NonredundantMotifs:197

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known197
• db :SWISSREGULON
• Id :ZBTB16.p2
• name  :
• score :0.19443196959426917
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 6.353954 70.219248 58.945489 221.293957 2 8.292344 24.064961 25.388361 299.066982 3 127.406121 59.316835 113.518415 56.571277 4 64.474348 37.70863 57.117691 197.511979 5 131.720616 6.224415 2.238855 216.628762 6 43.402208 58.750761 31.811097 222.848582 7 56.721611 40.767912 41.919046 217.404079 8 56.775244 28.666724 140.001467 131.369213 9 125.979164 62.667215 66.815829 101.35044 10 141.584537 54.756069 12.679896 147.792146 11 71.567685 6.635921 130.380918 148.228124 12 58.62353 96.07166 84.404128 117.71333 13 6.992406 3.646797 3.096037 343.077408 14 327.531666 3.062317 11.091839 15.126826 15 350.348686 0.906712 1.450552 4.106698 16 339.646492 1.480485 4.737697 10.947974 17 93.047186 33.369882 135.992922 94.402658 18 58.82549 90.968013 22.685806 184.333339 19 79.424222 19.550309 3.394784 254.443333 20 35.3438 9.774883 57.379429 254.314536 21 78.959605 1.987839 111.697178 164.168026 22 208.36418 2.218561 73.270285 72.959622 23 93.4063789999999 49.293226 19.283613 194.82943 24 33.141906 131.411888 2.907642 189.351212 25 115.356534 0.900617 21.598601 218.956896 26 97.56254 21.847211 152.109435 85.293462 27 56.960341 31.675828 32.105449 236.07103 28 40.038311 21.954129 51.777028 243.04318 29 7.907955 138.384921 55.104528 155.415244