-p5@PRDM10
Hg19::chr11:130051279..130051288,-p@chr11:130051279..130051288
-
Hg19::chr11:15432980..15432986,+p@chr11:15432980..15432986
+
Hg19::chr11:23572423..23572438,+p@chr11:23572423..23572438
+
Hg19::chr11:23621457..23621480,+p@chr11:23621457..23621480
+
Hg19::chr11:64914237..64914243,-p@chr11:64914237..64914243
-
Hg19::chr11:67034896..67034903,-p@chr11:67034896..67034903
-
Hg19::chr11:67034925..67034943,-p@chr11:67034925..67034943
-
Hg19::chr11:67035405..67035415,+p@chr11:67035405..67035415
+
Hg19::chr11:67352543..67352552,+p19@GSTP1
Hg19::chr11:67352589..67352592,+p20@GSTP1
Hg19::chr12:125634248..125634257,-p@chr12:125634248..125634257
-
Hg19::chr12:125634284..125634290,-p@chr12:125634284..125634290
-
Hg19::chr12:125634292..125634301,-p@chr12:125634292..125634301
-
Hg19::chr12:129187066..129187076,+p@chr12:129187066..129187076
+
Hg19::chr12:129187221..129187242,+p@chr12:129187221..129187242
+
Hg19::chr12:14253035..14253039,+p@chr12:14253035..14253039
+
Hg19::chr12:15074259..15074300,-p@chr12:15074259..15074300
-
Hg19::chr12:16138073..16138085,+p4@DERA
Hg19::chr12:16138141..16138155,+p7@DERA
Hg19::chr12:25179157..25179161,+p@chr12:25179157..25179161
+
Hg19::chr12:25205064..25205071,+p18@LRMP
Hg19::chr12:25205401..25205418,+p7@LRMP
Hg19::chr12:26868398..26868437,-p6@ITPR2
Hg19::chr12:26868444..26868447,-p19@ITPR2
Hg19::chr12:26868449..26868454,-p17@ITPR2
Hg19::chr12:58109535..58109542,+p24@OS9
Hg19::chr12:6461839..6461847,+p@chr12:6461839..6461847
+
Hg19::chr12:7355941..7355957,+p@chr12:7355941..7355957
+
Hg19::chr12:8765396..8765408,-p2@AICDA
Hg19::chr12:8765415..8765422,-p4@AICDA
Hg19::chr12:8765428..8765439,-p3@AICDA
Hg19::chr12:8765446..8765468,-p1@AICDA
Hg19::chr12:91631072..91631079,-p@chr12:91631072..91631079
-
Hg19::chr12:98417361..98417366,-p@chr12:98417361..98417366
-
Hg19::chr12:98417426..98417460,-p@chr12:98417426..98417460
-
Hg19::chr12:99787858..99787873,+p@chr12:99787858..99787873
+
Hg19::chr13:115099485..115099502,-p1@ENST00000446989
Hg19::chr13:27239085..27239095,+p13@WASF3
Hg19::chr13:27239143..27239158,+p11@WASF3
Hg19::chr13:28674069..28674080,+p@chr13:28674069..28674080
+
Hg19::chr13:29440479..29440487,+p@chr13:29440479..29440487
+
Hg19::chr13:41333181..41333199,-p@chr13:41333181..41333199
-
Hg19::chr13:42077109..42077120,+p@chr13:42077109..42077120
+
Hg19::chr13:58777487..58777534,+p@chr13:58777487..58777534
+
Hg19::chr14:104797982..104798041,+p@chr14:104797982..104798041
+
Hg19::chr14:106321576..106321590,-p4@FJ197674
Hg19::chr14:106325747..106325754,-p@chr14:106325747..106325754
-
Hg19::chr14:106326733..106326743,-p@chr14:106326733..106326743
-
Hg19::chr14:106326747..106326757,-p@chr14:106326747..106326757
-
Hg19::chr14:106326763..106326774,-p@chr14:106326763..106326774
-
Hg19::chr14:106326794..106326802,-p@chr14:106326794..106326802
-
Hg19::chr14:106326978..106327003,-p@chr14:106326978..106327003
-
Hg19::chr14:106327056..106327060,-p@chr14:106327056..106327060
-
Hg19::chr14:107219056..107219081,-p1@Z14221
Hg19::chr14:107219187..107219204,-p1@IGHV3-74
Hg19::chr14:24520595..24520608,+p@chr14:24520595..24520608
+
Hg19::chr14:33449523..33449537,-p@chr14:33449523..33449537
-
Hg19::chr14:33449543..33449553,-p@chr14:33449543..33449553
-
Hg19::chr14:56811687..56811691,+p@chr14:56811687..56811691
+
Hg19::chr14:87529268..87529274,-p@chr14:87529268..87529274
-
Hg19::chr14:91749975..91749987,-p11@CCDC88C
Hg19::chr14:95954255..95954283,+p@chr14:95954255..95954283
+
Hg19::chr14:96126163..96126188,+p@chr14:96126163..96126188
+
Hg19::chr15:101459097..101459145,+p2@LRRK1
Hg19::chr15:35904632..35904672,+p@chr15:35904632..35904672
+
Hg19::chr15:39311432..39311443,+p1@ENST00000560709
Hg19::chr15:53016846..53016851,+p@chr15:53016846..53016851
+
Hg19::chr15:59698319..59698338,-p@chr15:59698319..59698338
-
Hg19::chr16:17076780..17076785,+p@chr16:17076780..17076785
+
Hg19::chr16:30196369..30196406,-p@chr16:30196369..30196406
-
Hg19::chr16:69418649..69418659,-p@chr16:69418649..69418659
-
Hg19::chr16:89165098..89165114,+p4@ACSF3
Hg19::chr17:12859080..12859086,+p@chr17:12859080..12859086
+
Hg19::chr17:38028069..38028081,+p@chr17:38028069..38028081
+
Hg19::chr17:76275686..76275693,+p@chr17:76275686..76275693
+
Hg19::chr18:23713873..23713887,+p2@PSMA8
Hg19::chr18:23713913..23713919,+p3@PSMA8
Hg19::chr18:31407464..31407485,+p@chr18:31407464..31407485
+
Hg19::chr18:57855846..57855854,+p@chr18:57855846..57855854
+
Hg19::chr18:65936829..65936834,+p@chr18:65936829..65936834
+
Hg19::chr18:65936863..65936886,+p@chr18:65936863..65936886
+
Hg19::chr19:19261486..19261492,-p5@MEF2BNB-MEF2B
p5@MEF2B
Hg19::chr19:51837199..51837213,-p@chr19:51837199..51837213
-
Hg19::chr19:51837381..51837388,+p@chr19:51837381..51837388
+
Hg19::chr19:56320807..56320822,-p5@NLRP11
Hg19::chr19:56320849..56320867,-p3@NLRP11
Hg19::chr19:56368793..56368800,+p2@NLRP4
Hg19::chr19:56368803..56368835,+p1@NLRP4
Hg19::chr19:9043461..9043502,-p@chr19:9043461..9043502
-
Hg19::chr1:114414441..114414452,-p5@PTPN22
Hg19::chr1:159582872..159582881,-p@chr1:159582872..159582881
-
Hg19::chr1:161691552..161691563,+p17@FCRLB
Hg19::chr1:177935406..177935409,+p@chr1:177935406..177935409
+
Hg19::chr1:18268554..18268558,-p@chr1:18268554..18268558
-
Hg19::chr1:18297490..18297526,+p@chr1:18297490..18297526
+
Hg19::chr1:185902703..185902710,+p@chr1:185902703..185902710
+
Hg19::chr1:185902712..185902726,+p@chr1:185902712..185902726
+
Hg19::chr1:185902732..185902743,+p@chr1:185902732..185902743
+
Hg19::chr1:222112989..222113017,-p@chr1:222112989..222113017
-
Hg19::chr1:245974415..245974439,-p@chr1:245974415..245974439
-
Hg19::chr1:31896616..31896668,+p@chr1:31896616..31896668
+
Hg19::chr1:40525070..40525096,+p8@CAP1
Hg19::chr1:6614821..6614842,-p3@NOL9
Hg19::chr1:87298222..87298234,-p@chr1:87298222..87298234
-
Hg19::chr1:87298239..87298246,-p@chr1:87298239..87298246
-
Hg19::chr1:9910712..9910738,+p@chr1:9910712..9910738
+
Hg19::chr20:25227346..25227383,+p@chr20:25227346..25227383
+
Hg19::chr20:55841819..55841842,+p2@ENST00000412321
p2@uc010gir.1
Hg19::chr21:19832983..19833012,-p3@TMPRSS15
Hg19::chr21:43256981..43257008,-p2@PRDM15
Hg19::chr21:43283523..43283544,-p3@PRDM15
Hg19::chr22:18077510..18077518,-p@chr22:18077510..18077518
-
Hg19::chr22:22400908..22400921,-p@chr22:22400908..22400921
-
Hg19::chr22:22400945..22400954,-p@chr22:22400945..22400954
-
Hg19::chr22:23205285..23205320,-p@chr22:23205285..23205320
-
Hg19::chr22:23205377..23205398,-p@chr22:23205377..23205398
-
Hg19::chr22:23205439..23205446,-p@chr22:23205439..23205446
-
Hg19::chr22:23324637..23324647,+p@chr22:23324637..23324647
+
Hg19::chr22:27767706..27767718,+p@chr22:27767706..27767718
+
Hg19::chr22:48982101..48982114,-p@chr22:48982101..48982114
-
Hg19::chr2:107281291..107281296,+p@chr2:107281291..107281296
+
Hg19::chr2:120069435..120069474,-p@chr2:120069435..120069474
-
Hg19::chr2:12147660..12147667,+p@chr2:12147660..12147667
+
Hg19::chr2:133035182..133035195,-p@chr2:133035182..133035195
-
Hg19::chr2:137142480..137142487,+p@chr2:137142480..137142487
+
Hg19::chr2:137714780..137714791,+p@chr2:137714780..137714791
+
Hg19::chr2:137714794..137714808,+p@chr2:137714794..137714808
+
Hg19::chr2:150488844..150488852,+p@chr2:150488844..150488852
+
Hg19::chr2:180747197..180747214,-p@chr2:180747197..180747214
-
Hg19::chr2:197041037..197041042,-p14@STK17B
Hg19::chr2:197041044..197041058,-p7@STK17B
Hg19::chr2:231068280..231068287,+p1@ENST00000441657
Hg19::chr2:29358494..29358505,+p@chr2:29358494..29358505
+
Hg19::chr2:30906280..30906285,-p@chr2:30906280..30906285
-
Hg19::chr2:47748862..47748869,-p@chr2:47748862..47748869
-
Hg19::chr2:56564181..56564191,+p@chr2:56564181..56564191
+
Hg19::chr2:56569968..56569982,+p@chr2:56569968..56569982
+
Hg19::chr2:56570003..56570018,+p@chr2:56570003..56570018
+
Hg19::chr2:56570031..56570036,+p@chr2:56570031..56570036
+
Hg19::chr2:56596692..56596701,+p@chr2:56596692..56596701
+
Hg19::chr2:56596717..56596721,+p@chr2:56596717..56596721
+
Hg19::chr2:56596727..56596737,+p@chr2:56596727..56596737
+
Hg19::chr2:60580001..60580044,-p1@ENST00000457668
Hg19::chr2:61096188..61096193,-p@chr2:61096188..61096193
-
Hg19::chr2:61671800..61671824,-p@chr2:61671800..61671824
-
Hg19::chr2:6482125..6482174,-p@chr2:6482125..6482174
-
Hg19::chr2:6919697..6919713,-p@chr2:6919697..6919713
-
Hg19::chr2:6919726..6919729,-p@chr2:6919726..6919729
-
Hg19::chr2:6919744..6919750,-p@chr2:6919744..6919750
-
Hg19::chr2:89100525..89100533,+p3@ANKRD36BP2
Hg19::chr2:89100722..89100728,+p2@ANKRD36BP2
Hg19::chr3:133185620..133185631,+p@chr3:133185620..133185631
+
Hg19::chr3:158679855..158679890,+p21@IQCJ-SCHIP1
p64@SCHIP1
Hg19::chr3:158681022..158681064,+p6@IQCJ
Hg19::chr3:182129952..182129979,-p@chr3:182129952..182129979
-
Hg19::chr3:187662707..187662712,+p1@BC032141
Hg19::chr3:187778533..187778549,-p@chr3:187778533..187778549
-
Hg19::chr3:36966522..36966537,-p@chr3:36966522..36966537
-
Hg19::chr3:36966542..36966566,-p@chr3:36966542..36966566
-
Hg19::chr3:44997222..44997271,-p@chr3:44997222..44997271
-
Hg19::chr3:48264801..48264808,+p8@CAMP
Hg19::chr4:12763497..12763504,-p@chr4:12763497..12763504
-
Hg19::chr4:135309690..135309703,-p@chr4:135309690..135309703
-
Hg19::chr4:146980404..146980417,-p@chr4:146980404..146980417
-
Hg19::chr4:146980425..146980439,-p@chr4:146980425..146980439
-
Hg19::chr4:149904079..149904089,-p@chr4:149904079..149904089
-
Hg19::chr4:154343190..154343236,+p@chr4:154343190..154343236
+
Hg19::chr4:25871127..25871134,-p1@ENST00000503085
Hg19::chr4:35506695..35506702,-p@chr4:35506695..35506702
-
Hg19::chr4:35507955..35507961,+p@chr4:35507955..35507961
+
Hg19::chr4:51561..51600,-p@chr4:51561..51600
-
Hg19::chr4:51618..51621,-p@chr4:51618..51621
-
Hg19::chr4:51655..51662,-p@chr4:51655..51662
-
Hg19::chr4:51729..51736,-p@chr4:51729..51736
-
Hg19::chr4:5678664..5678680,-p@chr4:5678664..5678680
-
Hg19::chr4:59340..59357,+p2@ZNF595
p5@ZNF718
Hg19::chr4:70209404..70209411,-p@chr4:70209404..70209411
-
Hg19::chr4:70216959..70216975,+p@chr4:70216959..70216975
+
Hg19::chr4:81283966..81284005,+p@chr4:81283966..81284005
+
Hg19::chr4:81952607..81952617,+p7@BMP3
Hg19::chr4:8230897..8230923,+p7@SH3TC1
Hg19::chr4:84222549..84222556,-p@chr4:84222549..84222556
-
Hg19::chr4:96115875..96115894,-p@chr4:96115875..96115894
-
Hg19::chr5:100963652..100963657,-p@chr5:100963652..100963657
-
Hg19::chr5:133259888..133259902,-p@chr5:133259888..133259902
-
Hg19::chr5:138725364..138725369,-p6@MZB1
Hg19::chr5:156262100..156262115,-p@chr5:156262100..156262115
-
Hg19::chr5:19269931..19269941,-p@chr5:19269931..19269941
-
Hg19::chr5:30805..30816,+p@chr5:30805..30816
+
Hg19::chr5:54965697..54965711,-p6@SLC38A9
Hg19::chr5:77411169..77411180,-p@chr5:77411169..77411180
-
Hg19::chr5:78065820..78065833,-p27@LHFPL2
Hg19::chr5:78065848..78065859,-p23@LHFPL2
Hg19::chr5:78065881..78065890,-p29@LHFPL2
Hg19::chr6:149188785..149188792,+p@chr6:149188785..149188792
+
Hg19::chr6:159536146..159536155,+p@chr6:159536146..159536155
+
Hg19::chr6:24522825..24522828,+p29@ALDH5A1
Hg19::chr6:24522856..24522861,+p21@ALDH5A1
Hg19::chr6:24522868..24522871,+p28@ALDH5A1
Hg19::chr6:24522893..24522949,+p4@ALDH5A1
Hg19::chr6:24522955..24522965,+p14@ALDH5A1
Hg19::chr6:24522979..24522984,+p25@ALDH5A1
Hg19::chr6:24522988..24522997,+p17@ALDH5A1
Hg19::chr6:24523002..24523015,+p11@ALDH5A1
Hg19::chr6:24523018..24523029,+p16@ALDH5A1
Hg19::chr6:25138806..25138863,-p5@CMAHP
Hg19::chr6:27782825..27782838,+p3@HIST1H2BM
Hg19::chr6:27782876..27782889,+p2@HIST1H2BM
Hg19::chr6:72163942..72163950,+p@chr6:72163942..72163950
+
Hg19::chr6:88889453..88889461,-p@chr6:88889453..88889461
-
Hg19::chr6:88889481..88889506,-p@chr6:88889481..88889506
-
Hg19::chr6:88889533..88889539,-p@chr6:88889533..88889539
-
Hg19::chr6:91080233..91080247,+p@chr6:91080233..91080247
+
Hg19::chr6:9660300..9660311,-p@chr6:9660300..9660311
-
Hg19::chr6:9660328..9660333,-p@chr6:9660328..9660333
-
Hg19::chr6:9660348..9660351,-p@chr6:9660348..9660351
-
Hg19::chr6:9660399..9660405,-p@chr6:9660399..9660405
-
Hg19::chr7:106732075..106732086,+p10@PRKAR2B
Hg19::chr7:11291863..11291872,+p@chr7:11291863..11291872
+
Hg19::chr7:11291896..11291900,+p@chr7:11291896..11291900
+
Hg19::chr7:11291905..11291909,+p@chr7:11291905..11291909
+
Hg19::chr7:11292556..11292577,+p1@ENST00000445839
Hg19::chr7:11292599..11292612,+p2@ENST00000445839
Hg19::chr7:11292615..11292626,+p3@ENST00000445839
Hg19::chr7:117021260..117021301,-p@chr7:117021260..117021301
-
Hg19::chr7:117021550..117021583,-p@chr7:117021550..117021583
-
Hg19::chr7:117022417..117022452,-p@chr7:117022417..117022452
-
Hg19::chr7:118602256..118602267,-p@chr7:118602256..118602267
-
Hg19::chr7:127769466..127769471,+p@chr7:127769466..127769471
+
Hg19::chr7:145507462..145507472,-p@chr7:145507462..145507472
-
Hg19::chr7:145507480..145507504,-p@chr7:145507480..145507504
-
Hg19::chr7:148565495..148565503,-p@chr7:148565495..148565503
-
Hg19::chr7:40847784..40847795,+p8@C7orf10
Hg19::chr7:40850556..40850576,+p@chr7:40850556..40850576
+
Hg19::chr7:40852366..40852377,+p@chr7:40852366..40852377
+
Hg19::chr7:40852383..40852388,+p@chr7:40852383..40852388
+
Hg19::chr7:40852592..40852604,+p@chr7:40852592..40852604
+
Hg19::chr7:40852642..40852647,+p@chr7:40852642..40852647
+
Hg19::chr7:44500020..44500034,-p@chr7:44500020..44500034
-
Hg19::chr7:51836837..51836866,+p@chr7:51836837..51836866
+
Hg19::chr7:55223340..55223353,+p@chr7:55223340..55223353
+
Hg19::chr7:64936940..64936950,+p@chr7:64936940..64936950
+
Hg19::chr7:64940987..64941008,+p@chr7:64940987..64941008
+
Hg19::chr7:87130630..87130638,-p@chr7:87130630..87130638
-
Hg19::chr8:104664867..104664902,+p@chr8:104664867..104664902
+
Hg19::chr8:11016484..11016516,-p@chr8:11016484..11016516
-
Hg19::chr8:11058103..11058113,+p@chr8:11058103..11058113
+
Hg19::chr8:119294336..119294339,+p5@ENST00000366457
Hg19::chr8:119294350..119294369,+p2@ENST00000366457
Hg19::chr8:119314343..119314345,+p@chr8:119314343..119314345
+
Hg19::chr8:119542266..119542274,+p@chr8:119542266..119542274
+
Hg19::chr8:120954370..120954388,+p@chr8:120954370..120954388
+
Hg19::chr8:121925301..121925306,+p1@ENST00000517739
Hg19::chr8:27941359..27941362,-p5@C8orf80
Hg19::chr8:48069320..48069327,-p@chr8:48069320..48069327
-
Hg19::chr8:49585125..49585132,+p@chr8:49585125..49585132
+
Hg19::chr8:62192133..62192141,+p@chr8:62192133..62192141
+
Hg19::chr8:67526476..67526487,-p18@MYBL1
Hg19::chr9:119594733..119594742,+p@chr9:119594733..119594742
+
Hg19::chr9:124761953..124761977,-p@chr9:124761953..124761977
-
Hg19::chr9:16469415..16469429,+p@chr9:16469415..16469429
+
Hg19::chr9:569455..569467,+p21@KANK1
Hg19::chr9:569487..569494,+p64@KANK1
Hg19::chr9:569496..569507,+p45@KANK1
Hg19::chr9:86114019..86114025,-p@chr9:86114019..86114025
-
Hg19::chr9:91921422..91921430,+p@chr9:91921422..91921430
+
Hg19::chr9:95824688..95824709,+p@chr9:95824688..95824709
+
Hg19::chrX:7137234..7137243,+p16@STS
Hg19::chrX:7137256..7137267,+p22@STS
Hg19::chrY:23899174..23899182,-p@chrY:23899174..23899182
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen
lymphocyte of B lineage3.75e-1224
pro-B cell3.75e-1224
Uber Anatomy
Ontology termp-valuen
tonsil4.66e-661
mucosa-associated lymphoid tissue4.66e-661
lymphoid tissue4.66e-661
tonsillar ring4.66e-661
lymphoid system6.56e-0810
chordate pharynx6.56e-0810
pharyngeal region of foregut6.56e-0810
pharynx2.63e-0711
Disease
Ontology termp-valuen
lymphoma2.08e-2710


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.12.62504
MA0006.11.18403e-05
MA0007.10.0319609
MA0009.11.7221
MA0014.10
MA0017.10.217937
MA0019.11.23999
MA0024.10.00799295
MA0025.10.376102
MA0027.11.00226
MA0028.12.87595e-05
MA0029.10.175873
MA0030.10.27905
MA0031.10.420131
MA0038.10.90165
MA0040.10.949078
MA0041.10.529435
MA0042.10.595615
MA0043.10.173892
MA0046.10.478882
MA0048.10.150118
MA0050.11.25513
MA0051.10.410288
MA0052.10.96747
MA0055.10.167244
MA0056.10
MA0057.16.32214e-05
MA0058.12.72793
MA0059.11.57183
MA0060.10.0247835
MA0061.10.000102087
MA0063.10
MA0066.10.566268
MA0067.10.202822
MA0068.10.00198245
MA0069.10.694859
MA0070.10.65636
MA0071.10.387058
MA0072.10.261107
MA0073.10
MA0074.10.0239321
MA0076.10.000524237
MA0077.10.248
MA0078.10.101759
MA0081.11.77652
MA0083.10.00488262
MA0084.10.128024
MA0087.10.632984
MA0088.10.0182739
MA0089.10
MA0090.10.31208
MA0091.12.96212
MA0092.10.581243
MA0093.15.37514
MA0095.10
MA0098.10
MA0100.10.0153099
MA0101.10.0135171
MA0103.15.88365
MA0105.12.98592e-06
MA0106.10.151974
MA0107.10.0266553
MA0108.20.411092
MA0109.10
MA0111.10.725679
MA0113.10.063645
MA0114.10.0219599
MA0115.10.14093
MA0116.10.00029444
MA0117.10.00674127
MA0119.10.0674559
MA0122.10.694615
MA0124.11.17634
MA0125.11.60398
MA0130.10
MA0131.10.00385782
MA0132.10
MA0133.10
MA0135.11.17205
MA0136.10.236566
MA0139.17.3926e-05
MA0140.11.87115
MA0141.10.13213
MA0142.15.44157
MA0143.11.88482
MA0144.10.000707032
MA0145.11.60875e-06
MA0146.10
MA0147.10.168058
MA0148.13.05498
MA0149.10.245178
MA0062.22.99619e-05
MA0035.20.967718
MA0039.20
MA0138.20.10322
MA0002.20.679429
MA0137.24.02957e-05
MA0104.20.0482976
MA0047.20.905979
MA0112.29.97614e-07
MA0065.20.0276903
MA0150.10.156838
MA0151.10
MA0152.10.0892996
MA0153.11.51456
MA0154.11.59034e-05
MA0155.11.48183e-08
MA0156.10.0241198
MA0157.10.956337
MA0158.10
MA0159.10.33693
MA0160.10.0942088
MA0161.10
MA0162.10
MA0163.10
MA0164.10.310684
MA0080.20.574369
MA0018.20.00359468
MA0099.20.677261
MA0079.20
MA0102.20.146428
MA0258.10.174697
MA0259.10.000109267
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BCL11A#53335191.891297006907140.006474361232289160.0281165874979853



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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