FFCP PHASE1:Hg19::chr10:124639222..124639278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000416234_5end|description=CAGE_peak_1_at_ENST00000416234_5end|id=chr10:124639222..124639278,+|ontology_enrichment_celltype=CL:0000542!8.62e-14!53;CL:0000051!8.62e-14!53;CL:0000838!2.10e-13!52;CL:0000084!3.97e-10!25;CL:0000827!3.97e-10!25;CL:0000066!8.71e-08!254;CL:0000791!3.05e-07!18;CL:0000789!3.05e-07!18;CL:0002420!3.05e-07!18;CL:0002419!3.05e-07!18;CL:0000790!3.05e-07!18|ontology_enrichment_celltype_v019=CL:0000084;1.12e-11;25!CL:0000542;5.89e-10;53!CL:0000791;4.69e-09;18!CL:0000789;4.69e-09;18!CL:0002419;4.69e-09;18!CL:0000039;5.54e-07;7!CL:0000586;5.54e-07;7|ontology_enrichment_celltype_v019_2=CL:0000542,5.44e-17,53;CL:0000051,5.44e-17,53;CL:0000838,2.11e-16,52;CL:0000084,5.15e-12,25;CL:0000827,5.15e-12,25;CL:0000791,1.97e-09,18;CL:0000789,1.97e-09,18;CL:0002420,1.97e-09,18;CL:0002419,1.97e-09,18;CL:0000790,1.97e-09,18;CL:0000039,3.55e-07,7;CL:0000586,3.55e-07,7;CL:0000625,4.46e-07,11|ontology_enrichment_development_v019=CL:0000051;5.89e-10;53!CL:0000790;4.69e-09;18|ontology_enrichment_disease=DOID:162!6.31e-28!235;DOID:14566!9.88e-28!239;DOID:0050687!1.30e-21!143;DOID:305!3.27e-19!106;DOID:0050686!9.37e-11!137;DOID:1240!2.84e-07!39;DOID:2531!3.67e-07!51;DOID:0060083!3.67e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,5.27e-28,239;DOID:162,6.78e-28,235;DOID:0050687,1.48e-20,143;DOID:305,5.05e-19,106;DOID:0050686,7.86e-10,137;DOID:1240,3.52e-07,39;DOID:2531,7.76e-07,51;DOID:0060083,7.76e-07,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0.85870796139317,1.09499540058307,0.502170558379211,3.59143007015371,3.11982239909794,5.27362234801651,0.393364276848904,0,0.309632246632152,0.919421224478927,0.6024118375565,0,3.87336002901508,0,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,2.73069305631066,1.77901850772711,0.853460445133014,2.00197993518006,0.574752439954483,1.98313461835459,0.954053754535364,0,0.587237189370939,2.6759125968766,0,0,0.526768169550154,1.37696839079683,0.786021525498329,0.616804496998528,2.17342444007882,4.23698946623668,3.78758244587787,7.79306913631645,0.891283655081389,2.06224135232386,2.43687284041983,1.35401931882508,0.768547918354051,1.56071217071854,0.986627427622057,0.552700035571697,0.869409257205157,3.26230438956533,4.81573490561484,3.1360657141493,1.58633079776593,2.29932296161153,1.03088233644789,1.01207876807801,1.91139248594458,1.30216690771284,2.85135613334512,1.80690142893327,1.66382594500744,2.49861453104692,1.89421801635213,0,1.00803371612366,1.33720097891754,2.31719046212478,0,0,0.12786256184353,0.361439152384566,0,0,0,0,1.13441780596881,0.443458794925128,0.702678285545008,0.851363990735132,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,1.47065232138347,0,1.3394959242612,1.12264686313085,1.23872628531654,0,0,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0.570471821544449,0,1.17434498643765,0.647491777472526,0.561803226808994,0.204154171254893,0.859840221182376,0.619954687054593,0,0.494533858557114,0,0,0.336672227908132,1.12606667884768,1.6623846929051,0,0,0.300476117813194,0.113432183160021,1.79389635688862,0,0,0.300091096084402,0.412210116953756,0,0,1.0126579934476,0.487185025805993,0.504867548488229,0.184099797284599,0,0,0.302256294682921,0.508681776931463,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,1.18306800039844,0.168584690078102,0.964044119533928,1.21323370005633,1.08939722046203,0.949082476444386,0.808987848960987,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,1.32438929824395,2.58275720940538,0,0.219500570817251,0,0.603173834469785,1.20364978706088,0.325808305310325,0,0,0.579652024875384,0,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,1.34337784054272,2.3250715081117,0.766765358330422,0.492663237895943,0.264145302039678,0.207328115540772,0.432359860250884,0.25248486685276,0.190493682876507,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0.537182889719687,4.81966119172167,0.788123040807709,1.94064817373566,1.15508732651774,0.254094624222463,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.35142424497814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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000416234_5end | |||
|description=CAGE_peak_1_at_ENST00000416234_5end | |||
|id=chr10:124639222..124639278,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.62e-14!53;CL:0000051!8.62e-14!53;CL:0000838!2.10e-13!52;CL:0000084!3.97e-10!25;CL:0000827!3.97e-10!25;CL:0000066!8.71e-08!254;CL:0000791!3.05e-07!18;CL:0000789!3.05e-07!18;CL:0002420!3.05e-07!18;CL:0002419!3.05e-07!18;CL:0000790!3.05e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.12e-11;25!CL:0000542;5.89e-10;53!CL:0000791;4.69e-09;18!CL:0000789;4.69e-09;18!CL:0002419;4.69e-09;18!CL:0000039;5.54e-07;7!CL:0000586;5.54e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.44e-17,53;CL:0000051,5.44e-17,53;CL:0000838,2.11e-16,52;CL:0000084,5.15e-12,25;CL:0000827,5.15e-12,25;CL:0000791,1.97e-09,18;CL:0000789,1.97e-09,18;CL:0002420,1.97e-09,18;CL:0002419,1.97e-09,18;CL:0000790,1.97e-09,18;CL:0000039,3.55e-07,7;CL:0000586,3.55e-07,7;CL:0000625,4.46e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;5.89e-10;53!CL:0000790;4.69e-09;18 | |||
|ontology_enrichment_disease=DOID:162!6.31e-28!235;DOID:14566!9.88e-28!239;DOID:0050687!1.30e-21!143;DOID:305!3.27e-19!106;DOID:0050686!9.37e-11!137;DOID:1240!2.84e-07!39;DOID:2531!3.67e-07!51;DOID:0060083!3.67e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.27e-28,239;DOID:162,6.78e-28,235;DOID:0050687,1.48e-20,143;DOID:305,5.05e-19,106;DOID:0050686,7.86e-10,137;DOID:1240,3.52e-07,39;DOID:2531,7.76e-07,51;DOID:0060083,7.76e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@ENST00000416234 | |||
}} |
Revision as of 12:09, 10 September 2013
Short description: | p1@ENST00000416234 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000416234_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416234_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.44e-17 | 53 |
common lymphoid progenitor | 5.44e-17 | 53 |
lymphoid lineage restricted progenitor cell | 2.11e-16 | 52 |
T cell | 5.15e-12 | 25 |
pro-T cell | 5.15e-12 | 25 |
mature alpha-beta T cell | 1.97e-09 | 18 |
alpha-beta T cell | 1.97e-09 | 18 |
immature T cell | 1.97e-09 | 18 |
mature T cell | 1.97e-09 | 18 |
immature alpha-beta T cell | 1.97e-09 | 18 |
germ line cell | 3.55e-07 | 7 |
germ cell | 3.55e-07 | 7 |
CD8-positive, alpha-beta T cell | 4.46e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.27e-28 | 239 |
cancer | 6.78e-28 | 235 |
cell type cancer | 1.48e-20 | 143 |
carcinoma | 5.05e-19 | 106 |
organ system cancer | 7.86e-10 | 137 |
leukemia | 3.52e-07 | 39 |
hematologic cancer | 7.76e-07 | 51 |
immune system cancer | 7.76e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.