FFCP PHASE1:Hg19::chr11:102980255..102980304,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2962|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000398093_5end|coexpression_cluster_id=C3072|description=CAGE_peak_1_at_DYNC2H1_5end|id=chr11:102980255..102980304,+|ontology_enrichment_celltype=CL:0000055!1.35e-21!180;CL:0000057!1.44e-09!75;CL:0002620!1.38e-07!23;CL:0000680!3.15e-07!57;CL:0000056!3.15e-07!57;CL:0000355!3.15e-07!57|ontology_enrichment_celltype_v019=CL:0002620;1.21e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,5.56e-10,76;CL:0002620,9.50e-08,23;CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.87e-11!365;UBERON:0003102!1.48e-10!95;UBERON:0000914!4.34e-09!83;UBERON:0002329!4.34e-09!83;UBERON:0003077!4.34e-09!83;UBERON:0003059!4.34e-09!83;UBERON:0007282!4.34e-09!83;UBERON:0009618!4.34e-09!83;UBERON:0007285!4.34e-09!83;UBERON:0000468!1.37e-08!659;UBERON:0000481!6.28e-08!347;UBERON:0000924!1.30e-07!173;UBERON:0006601!1.30e-07!173;UBERON:0000486!2.24e-07!82;UBERON:0004290!5.48e-07!70;UBERON:0000922!5.74e-07!612|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.63e-10,99;UBERON:0000486,9.56e-08,83;UBERON:0007524,1.59e-07,73;UBERON:0002329,2.23e-07,71;UBERON:0003059,2.23e-07,71;UBERON:0007282,2.23e-07,71;UBERON:0004290,2.23e-07,71;UBERON:0009618,2.23e-07,71;UBERON:0003077,2.35e-07,72;UBERON:0007285,2.35e-07,72;UBERON:0004121,4.82e-07,171;UBERON:0000924,4.82e-07,171;UBERON:0006601,4.82e-07,171|phase1_expression=6.90377841228115,3.8538094300377,10.9944435194858,3.00219895059391,7.15137751083661,4.36169262050184,2.53299878168311,5.05375898741465,3.65659879479774,1.96587149201207,0,1.31064823278103,0.527533956456907,18.8124856499271,11.5989081504771,6.05092631806598,5.42425075221579,5.11217063271161,4.87932798790507,5.17108443922509,1.02000345622126,0.313454721478088,7.15589967827642,7.8018422291544,4.2684497462233,0,0,0,0,0.767658796194425,0.464448369948228,1.83884244895785,1.8072355126695,1.47901604066715,0,1.27952309238679,0,1.66198622559563,0.200544447470142,0.651032612147555,2.01523926815932,2.26725566213286,2.06060454107349,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.709446689665756,1.03423704220986,0,0,0.376484679085209,0,0.674170453335254,0.918251677112708,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,1.4882300997553,0.209658645508376,3.48218756554135,1.20141514273205,0.964353520182481,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0,0.590129310341499,0,0.616804496998528,0,0,0.473447805734733,0,0.779873198196215,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0,0,0,0.453237370790265,0.766440987203842,0,0,0.318565414324097,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0.821127996921047,0.604820229674197,0.267440195783507,0.579297615531196,17.0664806419773,7.37770945674,7.41602858692476,8.67453965722959,3.50936537445123,7.9665585428453,3.1811437882044,4.86634870302636,16.0709189178915,10.1995522832779,10.1010003547095,1.83370705696798,4.00724817121796,1.48313777113772,0,0,0.132957960518865,0.953962497221368,0,0.371457501329565,1.19257444420023,1.72046919021225,0,0,0.838998872419812,1.10047216776027,0.417989933073621,0.775250277507987,1.42306505074684,1.67360306382335,0,0.760272105718513,0,2.94130464276695,0,2.41109266367015,1.12264686313085,1.91439516821648,0,0.949265659568129,0.549605231791222,0,0,1.3082821564276,6.46063537203914,6.58478660655815,58.3924487386295,57.3673241497627,6.73869926176878,2.80338800071154,1.06748995729705,2.4666754841716,25.5193049027808,7.54379763590253,9.80771418680752,3.48122083583342,6.91411109375999,3.51482147750695,7.49184184392769,1.71141546463335,7.77133138869366,17.2628713006334,16.9966591586538,14.6068838970338,28.3774298044302,14.7401180774122,16.8421023316498,9.50402285825643,3.95627086845691,0,0,17.1702836233148,15.5146964641236,14.9614622361459,3.07284334616587,3.0648779579902,7.66214100423644,2.94923676216055,16.6832361190642,5.55249210928275,3.81477422087211,21.606558918077,10.5113579823208,20.0959621235591,5.95573940261087,32.9113847870469,8.67189345934668,30.2920529092937,9.38908966151453,35.238840386501,24.1406522911298,6.44813428656898,3.22165125389926,2.89891279744945,8.45512973831587,6.02289650316908,11.0996072577932,11.3975600756477,9.76029120103954,8.60386756627575,8.07426722802011,9.85438869504741,4.69348596989448,2.57296375277154,1.38134921352481,5.57241513638375,5.0531563716871,1.30137480043828,1.18009283054671,1.20505514941741,0.661763836394364,1.08939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0|short_description=p1@DYNC2H1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2962 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000398093_5end | |||
|coexpression_cluster_id=C3072 | |||
|description=CAGE_peak_1_at_DYNC2H1_5end | |||
|id=chr11:102980255..102980304,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-21!180;CL:0000057!1.44e-09!75;CL:0002620!1.38e-07!23;CL:0000680!3.15e-07!57;CL:0000056!3.15e-07!57;CL:0000355!3.15e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.21e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.56e-10,76;CL:0002620,9.50e-08,23;CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.87e-11!365;UBERON:0003102!1.48e-10!95;UBERON:0000914!4.34e-09!83;UBERON:0002329!4.34e-09!83;UBERON:0003077!4.34e-09!83;UBERON:0003059!4.34e-09!83;UBERON:0007282!4.34e-09!83;UBERON:0009618!4.34e-09!83;UBERON:0007285!4.34e-09!83;UBERON:0000468!1.37e-08!659;UBERON:0000481!6.28e-08!347;UBERON:0000924!1.30e-07!173;UBERON:0006601!1.30e-07!173;UBERON:0000486!2.24e-07!82;UBERON:0004290!5.48e-07!70;UBERON:0000922!5.74e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.63e-10,99;UBERON:0000486,9.56e-08,83;UBERON:0007524,1.59e-07,73;UBERON:0002329,2.23e-07,71;UBERON:0003059,2.23e-07,71;UBERON:0007282,2.23e-07,71;UBERON:0004290,2.23e-07,71;UBERON:0009618,2.23e-07,71;UBERON:0003077,2.35e-07,72;UBERON:0007285,2.35e-07,72;UBERON:0004121,4.82e-07,171;UBERON:0000924,4.82e-07,171;UBERON:0006601,4.82e-07,171 | |||
|phase1_expression=6.90377841228115,3.8538094300377,10.9944435194858,3.00219895059391,7.15137751083661,4.36169262050184,2.53299878168311,5.05375898741465,3.65659879479774,1.96587149201207,0,1.31064823278103,0.527533956456907,18.8124856499271,11.5989081504771,6.05092631806598,5.42425075221579,5.11217063271161,4.87932798790507,5.17108443922509,1.02000345622126,0.313454721478088,7.15589967827642,7.8018422291544,4.2684497462233,0,0,0,0,0.767658796194425,0.464448369948228,1.83884244895785,1.8072355126695,1.47901604066715,0,1.27952309238679,0,1.66198622559563,0.200544447470142,0.651032612147555,2.01523926815932,2.26725566213286,2.06060454107349,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.709446689665756,1.03423704220986,0,0,0.376484679085209,0,0.674170453335254,0.918251677112708,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,1.4882300997553,0.209658645508376,3.48218756554135,1.20141514273205,0.964353520182481,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0,0.590129310341499,0,0.616804496998528,0,0,0.473447805734733,0,0.779873198196215,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0,0,0,0.453237370790265,0.766440987203842,0,0,0.318565414324097,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0.821127996921047,0.604820229674197,0.267440195783507,0.579297615531196,17.0664806419773,7.37770945674,7.41602858692476,8.67453965722959,3.50936537445123,7.9665585428453,3.1811437882044,4.86634870302636,16.0709189178915,10.1995522832779,10.1010003547095,1.83370705696798,4.00724817121796,1.48313777113772,0,0,0.132957960518865,0.953962497221368,0,0.371457501329565,1.19257444420023,1.72046919021225,0,0,0.838998872419812,1.10047216776027,0.417989933073621,0.775250277507987,1.42306505074684,1.67360306382335,0,0.760272105718513,0,2.94130464276695,0,2.41109266367015,1.12264686313085,1.91439516821648,0,0.949265659568129,0.549605231791222,0,0,1.3082821564276,6.46063537203914,6.58478660655815,58.3924487386295,57.3673241497627,6.73869926176878,2.80338800071154,1.06748995729705,2.4666754841716,25.5193049027808,7.54379763590253,9.80771418680752,3.48122083583342,6.91411109375999,3.51482147750695,7.49184184392769,1.71141546463335,7.77133138869366,17.2628713006334,16.9966591586538,14.6068838970338,28.3774298044302,14.7401180774122,16.8421023316498,9.50402285825643,3.95627086845691,0,0,17.1702836233148,15.5146964641236,14.9614622361459,3.07284334616587,3.0648779579902,7.66214100423644,2.94923676216055,16.6832361190642,5.55249210928275,3.81477422087211,21.606558918077,10.5113579823208,20.0959621235591,5.95573940261087,32.9113847870469,8.67189345934668,30.2920529092937,9.38908966151453,35.238840386501,24.1406522911298,6.44813428656898,3.22165125389926,2.89891279744945,8.45512973831587,6.02289650316908,11.0996072577932,11.3975600756477,9.76029120103954,8.60386756627575,8.07426722802011,9.85438869504741,4.69348596989448,2.57296375277154,1.38134921352481,5.57241513638375,5.0531563716871,1.30137480043828,1.18009283054671,1.20505514941741,0.661763836394364,1.08939722046203,1.42362371466658,0.943819157121151,0.784885860501384,1.53898862778556,0,0,1.2347220339942,0,0,0,1.77236972004421,0.882926198829301,1.10689594688802,10.4656364282101,12.5115325365833,4.49607013030478,6.43385423434437,11.5735556448162,5.2129328849652,0,4.3299402607582,4.63721619900307,6.22266079449855,0,0.462985512576611,0.380508304469197,0,0,1.96973604869918,0.234004265139238,1.18904929830983,3.74935335947108,3.69560682037491,5.52922879245307,14.0606880643472,11.3347236020445,3.83382679165211,0,1.23267807618516,3.10992173311158,5.18831832301061,4.67097003677606,7.42925363218378,1.90994212779139,4.68869788840188,0,9.76861180681573,14.1161237186641,9.1464458441785,3.47606361470618,3.48768055066624,5.4270331507503,9.56610696607556,7.15312891703765,4.22651376278,8.51001973071586,4.16029747645464,2.05765899409714,1.41849132023278,1.8649552531127,8.57867961948885,1.08524321078289,1.64648067356154,11.4007664502807,7.46323092359346,3.95975936466715,8.13886318060882,9.58686804460323,4.59875759437462,0,1.50677127429638,0,7.18874566474748,3.44585807502342,7.13184525203592,12.740754986747,12.1231030304726,12.7133283900326,0.112085143993527,0.985153801009636,0.431255149719035,1.15508732651774,12.9588258353456,2.60279707715243,0.773288812777695,2.17771144934653,2.55175500661265,0,0,0.414415513436035,16.9314258572413,6.5022167737758,9.76554085319048,5.61521326133179,4.46072471992904,7.88512075169673,3.98280810975225,7.22270639346525,0,4.1389228517002,6.64225598535437,1.10621501125022,23.4585759063824,2.54541504701563,0.686286847621712,0.620304078368662,0.647142602455851,0.320182673410333,0.303127571446259,4.99306318531491,0.30239029332968,9.17998888929474,12.1234958897569,4.2099014164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| |||
|short_description=p1@DYNC2H1 | |||
}} |
Revision as of 15:24, 10 September 2013
Short description: | p1@DYNC2H1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DYNC2H1_5end |
Coexpression cluster: | C3072_epidermoid_Fibroblast_neuroectodermal_Small_Skeletal_Smooth_embryonic |
Association with transcript: | 0bp_to_ENST00000398093_5end |
EntrezGene: | DYNC2H1 |
HGNC: | 2962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.56e-10 | 76 |
skin fibroblast | 9.50e-08 | 23 |
muscle precursor cell | 1.30e-07 | 58 |
myoblast | 1.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.30e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.63e-10 | 99 |
multilaminar epithelium | 9.56e-08 | 83 |
dense mesenchyme tissue | 1.59e-07 | 73 |
somite | 2.23e-07 | 71 |
presomitic mesoderm | 2.23e-07 | 71 |
presumptive segmental plate | 2.23e-07 | 71 |
dermomyotome | 2.23e-07 | 71 |
trunk paraxial mesoderm | 2.23e-07 | 71 |
paraxial mesoderm | 2.35e-07 | 72 |
presumptive paraxial mesoderm | 2.35e-07 | 72 |
ectoderm-derived structure | 4.82e-07 | 171 |
ectoderm | 4.82e-07 | 171 |
presumptive ectoderm | 4.82e-07 | 171 |
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