FFCP PHASE1:Hg19::chr10:11784360..11784448,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79746|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23489|TSSclassifier=S|UniProt=Q96DC8,Q5W0J8|association_with_transcript=0bp_to_ENST00000379215,ENST00000420401,ENST00000496136_5end|description=CAGE_peak_1_at_ECHDC3_5end|id=chr10:11784360..11784448,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!3.65e-09!69;UBERON:0000481!1.47e-07!347;UBERON:0001444!2.85e-07!48;UBERON:0004876!3.97e-07!20;UBERON:0000080!5.01e-07!18;UBERON:0002120!5.01e-07!18;UBERON:0004875!5.01e-07!18;UBERON:0005721!5.01e-07!18;UBERON:0005754!5.01e-07!18;UBERON:0007297!5.01e-07!18|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003103,6.30e-09,68;UBERON:0003104,9.83e-08,160;UBERON:0009142,9.83e-08,160;UBERON:0001444,6.99e-07,49|phase1_expression=0.181678379270557,10.2768251467672,4.65149533516705,0,7.59833860526389,3.48935409640147,20.2639902534648,1.89515962028049,11.7533532689927,18.6757791741147,41.8680700783457,0.436882744260345,2.63766978228454,10.2726072956839,10.9361133990212,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,11.0808952269109,12.6480428571437,12.8516435806016,8.01460763966959,9.30746090495612,7.78364365487777,0,0.0821005894499457,0.157421562627358,4.32700704533794,3.83829398097213,3.2511385896376,2.75826367343678,10.2410012384605,4.43704812200145,0,0.284338464974843,6.75281010470149,6.64794490238253,5.01361118675354,1.95309783644267,10.0761963407966,11.6601719766833,14.4242317875144,1.89017710413434,1.51150377475524,0.242584061187816,2.32429036905685,2.87817521615278,1.85823822537062,2.8769239232215,3.58624989140741,1.6553756092201,3.44745680736619,1.93645405075148,1.35426486594342,2.07066573496865,0.818718450173537,1.12361742222542,2.14258724659632,1.92557416245656,0.639337125799041,4.94776950280074,3.19141852194611,2.55734850319616,2.61188314765726,3.97169657283798,0,6.78371396193207,2.08593167368081,2.82345498116652,4.23779651843358,1.84138817993782,1.58231193720442,1.69004229049553,4.25208599930087,2.30624510059213,6.8520464999362,8.40990599912435,4.17886525412408,2.28010194992999,0.99458338599545,1.64397738388171,0,2.73069305631066,1.77901850772711,3.41384178053206,2.40237592221607,3.4485146397269,0.661044872784862,1.90810750907073,2.84606484554724,4.11066032559657,2.29363936875137,2.64342657158052,1.12101712596307,3.95076127162616,0,0.786021525498329,0,0,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0.657751618414705,0.276350017785848,0.289803085735052,0.14828656316206,0.802622484269139,1.04535523804977,0.226618685395132,0,0.68725489096526,0,0.637130828648193,1.30216690771284,3.8018081777935,0.752875595388864,0.383959833463255,0,0.710331756132051,0.821127996921047,0.403213486449465,0,0,14.6284119788377,7.37770945674,12.9141187461966,7.95166135246046,22.560205978615,15.3537310098473,4.7717156823066,5.83961844363163,4.63220604103932,6.87361132133948,6.32410456990508,35.2988608466336,22.5863078741376,7.04490441290416,18.499201438317,17.0647142553282,11.3014266441035,1.66943437013739,1.14398982156026,1.85728750664782,0.993812036833525,0.860234595106124,2.08284300964557,1.13061588384802,0.419499436209906,2.20094433552054,3.13492449805216,1.03366703667732,1.42306505074684,2.34304428935269,4.02829317109147,9.12326526862215,6.34561349625241,0.367663080345869,2.43042584364528,6.42958043645374,6.51135180615892,6.98191178996598,16.8648301212472,0.949265659568129,5.31285057398181,5.27121669744253,7.75560528296651,12.6467275121335,2.48485975847659,3.29239330327907,2.1185468930115,2.0078563452417,2.83734705758686,6.72813120170769,5.33744978648525,2.71334303258876,3.7345324247972,5.79255889899659,2.7788523529288,8.32465852047123,5.18558332031999,14.7622502055292,5.61888138294577,6.84566185853339,4.93180645820944,6.6937664226946,8.41739310714284,8.00569598202816,3.67477508258808,6.63305313483547,6.81950155760052,4.75201142912821,3.95627086845691,10.0117749813183,17.965453545406,6.39677233025452,10.0094815897571,5.26421819419948,3.95079858792754,4.29082914118628,3.00476117813194,6.80593098960126,2.33206526395521,3.63047560991565,2.54318281391474,3.90118424909723,5.25567899116038,3.34932702059318,4.28068769562657,0.675105328965065,0.292311015483596,1.7670364197088,2.20919756741518,3.23292113637624,1.06502877754984,3.02256294682921,4.74769658469365,4.44499962275583,4.90943017063502,3.44165514466805,2.80539524098069,3.04818467139416,2.5562667431294,0.414644220061482,0.756962552626885,0,6.25798129319264,9.00537313470039,2.76269842704961,4.17931135228781,2.16563844500876,1.41968160047813,0.674338760312407,0.482022059766964,0.992645754591546,1.08939722046203,0.71181185733329,1.21348177344148,1.37355025587742,1.53898862778556,9.59602091012043,9.81692416624121,11.1124983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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79746 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23489 | |||
|TSSclassifier=S | |||
|UniProt=Q96DC8,Q5W0J8 | |||
|association_with_transcript=0bp_to_ENST00000379215,ENST00000420401,ENST00000496136_5end | |||
|description=CAGE_peak_1_at_ECHDC3_5end | |||
|id=chr10:11784360..11784448,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!3.65e-09!69;UBERON:0000481!1.47e-07!347;UBERON:0001444!2.85e-07!48;UBERON:0004876!3.97e-07!20;UBERON:0000080!5.01e-07!18;UBERON:0002120!5.01e-07!18;UBERON:0004875!5.01e-07!18;UBERON:0005721!5.01e-07!18;UBERON:0005754!5.01e-07!18;UBERON:0007297!5.01e-07!18 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,6.30e-09,68;UBERON:0003104,9.83e-08,160;UBERON:0009142,9.83e-08,160;UBERON:0001444,6.99e-07,49 | |||
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| |||
|short_description=p1@ECHDC3 | |||
}} |
Revision as of 11:54, 10 September 2013
Short description: | p1@ECHDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ECHDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379215, ENST00000420401, ENST00000496136_5end |
EntrezGene: | ECHDC3 |
HGNC: | 23489 |
UniProt: | Q96DC8Q5W0J8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 6.30e-09 | 68 |
mesenchyme | 9.83e-08 | 160 |
entire embryonic mesenchyme | 9.83e-08 | 160 |
subdivision of head | 6.99e-07 | 49 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.