FFCP PHASE1:Hg19::chr11:114271367..114271401,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10179|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9904|TSSclassifier=S|UniProt=F5H606,F5GY08,G3V1T9,Q9Y580|association_with_transcript=0bp_to_ENST00000542140,ENST00000544582,ENST00000545678,NM_016090,uc001pov.2,uc001pow.2,uc001pox.2_5end|description=CAGE_peak_2_at_RBM7_5end|id=chr11:114271367..114271401,+|ontology_enrichment_celltype=CL:0000860!1.00e-09!45;CL:0000766!1.11e-09!76;CL:0002057!3.10e-09!42;CL:0000557!3.72e-07!71;CL:0000839!6.53e-07!70|ontology_enrichment_celltype_v019=CL:0000860;1.91e-11;33!CL:0002057;1.91e-11;33!CL:0000473;2.82e-07;39!CL:0000234;2.82e-07;39|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-09,42;CL:0002057,3.10e-09,42;CL:0000766,3.53e-09,72;CL:0000473,5.45e-07,48;CL:0000234,5.45e-07,48|ontology_enrichment_development_v019=CL:0002057;2.37e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.52e-07!375;UBERON:0004765!6.35e-07!101;UBERON:0001434!6.35e-07!101;UBERON:0002371!6.69e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.75e-07,90;UBERON:0001434,6.09e-07,100;UBERON:0002384,6.92e-07,371|phase1_expression=5.26867299884614,7.06531728840244,7.04772020479856,5.00366491765652,8.93922188854576,5.23403114460221,10.1319951267324,3.79031924056099,4.44015567939725,1.96587149201207,2.09340350391728,4.36882744260345,2.63766978228454,10.520140001604,6.95934489028623,7.39557661096953,6.02694528023977,2.92124036154949,8.29485757943862,3.69363174230364,4.28401451612931,1.88072832886853,9.73202356245593,10.4024563055392,13.9352329950231,5.34893840235659,6.40384597709577,5.74588703589859,8.65401409067589,10.3633937486247,12.8497382352343,6.43594857135249,1.8072355126695,3.69754010166788,4.9579008371393,3.2698923472107,8.80801318004542,6.64794490238253,7.62068900386538,7.81239134577067,6.04571780447796,5.18229865630367,6.69696475848885,10.3232749533491,11.3362783106643,6.54976965207104,11.1565937714729,13.1573724166984,10.8397229813286,15.8230815777183,15.8819638048042,17.7361672416439,12.0660988257816,22.5919639254339,18.9597081232078,10.9180556934711,11.7349644524874,15.2811969422658,13.7737751566906,10.5906578935111,8.31138263538754,9.89553900560148,17.5528018707036,14.0654167675789,13.930043454172,7.94339314567596,11.8336227309159,18.3411525637423,21.3807996552283,24.9767171410884,10.2917915447673,13.2579948955523,15.8231193720442,4.43636101255078,5.31510749912609,6.49941801075965,4.83013113929929,4.50530678524519,6.42902346788321,4.84521664360123,2.58591680358817,3.83594722905731,1.75996244461323,4.91524750135918,6.22656477704488,4.69403244823158,2.80277190925209,5.74752439954483,3.30522436392431,9.54053754535364,7.39976859842283,7.04684627245127,8.02773779062981,6.60856642895129,9.52864557068611,7.11137028892708,10.0321982758055,7.8602152549833,5.75684197198626,4.34684888015763,12.71096839871,11.3627473376336,7.79306913631645,3.34231370655521,5.00830042707223,4.43067789167242,4.87446954777028,3.33037431286755,2.34106825607781,3.12432018746985,2.76350017785848,3.18783394308558,9.04548035288569,8.56130649887082,4.18142095219907,4.07913633711238,7.66440987203842,3.4362744548263,6.07247260846807,0.95569624297229,4.55758417699493,1.90090408889675,5.87242964403314,5.75939750194883,0,3.31488152861624,0,7.05623601286563,4.27904313253612,8.97911304073354,4.87613732627923,6.70700859703636,15.3435074212236,8.31310050484502,2.00535164254356,7.53201898596283,7.95285947051099,11.1926020169606,8.88627281342238,7.09534071880205,8.16863506946072,4.97720486891308,1.45718115317017,0.370784442784429,2.27183175558278,2.78607579678828,4.12169677608482,15.2633999555419,14.2998727695032,18.2014175651487,3.37896092523399,2.58070378531837,2.42998351125316,1.13061588384802,5.03399323451887,4.95212475492121,2.92592953151535,5.94358546089456,6.04802646567407,9.70689777017544,4.43112248820062,4.56163263431108,6.34561349625241,4.41195696415042,8.1014194788176,4.82218532734031,4.04152870727106,4.27923625836624,7.66583187329416,4.74632829784064,3.48083313467774,14.495845917967,23.2668158488995,1.3082821564276,13.4182426957736,8.48424428152684,9.79827938017819,5.73673241497627,8.86670955495893,8.41016400213461,5.33744978648525,8.38669664618344,16.4941848761876,7.67850830797222,6.86539993076527,3.63257826347835,5.18558332031999,5.15507150034353,7.49184184392769,2.85235910772225,4.63290909710583,7.51580791320095,7.44615544093405,8.00569598202816,6.53293348015658,7.00155608677077,8.26606249406124,5.94001428641027,4.69807165629258,0.910161361938026,2.87447256726495,4.71341119071385,6.75640007308606,8.58898758000967,10.9744405220209,6.12975591598039,6.91095070970345,8.28054937068154,8.07253360599879,12.3863285514769,12.5039821684141,6.30191301777245,13.0876712132817,7.47157566132325,12.0975956615533,10.801685263441,13.8360547328902,11.8643873894734,9.20498986422994,17.9427123068881,9.9402685904652,12.3925080819998,6.44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993,0.647428837187895,7.08373367308104,5.799072156691,5.82853191670967,10.0593969288705,4.97376937903421,3.44868263254949,8.470956152922,6.0467284209986,16.7568756359008,8.33480907565802,8.96094198066225,2.35158648180761,6.61900468735545,4.47785439493089,3.14093547383912,11.5848096127564,5.4945244585842,12.4046793722106,6.20293858667034,3.99638905436179,4.59729317254673,7.1421575442263,2.11736923029415,4.41327516790425,5.84269110597214,1.37618785021362,8.74371457223853,4.41760374140917,1.97175321553653,2.18175345170189,3.7031878836078,12.6478306176695,10.6300394585226,8.65253124247578,17.537133052076,12.7840719197524,6.46162355158329,13.5645143556836,12.5592180474813,23.9845687785945,4.011320628678,8.10832070935162,4.01946195234268,3.31667775783512,7.55060869791835,5.11761556562354,9.76064169001335,9.88210320490894,7.32481628691123,11.2131862580613,8.97424931722125,8.48892193624521,3.04803447055746,8.55583252713203,4.91669987006489,8.39149803094313,9.31448998328838,5.45401899693529,11.9534627383041,11.5843369372164,11.0484998591102,9.38563769613817,8.80138398116638,9.35861210126198,4.66029741929859,4.6292972525936,2.56454793842586|short_description=p2@RBM7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9904 | |||
|TSSclassifier=S | |||
|UniProt=F5H606,F5GY08,G3V1T9,Q9Y580 | |||
|association_with_transcript=0bp_to_ENST00000542140,ENST00000544582,ENST00000545678,NM_016090,uc001pov.2,uc001pow.2,uc001pox.2_5end | |||
|description=CAGE_peak_2_at_RBM7_5end | |||
|id=chr11:114271367..114271401,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.00e-09!45;CL:0000766!1.11e-09!76;CL:0002057!3.10e-09!42;CL:0000557!3.72e-07!71;CL:0000839!6.53e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-11;33!CL:0002057;1.91e-11;33!CL:0000473;2.82e-07;39!CL:0000234;2.82e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-09,42;CL:0002057,3.10e-09,42;CL:0000766,3.53e-09,72;CL:0000473,5.45e-07,48;CL:0000234,5.45e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.52e-07!375;UBERON:0004765!6.35e-07!101;UBERON:0001434!6.35e-07!101;UBERON:0002371!6.69e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.75e-07,90;UBERON:0001434,6.09e-07,100;UBERON:0002384,6.92e-07,371 | |||
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| |||
|short_description=p2@RBM7 | |||
}} |
Revision as of 15:49, 10 September 2013
Short description: | p2@RBM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RBM7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542140, ENST00000544582, ENST00000545678, NM_016090, uc001pov.2, uc001pow.2, uc001pox.2_5end |
EntrezGene: | RBM7 |
HGNC: | 9904 |
UniProt: | F5H606F5GY08G3V1T9Q9Y580 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.10e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-09 | 42 |
myeloid leukocyte | 3.53e-09 | 72 |
defensive cell | 5.45e-07 | 48 |
phagocyte | 5.45e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 5.75e-07 | 90 |
skeletal system | 6.09e-07 | 100 |
connective tissue | 6.92e-07 | 371 |
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