NonredundantMotifs:142

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known142
• db :SWISSREGULON
• Id :POU3F1..4.p2
• name  :
• score :0.0499083096501652
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 33.046269 13.763313 71.531797 25.665831 2 59.081902 8.546048 59.876456 16.502804 3 3.798159 12.122525 71.1798040000001 56.906722 4 30.897754 12.652596 99.073151 1.383709 5 134.576526 1.336692 2.895185 5.198807 6 101.527105 1.088274 4.580056 36.811775 7 0.363531 1.467583 1.108087 141.068009 8 31.891998 2.391915 6.552784 103.170513 9 108.197849 15.000047 2.31903 18.490284 10 77.615726 30.604111 34.974266 0.813107 11 117.002649 5.821984 18.607765 2.574812 12 68.741944 25.575918 47.073832 2.615516 13 2.389918 27.642695 10.334816 103.639781 14 40.534458 1.85232 53.107732 48.5127 15 26.757537 37.397105 54.813895 25.038673