FFCP PHASE1:Hg19::chr11:22850896..22850912,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=258010|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25238|TSSclassifier=S|UniProt=|association_with_transcript=6bp_to_ENST00000530199_5end|description=CAGE_peak_3_at_SVIP_5end|id=chr11:22850896..22850912,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000817;2.13e-07;1|ontology_enrichment_celltype_v019_2=CL:0002032,1.79e-08,161;CL:0000837,1.79e-08,161;CL:0000988,1.87e-08,177;CL:0000037,5.66e-08,168|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!5.62e-20!39;DOID:8692!5.29e-18!31;DOID:2531!3.14e-17!51;DOID:0060083!3.14e-17!51;DOID:14566!2.27e-16!239;DOID:162!6.87e-16!235;DOID:0050686!4.47e-11!137|ontology_enrichment_disease_v019=DOID:1240;1.11e-23;39!DOID:8692;3.04e-20;31!DOID:2531;2.35e-17;51!DOID:0060083;2.35e-17;51!DOID:8552;2.13e-07;1!DOID:225;2.13e-07;1|ontology_enrichment_disease_v019_2=DOID:1240,9.41e-28,39;DOID:2531,7.73e-24,51;DOID:0060083,7.73e-24,51;DOID:8692,7.32e-22,31;DOID:0050686,3.04e-09,137;DOID:225,1.33e-07,1;DOID:8552,3.01e-07,1;DOID:162,4.86e-07,235;DOID:14566,8.30e-07,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,1.52826811495903,1.14940825229924,2.2826126580967,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.520237390239513,0.328875809207352,0,0,0,0.267540828089713,0,0.679856056185397,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0.486634870302636,0.945348171640679,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.535798369704479,0.22452937262617,0.788280363383256,0,0,0.183201743930407,0,0,0,0,0.759783069987479,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0.298897361103602,0.469737994575059,0,0.140450806702248,0.204154171254893,0.61417158655884,0,0,0,0,0,0.673344455816265,0.500474079487857,0.277064115484183,0,0,0,0.453728732640084,0,0,0,0.300091096084402,0,0,0,0.506328996723799,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.330881918197182,0,0,0.404493924480493,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0.492663237895943,0.264145302039678,0.207328115540772,0,0,0.63497894292169,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.358121926479791,0.560425719967636,0,0.215627574859517,0,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.34444334449382,0.364182336013434,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0.657779629937804,0.261435451024901,0,0,0,0,0.183138929636687,0.41254749960294,0,0.650060246036521,0,0.096670718292122,0.770243085573222,0.767518373630648,0.689182862422653,0.107420244868274,0.580066775656914,0.426133137080504,0,0,0,0.127612712494584,0,0.929691098594572,0,0.6970372701606,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0,0.824686816419805,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.573645408816206,0.196498082026242,0,0.709522128141196,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,1.00988449083511,0.284567373393656,3.18852545457645,0.997896857164083,1.34053759092657,0.423347165447766,0.649243880549111,1.40398589056729,0.912938716132769,0.783399478865116,2.50634477090067,0.338583555603207,0.642352300414798,0.80719882876419,0,0.343505344755765,0.614481528616916,1.11838053946208,1.16794399198336,0,0.556812347790485,1.23087398947712,1.89318974933188,0.33307196799782,7.04935025439248,0.935702702041099,0,0.242721043499027,0.780103689942349,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,1.35393286007176,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.349839999984783,0,0,0,0.94555072707174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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=258010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25238 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000530199_5end | |||
|description=CAGE_peak_3_at_SVIP_5end | |||
|id=chr11:22850896..22850912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.79e-08,161;CL:0000837,1.79e-08,161;CL:0000988,1.87e-08,177;CL:0000037,5.66e-08,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!5.62e-20!39;DOID:8692!5.29e-18!31;DOID:2531!3.14e-17!51;DOID:0060083!3.14e-17!51;DOID:14566!2.27e-16!239;DOID:162!6.87e-16!235;DOID:0050686!4.47e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.11e-23;39!DOID:8692;3.04e-20;31!DOID:2531;2.35e-17;51!DOID:0060083;2.35e-17;51!DOID:8552;2.13e-07;1!DOID:225;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.41e-28,39;DOID:2531,7.73e-24,51;DOID:0060083,7.73e-24,51;DOID:8692,7.32e-22,31;DOID:0050686,3.04e-09,137;DOID:225,1.33e-07,1;DOID:8552,3.01e-07,1;DOID:162,4.86e-07,235;DOID:14566,8.30e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@SVIP | |||
}} |
Revision as of 17:15, 10 September 2013
Short description: | p3@SVIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SVIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000530199_5end |
EntrezGene: | SVIP |
HGNC: | 25238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.79e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-08 | 161 |
hematopoietic cell | 1.87e-08 | 177 |
hematopoietic stem cell | 5.66e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.41e-28 | 39 |
hematologic cancer | 7.73e-24 | 51 |
immune system cancer | 7.73e-24 | 51 |
myeloid leukemia | 7.32e-22 | 31 |
organ system cancer | 3.04e-09 | 137 |
syndrome | 1.33e-07 | 1 |
chronic myeloid leukemia | 3.01e-07 | 1 |
cancer | 4.86e-07 | 235 |
disease of cellular proliferation | 8.30e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.