FFCP PHASE1:Hg19::chr11:72470335..72470363,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C168|description=CAGE_peak_at_chr11:72470335..72470363,+|id=chr11:72470335..72470363,+|ontology_enrichment_celltype=CL:0002057!1.12e-16!42;CL:0000860!1.50e-15!45;CL:0000766!8.10e-12!76;CL:0000839!2.16e-09!70;CL:0000557!4.31e-09!71;CL:0002194!7.52e-09!63;CL:0000576!7.52e-09!63;CL:0000040!7.52e-09!63;CL:0000559!7.52e-09!63;CL:0002009!3.00e-08!65|ontology_enrichment_celltype_v019=CL:0000860;2.39e-33;33!CL:0002057;2.39e-33;33!CL:0000473;5.74e-26;39!CL:0000234;5.74e-26;39!CL:0000576;1.47e-17;48!CL:0000766;2.11e-17;69!CL:0000771;4.66e-13;2!CL:0000097;6.52e-12;5!CL:0000763;1.63e-09;100!CL:0000094;3.16e-07;8!CL:0002087;6.42e-07;104!CL:0000163;8.38e-07;9|ontology_enrichment_celltype_v019_2=CL:0000766,9.70e-39,72;CL:0000860,1.71e-37,42;CL:0002057,1.71e-37,42;CL:0000473,2.33e-32,48;CL:0000234,2.33e-32,48;CL:0000839,1.11e-31,66;CL:0000557,3.73e-31,67;CL:0002194,3.63e-25,59;CL:0000576,3.63e-25,59;CL:0000040,3.63e-25,59;CL:0000559,3.63e-25,59;CL:0000763,2.29e-24,108;CL:0000049,2.29e-24,108;CL:0002009,3.08e-24,61;CL:0000738,2.09e-18,136;CL:0002031,1.20e-15,120;CL:0002032,7.98e-15,161;CL:0000837,7.98e-15,161;CL:0000037,5.19e-14,168;CL:0000771,4.15e-13,2;CL:0000988,4.63e-13,177;CL:0000097,6.54e-12,5;CL:0002028,6.54e-12,5;CL:0002087,2.72e-11,115;CL:0000094,3.31e-07,8;CL:0000163,8.39e-07,9|ontology_enrichment_development_v019=CL:0002057;4.94e-27;42!UBERON:0008801;4.08e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;4.08e-07;1!DOID:10165;4.08e-07;1!DOID:1798;4.08e-07;1|ontology_enrichment_disease_v019_2=DOID:1799,6.97e-07,1;DOID:10165,6.97e-07,1;DOID:1798,6.97e-07,1|ontology_enrichment_uberon=UBERON:0000062!3.35e-09!511;UBERON:0002371!2.41e-07!80|ontology_enrichment_uberon_v019=UBERON:0001831;4.08e-07;1!UBERON:0001567;4.08e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.13e-27,76;UBERON:0001474,9.34e-25,82;UBERON:0004765,3.32e-22,90;UBERON:0002405,2.32e-21,93;UBERON:0002390,4.56e-20,98;UBERON:0003061,4.56e-20,98;UBERON:0001434,1.38e-19,100;UBERON:0002193,7.76e-18,108;UBERON:0002204,4.30e-10,167;UBERON:0003081,1.39e-07,203;UBERON:0001831,5.84e-07,1;UBERON:0001567,5.84e-07,1;UBERON:0008801,5.84e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.164201178899891,0,0.393364276848904,1.15148819429164,0.619264493264304,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,2.21598163412751,1.20326668482085,0.868043482863407,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,1.62700325833979,0.822335776043652,2.16794459626573,1.1507695692886,0.256160706529101,0.47296445977717,1.37898272294647,2.5819387343353,1.35426486594342,1.50593871634084,0.272906150057846,2.47195832889593,6.12167784741805,1.28371610830437,4.47535988059329,0,0.398927315243264,0.426224750532694,2.32167390902867,0,1.24564449799115,0,0,1.73751075764093,0.605399502633369,0.368277635987565,1.89877432464531,0,0,0,0,0,0.48217676009124,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0,0,0,7.87846839054934,2.30591925467138,6.18587923789262,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0.206768026122887,0.215714200818617,0.320182673410333,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.966875596732978,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.08903203564673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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_at_chr11:72470335..72470363,+ | |||
|id=chr11:72470335..72470363,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-16!42;CL:0000860!1.50e-15!45;CL:0000766!8.10e-12!76;CL:0000839!2.16e-09!70;CL:0000557!4.31e-09!71;CL:0002194!7.52e-09!63;CL:0000576!7.52e-09!63;CL:0000040!7.52e-09!63;CL:0000559!7.52e-09!63;CL:0002009!3.00e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-33;33!CL:0002057;2.39e-33;33!CL:0000473;5.74e-26;39!CL:0000234;5.74e-26;39!CL:0000576;1.47e-17;48!CL:0000766;2.11e-17;69!CL:0000771;4.66e-13;2!CL:0000097;6.52e-12;5!CL:0000763;1.63e-09;100!CL:0000094;3.16e-07;8!CL:0002087;6.42e-07;104!CL:0000163;8.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.70e-39,72;CL:0000860,1.71e-37,42;CL:0002057,1.71e-37,42;CL:0000473,2.33e-32,48;CL:0000234,2.33e-32,48;CL:0000839,1.11e-31,66;CL:0000557,3.73e-31,67;CL:0002194,3.63e-25,59;CL:0000576,3.63e-25,59;CL:0000040,3.63e-25,59;CL:0000559,3.63e-25,59;CL:0000763,2.29e-24,108;CL:0000049,2.29e-24,108;CL:0002009,3.08e-24,61;CL:0000738,2.09e-18,136;CL:0002031,1.20e-15,120;CL:0002032,7.98e-15,161;CL:0000837,7.98e-15,161;CL:0000037,5.19e-14,168;CL:0000771,4.15e-13,2;CL:0000988,4.63e-13,177;CL:0000097,6.54e-12,5;CL:0002028,6.54e-12,5;CL:0002087,2.72e-11,115;CL:0000094,3.31e-07,8;CL:0000163,8.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.94e-27;42!UBERON:0008801;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.08e-07;1!DOID:10165;4.08e-07;1!DOID:1798;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.97e-07,1;DOID:10165,6.97e-07,1;DOID:1798,6.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000062!3.35e-09!511;UBERON:0002371!2.41e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.08e-07;1!UBERON:0001567;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.13e-27,76;UBERON:0001474,9.34e-25,82;UBERON:0004765,3.32e-22,90;UBERON:0002405,2.32e-21,93;UBERON:0002390,4.56e-20,98;UBERON:0003061,4.56e-20,98;UBERON:0001434,1.38e-19,100;UBERON:0002193,7.76e-18,108;UBERON:0002204,4.30e-10,167;UBERON:0003081,1.39e-07,203;UBERON:0001831,5.84e-07,1;UBERON:0001567,5.84e-07,1;UBERON:0008801,5.84e-07,1 | |||
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| |||
|short_description=p@chr11:72470335..72470363,+ | |||
}} |
Revision as of 19:32, 10 September 2013
Short description: | p@chr11:72470335..72470363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:72470335..72470363, + |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.70e-39 | 72 |
classical monocyte | 1.71e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-37 | 42 |
defensive cell | 2.33e-32 | 48 |
phagocyte | 2.33e-32 | 48 |
myeloid lineage restricted progenitor cell | 1.11e-31 | 66 |
granulocyte monocyte progenitor cell | 3.73e-31 | 67 |
monopoietic cell | 3.63e-25 | 59 |
monocyte | 3.63e-25 | 59 |
monoblast | 3.63e-25 | 59 |
promonocyte | 3.63e-25 | 59 |
myeloid cell | 2.29e-24 | 108 |
common myeloid progenitor | 2.29e-24 | 108 |
macrophage dendritic cell progenitor | 3.08e-24 | 61 |
leukocyte | 2.09e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.20e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.98e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.98e-15 | 161 |
hematopoietic stem cell | 5.19e-14 | 168 |
eosinophil | 4.15e-13 | 2 |
hematopoietic cell | 4.63e-13 | 177 |
mast cell | 6.54e-12 | 5 |
basophil mast progenitor cell | 6.54e-12 | 5 |
nongranular leukocyte | 2.72e-11 | 115 |
granulocyte | 3.31e-07 | 8 |
endocrine cell | 8.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.13e-27 | 76 |
bone element | 9.34e-25 | 82 |
skeletal element | 3.32e-22 | 90 |
immune system | 2.32e-21 | 93 |
hematopoietic system | 4.56e-20 | 98 |
blood island | 4.56e-20 | 98 |
skeletal system | 1.38e-19 | 100 |
hemolymphoid system | 7.76e-18 | 108 |
musculoskeletal system | 4.30e-10 | 167 |
lateral plate mesoderm | 1.39e-07 | 203 |
parotid gland | 5.84e-07 | 1 |
cheek | 5.84e-07 | 1 |
parotid gland primordium | 5.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.97e-07 | 1 |
endocrine pancreas cancer | 6.97e-07 | 1 |
pancreatic endocrine carcinoma | 6.97e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.