NonredundantMotifs:172

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known172
• db :SWISSREGULON
• Id :GZF1.p2
• name  :
• score :0.02784379488307328
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 0.678277 9.171949 6.371559 69.834135 2 3.059487 0 82.996433 0 3 1.570606 79.489634 1.680026 3.315654 4 4.944468 5.793577 73.281977 2.035898 5 3.36156 73.2695 3.059487 6.365373 6 15.416782 7.242432 29.630338 33.766368 7 1.589441 0.680838 8.937115 74.848526 8 25.074942 55.732074 3.136795 2.112109 9 1.51878 11.452488 0 73.084652 10 78.435319 0 3.465387 4.155214 11 0 28.031803 0 58.024117 12 78.309813 1.670628 1.709443 4.366036