FFCP PHASE1:Hg19::chr10:70066579..70066613,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64081|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23301|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000478192_5end|coexpression_cluster_id=C211|description=CAGE_peak_4_at_PBLD_5end|id=chr10:70066579..70066613,-|ontology_enrichment_celltype=CL:0000181!2.87e-07!12;CL:0000417!2.87e-07!12;CL:0000668!2.87e-07!12;CL:0000414!2.87e-07!12;CL:0000412!2.87e-07!12;CL:0000182!2.87e-07!12|ontology_enrichment_celltype_v019=CL:0000182;3.25e-08;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.25e-08,12|ontology_enrichment_development_v019=UBERON:0006242;5.70e-11;1!UBERON:0004161;1.17e-08;11!UBERON:0003104;6.30e-08;31!UBERON:0009497;2.12e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.07e-18!27;UBERON:0005409!1.20e-18!35;UBERON:0000059!3.45e-11!11;UBERON:0001155!9.28e-10!9;UBERON:0009854!8.49e-09!23;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0002107!1.90e-08!19;UBERON:0006925!1.90e-08!19;UBERON:0008836!1.90e-08!19;UBERON:0002108!4.59e-08!14;UBERON:0009497!5.21e-08!25;UBERON:0000015!5.21e-08!25;UBERON:0002423!5.21e-08!25;UBERON:0006235!5.21e-08!25;UBERON:0004161!5.21e-08!25;UBERON:0009856!1.27e-07!26;UBERON:0001007!3.73e-07!155;UBERON:0001555!3.73e-07!155;UBERON:0007026!3.73e-07!155;UBERON:0008835!3.76e-07!22;UBERON:0003894!3.76e-07!22;UBERON:0005172!7.65e-07!55;UBERON:0005173!7.65e-07!55;UBERON:0004119!8.27e-07!169;UBERON:0000925!8.27e-07!169;UBERON:0006595!8.27e-07!169;UBERON:0004907!8.32e-07!5|ontology_enrichment_uberon_v019=UBERON:0000160;1.67e-19;17!UBERON:0002108;6.95e-19;4!UBERON:0005409;3.45e-15;22!UBERON:0002423;4.80e-14;25!UBERON:0002107;3.20e-13;19!UBERON:0006925;3.20e-13;19!UBERON:0001155;2.33e-10;9!UBERON:0004921;3.34e-09;33!UBERON:0000059;1.43e-08;11!UBERON:0002365;4.71e-08;31!UBERON:0002330;4.71e-08;31!UBERON:0005172;7.05e-08;52!UBERON:0005173;7.05e-08;52!UBERON:0001007;4.84e-07;81!UBERON:0002368;5.04e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-19,17;UBERON:0002108,7.16e-19,4;UBERON:0009497,4.85e-14,25;UBERON:0000015,4.85e-14,25;UBERON:0002423,4.85e-14,25;UBERON:0006235,4.85e-14,25;UBERON:0004161,4.85e-14,25;UBERON:0005409,2.18e-13,25;UBERON:0002107,3.20e-13,19;UBERON:0006925,3.20e-13,19;UBERON:0008836,3.20e-13,19;UBERON:0008835,2.10e-11,22;UBERON:0003894,2.10e-11,22;UBERON:0005172,6.20e-11,54;UBERON:0005173,6.20e-11,54;UBERON:0009854,6.66e-11,23;UBERON:0001155,2.33e-10,9;UBERON:0007499,5.08e-10,25;UBERON:0002417,9.59e-10,60;UBERON:0000916,9.59e-10,60;UBERON:0009856,1.25e-09,26;UBERON:0000059,1.43e-08,11;UBERON:0004921,1.56e-08,118;UBERON:0002365,4.73e-08,31;UBERON:0002330,4.73e-08,31;UBERON:0001007,5.38e-08,145;UBERON:0001555,5.38e-08,145;UBERON:0007026,5.38e-08,145;UBERON:0000949,1.25e-07,45;UBERON:0002368,4.11e-07,35;UBERON:0004119,4.47e-07,160;UBERON:0000925,4.47e-07,160;UBERON:0006595,4.47e-07,160;UBERON:0005177,8.27e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.822189523018381,0.829050053357545,1.44901542867526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4128365020682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.6450677591337,32.4332981503617,20.6776467338491,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4461080068165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4566310843012,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,10.2610774823873,7.94339188413713,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,32.6674933331392,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,1.06726497369676,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,36.3294310649304,9.75655339310965,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3794020620548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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64081 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23301 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000478192_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_4_at_PBLD_5end | |||
|id=chr10:70066579..70066613,- | |||
|ontology_enrichment_celltype=CL:0000181!2.87e-07!12;CL:0000417!2.87e-07!12;CL:0000668!2.87e-07!12;CL:0000414!2.87e-07!12;CL:0000412!2.87e-07!12;CL:0000182!2.87e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.25e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.25e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.70e-11;1!UBERON:0004161;1.17e-08;11!UBERON:0003104;6.30e-08;31!UBERON:0009497;2.12e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.07e-18!27;UBERON:0005409!1.20e-18!35;UBERON:0000059!3.45e-11!11;UBERON:0001155!9.28e-10!9;UBERON:0009854!8.49e-09!23;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0002107!1.90e-08!19;UBERON:0006925!1.90e-08!19;UBERON:0008836!1.90e-08!19;UBERON:0002108!4.59e-08!14;UBERON:0009497!5.21e-08!25;UBERON:0000015!5.21e-08!25;UBERON:0002423!5.21e-08!25;UBERON:0006235!5.21e-08!25;UBERON:0004161!5.21e-08!25;UBERON:0009856!1.27e-07!26;UBERON:0001007!3.73e-07!155;UBERON:0001555!3.73e-07!155;UBERON:0007026!3.73e-07!155;UBERON:0008835!3.76e-07!22;UBERON:0003894!3.76e-07!22;UBERON:0005172!7.65e-07!55;UBERON:0005173!7.65e-07!55;UBERON:0004119!8.27e-07!169;UBERON:0000925!8.27e-07!169;UBERON:0006595!8.27e-07!169;UBERON:0004907!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.67e-19;17!UBERON:0002108;6.95e-19;4!UBERON:0005409;3.45e-15;22!UBERON:0002423;4.80e-14;25!UBERON:0002107;3.20e-13;19!UBERON:0006925;3.20e-13;19!UBERON:0001155;2.33e-10;9!UBERON:0004921;3.34e-09;33!UBERON:0000059;1.43e-08;11!UBERON:0002365;4.71e-08;31!UBERON:0002330;4.71e-08;31!UBERON:0005172;7.05e-08;52!UBERON:0005173;7.05e-08;52!UBERON:0001007;4.84e-07;81!UBERON:0002368;5.04e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-19,17;UBERON:0002108,7.16e-19,4;UBERON:0009497,4.85e-14,25;UBERON:0000015,4.85e-14,25;UBERON:0002423,4.85e-14,25;UBERON:0006235,4.85e-14,25;UBERON:0004161,4.85e-14,25;UBERON:0005409,2.18e-13,25;UBERON:0002107,3.20e-13,19;UBERON:0006925,3.20e-13,19;UBERON:0008836,3.20e-13,19;UBERON:0008835,2.10e-11,22;UBERON:0003894,2.10e-11,22;UBERON:0005172,6.20e-11,54;UBERON:0005173,6.20e-11,54;UBERON:0009854,6.66e-11,23;UBERON:0001155,2.33e-10,9;UBERON:0007499,5.08e-10,25;UBERON:0002417,9.59e-10,60;UBERON:0000916,9.59e-10,60;UBERON:0009856,1.25e-09,26;UBERON:0000059,1.43e-08,11;UBERON:0004921,1.56e-08,118;UBERON:0002365,4.73e-08,31;UBERON:0002330,4.73e-08,31;UBERON:0001007,5.38e-08,145;UBERON:0001555,5.38e-08,145;UBERON:0007026,5.38e-08,145;UBERON:0000949,1.25e-07,45;UBERON:0002368,4.11e-07,35;UBERON:0004119,4.47e-07,160;UBERON:0000925,4.47e-07,160;UBERON:0006595,4.47e-07,160;UBERON:0005177,8.27e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.822189523018381,0.829050053357545,1.44901542867526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4128365020682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.6450677591337,32.4332981503617,20.6776467338491,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4461080068165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4566310843012,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,10.2610774823873,7.94339188413713,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,32.6674933331392,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,1.06726497369676,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,36.3294310649304,9.75655339310965,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3794020620548,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03362610109783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,27.937045235076,53.7656518839735,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,20.6320467801006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@PBLD | |||
}} |
Revision as of 14:03, 10 September 2013
Short description: | p4@PBLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PBLD_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000478192_5end |
EntrezGene: | PBLD |
HGNC: | 23301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.25e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.70e-19 | 17 |
small intestine | 7.16e-19 | 4 |
epithelium of foregut-midgut junction | 4.85e-14 | 25 |
anatomical boundary | 4.85e-14 | 25 |
hepatobiliary system | 4.85e-14 | 25 |
foregut-midgut junction | 4.85e-14 | 25 |
septum transversum | 4.85e-14 | 25 |
gastrointestinal system | 2.18e-13 | 25 |
liver | 3.20e-13 | 19 |
digestive gland | 3.20e-13 | 19 |
liver bud | 3.20e-13 | 19 |
hepatic diverticulum | 2.10e-11 | 22 |
liver primordium | 2.10e-11 | 22 |
abdomen element | 6.20e-11 | 54 |
abdominal segment element | 6.20e-11 | 54 |
digestive tract diverticulum | 6.66e-11 | 23 |
colon | 2.33e-10 | 9 |
epithelial sac | 5.08e-10 | 25 |
abdominal segment of trunk | 9.59e-10 | 60 |
abdomen | 9.59e-10 | 60 |
sac | 1.25e-09 | 26 |
large intestine | 1.43e-08 | 11 |
subdivision of digestive tract | 1.56e-08 | 118 |
exocrine gland | 4.73e-08 | 31 |
exocrine system | 4.73e-08 | 31 |
digestive system | 5.38e-08 | 145 |
digestive tract | 5.38e-08 | 145 |
primitive gut | 5.38e-08 | 145 |
endocrine system | 1.25e-07 | 45 |
endocrine gland | 4.11e-07 | 35 |
endoderm-derived structure | 4.47e-07 | 160 |
endoderm | 4.47e-07 | 160 |
presumptive endoderm | 4.47e-07 | 160 |
trunk region element | 8.27e-07 | 101 |
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