FFCP PHASE1:Hg19::chr11:35104262..35104279,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr11:35104262..35104279,-|id=chr11:35104262..35104279,-|ontology_enrichment_celltype=CL:0000860!1.25e-85!45;CL:0002057!2.01e-84!42;CL:0000766!1.62e-57!76;CL:0002009!5.10e-57!65;CL:0000557!2.33e-56!71;CL:0002194!2.63e-56!63;CL:0000576!2.63e-56!63;CL:0000040!2.63e-56!63;CL:0000559!2.63e-56!63;CL:0000839!1.29e-54!70;CL:0000738!3.52e-49!140;CL:0002087!1.04e-47!119;CL:0002031!5.86e-45!124;CL:0000037!7.46e-40!172;CL:0000566!7.46e-40!172;CL:0000763!4.00e-38!112;CL:0000049!4.00e-38!112;CL:0000988!9.97e-37!182;CL:0002032!6.88e-36!165;CL:0000837!6.88e-36!165;CL:0000134!1.81e-17!358;CL:0002320!8.78e-17!365;CL:0000219!4.62e-15!390;CL:0002393!3.94e-12!9;CL:0002397!3.94e-12!9;CL:0000048!4.03e-12!430;CL:0000034!8.32e-12!444;CL:0000723!1.05e-11!436;CL:0000767!4.12e-08!3;CL:0000842!1.57e-07!3;CL:0000623!4.08e-07!3;CL:0000825!4.08e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.74e-107;33!CL:0002057;1.74e-107;33!CL:0000473;1.55e-75;39!CL:0000234;1.55e-75;39!CL:0000576;4.18e-66;48!CL:0000766;2.04e-39;69!CL:0000763;2.48e-18;100!CL:0002087;2.90e-17;104!CL:0000767;5.88e-16;3!CL:0002393;9.23e-14;6!CL:0002397;9.23e-14;6!CL:0000738;1.55e-10;136!CL:0000226;1.79e-07;3!CL:0000842;1.79e-07;3!CL:0000988;9.89e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-121,42;CL:0002057,2.85e-121,42;CL:0000473,2.51e-105,48;CL:0000234,2.51e-105,48;CL:0002194,5.40e-83,59;CL:0000576,5.40e-83,59;CL:0000040,5.40e-83,59;CL:0000559,5.40e-83,59;CL:0000766,4.84e-81,72;CL:0002009,4.12e-80,61;CL:0000839,1.17e-73,66;CL:0000557,1.76e-72,67;CL:0000763,4.36e-52,108;CL:0000049,4.36e-52,108;CL:0002087,2.10e-45,115;CL:0000738,2.77e-45,136;CL:0002031,6.60e-38,120;CL:0000037,2.04e-35,168;CL:0000988,2.80e-33,177;CL:0002032,7.63e-33,161;CL:0000837,7.63e-33,161;CL:0000767,6.87e-16,3;CL:0000134,3.05e-14,354;CL:0002320,7.92e-14,361;CL:0000219,2.29e-12,386;CL:0000048,1.41e-10,427;CL:0000723,2.49e-10,433;CL:0000034,5.19e-10,441;CL:0002393,3.34e-09,9;CL:0002397,3.34e-09,9;CL:0000226,1.91e-07,3;CL:0000842,1.91e-07,3|ontology_enrichment_development_v019=CL:0002057;2.51e-89;42!CL:0000049;1.56e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.80e-51!80;UBERON:0002390!3.60e-49!102;UBERON:0003061!3.60e-49!102;UBERON:0001474!1.72e-46!86;UBERON:0002193!2.79e-45!112;UBERON:0002405!5.35e-38!115;UBERON:0004765!1.24e-37!101;UBERON:0001434!1.24e-37!101;UBERON:0002204!1.19e-18!167;UBERON:0003081!2.56e-18!216;UBERON:0002384!1.35e-16!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-63,76;UBERON:0001474,3.18e-58,82;UBERON:0002390,2.45e-54,98;UBERON:0003061,2.45e-54,98;UBERON:0004765,1.54e-52,90;UBERON:0002405,1.17e-50,93;UBERON:0002193,9.55e-49,108;UBERON:0001434,1.07e-46,100;UBERON:0002204,1.80e-25,167;UBERON:0003081,6.40e-23,203;UBERON:0000926,2.06e-13,315;UBERON:0004120,2.06e-13,315;UBERON:0006603,2.06e-13,315;UBERON:0002384,2.91e-13,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,4.02521920621798,0,0.30120591877825,0,0,0,0.293600439334847,4.9859586767869,2.60707781711184,2.60413044859022,0,0,0,0.581592955118259,0.755751887377619,1.4555043671269,3.95129362739664,1.6446715520873,4.33588919253145,6.04154023876516,2.81776777182011,6.85798466676897,17.2372840368309,8.39130088658974,12.1883837934908,2.44715041405386,2.45615535052061,3.14612878223118,12.2433556948361,10.5906578935111,17.9014395223732,1.31940520074686,1.19678194572979,1.27867425159808,12.1887880224005,10.2129340444405,8.09668923694247,4.77372463987812,3.12889751052121,5.42972111762792,10.2917915447673,20.6235476153036,16.7725065343669,0.211255286311942,0.850417199860174,1.04829322754188,0.112328631146495,0.600707571366025,0.16072558669708,0.855038231223746,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0.802622484269139,1.04535523804977,0,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.174118413160805,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:35104262..35104279,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:35104262..35104279,- | |||
|id=chr11:35104262..35104279,- | |||
|ontology_enrichment_celltype=CL:0000860!1.25e-85!45;CL:0002057!2.01e-84!42;CL:0000766!1.62e-57!76;CL:0002009!5.10e-57!65;CL:0000557!2.33e-56!71;CL:0002194!2.63e-56!63;CL:0000576!2.63e-56!63;CL:0000040!2.63e-56!63;CL:0000559!2.63e-56!63;CL:0000839!1.29e-54!70;CL:0000738!3.52e-49!140;CL:0002087!1.04e-47!119;CL:0002031!5.86e-45!124;CL:0000037!7.46e-40!172;CL:0000566!7.46e-40!172;CL:0000763!4.00e-38!112;CL:0000049!4.00e-38!112;CL:0000988!9.97e-37!182;CL:0002032!6.88e-36!165;CL:0000837!6.88e-36!165;CL:0000134!1.81e-17!358;CL:0002320!8.78e-17!365;CL:0000219!4.62e-15!390;CL:0002393!3.94e-12!9;CL:0002397!3.94e-12!9;CL:0000048!4.03e-12!430;CL:0000034!8.32e-12!444;CL:0000723!1.05e-11!436;CL:0000767!4.12e-08!3;CL:0000842!1.57e-07!3;CL:0000623!4.08e-07!3;CL:0000825!4.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-107;33!CL:0002057;1.74e-107;33!CL:0000473;1.55e-75;39!CL:0000234;1.55e-75;39!CL:0000576;4.18e-66;48!CL:0000766;2.04e-39;69!CL:0000763;2.48e-18;100!CL:0002087;2.90e-17;104!CL:0000767;5.88e-16;3!CL:0002393;9.23e-14;6!CL:0002397;9.23e-14;6!CL:0000738;1.55e-10;136!CL:0000226;1.79e-07;3!CL:0000842;1.79e-07;3!CL:0000988;9.89e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-121,42;CL:0002057,2.85e-121,42;CL:0000473,2.51e-105,48;CL:0000234,2.51e-105,48;CL:0002194,5.40e-83,59;CL:0000576,5.40e-83,59;CL:0000040,5.40e-83,59;CL:0000559,5.40e-83,59;CL:0000766,4.84e-81,72;CL:0002009,4.12e-80,61;CL:0000839,1.17e-73,66;CL:0000557,1.76e-72,67;CL:0000763,4.36e-52,108;CL:0000049,4.36e-52,108;CL:0002087,2.10e-45,115;CL:0000738,2.77e-45,136;CL:0002031,6.60e-38,120;CL:0000037,2.04e-35,168;CL:0000988,2.80e-33,177;CL:0002032,7.63e-33,161;CL:0000837,7.63e-33,161;CL:0000767,6.87e-16,3;CL:0000134,3.05e-14,354;CL:0002320,7.92e-14,361;CL:0000219,2.29e-12,386;CL:0000048,1.41e-10,427;CL:0000723,2.49e-10,433;CL:0000034,5.19e-10,441;CL:0002393,3.34e-09,9;CL:0002397,3.34e-09,9;CL:0000226,1.91e-07,3;CL:0000842,1.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-89;42!CL:0000049;1.56e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.80e-51!80;UBERON:0002390!3.60e-49!102;UBERON:0003061!3.60e-49!102;UBERON:0001474!1.72e-46!86;UBERON:0002193!2.79e-45!112;UBERON:0002405!5.35e-38!115;UBERON:0004765!1.24e-37!101;UBERON:0001434!1.24e-37!101;UBERON:0002204!1.19e-18!167;UBERON:0003081!2.56e-18!216;UBERON:0002384!1.35e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-63,76;UBERON:0001474,3.18e-58,82;UBERON:0002390,2.45e-54,98;UBERON:0003061,2.45e-54,98;UBERON:0004765,1.54e-52,90;UBERON:0002405,1.17e-50,93;UBERON:0002193,9.55e-49,108;UBERON:0001434,1.07e-46,100;UBERON:0002204,1.80e-25,167;UBERON:0003081,6.40e-23,203;UBERON:0000926,2.06e-13,315;UBERON:0004120,2.06e-13,315;UBERON:0006603,2.06e-13,315;UBERON:0002384,2.91e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,4.02521920621798,0,0.30120591877825,0,0,0,0.293600439334847,4.9859586767869,2.60707781711184,2.60413044859022,0,0,0,0.581592955118259,0.755751887377619,1.4555043671269,3.95129362739664,1.6446715520873,4.33588919253145,6.04154023876516,2.81776777182011,6.85798466676897,17.2372840368309,8.39130088658974,12.1883837934908,2.44715041405386,2.45615535052061,3.14612878223118,12.2433556948361,10.5906578935111,17.9014395223732,1.31940520074686,1.19678194572979,1.27867425159808,12.1887880224005,10.2129340444405,8.09668923694247,4.77372463987812,3.12889751052121,5.42972111762792,10.2917915447673,20.6235476153036,16.7725065343669,0.211255286311942,0.850417199860174,1.04829322754188,0.112328631146495,0.600707571366025,0.16072558669708,0.855038231223746,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0.802622484269139,1.04535523804977,0,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.174118413160805,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:35104262..35104279,- | |||
}} |
Revision as of 17:35, 10 September 2013
Short description: | p@chr11:35104262..35104279, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35104262..35104279, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-63 | 76 |
bone element | 3.18e-58 | 82 |
hematopoietic system | 2.45e-54 | 98 |
blood island | 2.45e-54 | 98 |
skeletal element | 1.54e-52 | 90 |
immune system | 1.17e-50 | 93 |
hemolymphoid system | 9.55e-49 | 108 |
skeletal system | 1.07e-46 | 100 |
musculoskeletal system | 1.80e-25 | 167 |
lateral plate mesoderm | 6.40e-23 | 203 |
mesoderm | 2.06e-13 | 315 |
mesoderm-derived structure | 2.06e-13 | 315 |
presumptive mesoderm | 2.06e-13 | 315 |
connective tissue | 2.91e-13 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.