FFCP PHASE1:Hg19::chr11:79152060..79152082,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26011|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29945|TSSclassifier=S|UniProt=|association_with_transcript=-68bp_to_ENST00000531583_5end|coexpression_cluster_id=C1645|description=CAGE_peak_4_at_ODZ4_5end|id=chr11:79152060..79152082,-|ontology_enrichment_celltype=CL:0000055!9.85e-10!180;CL:0000221!3.26e-07!71|ontology_enrichment_celltype_v019=CL:0002319;1.08e-08;25|ontology_enrichment_celltype_v019_2=CL:0002319,2.37e-08,25;CL:0000221,7.08e-08,72;CL:0000133,1.22e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.39e-30!94;UBERON:0001016!6.39e-30!94;UBERON:0005743!7.17e-28!86;UBERON:0003075!2.04e-27!86;UBERON:0007284!2.04e-27!86;UBERON:0001049!1.11e-26!57;UBERON:0005068!1.11e-26!57;UBERON:0006241!1.11e-26!57;UBERON:0007135!1.11e-26!57;UBERON:0001017!1.84e-26!82;UBERON:0004121!5.72e-26!169;UBERON:0002346!1.33e-24!90;UBERON:0000924!3.43e-24!173;UBERON:0006601!3.43e-24!173;UBERON:0002616!2.78e-23!59;UBERON:0003056!5.12e-23!61;UBERON:0000955!2.46e-20!69;UBERON:0006238!2.46e-20!69;UBERON:0003080!6.72e-20!42;UBERON:0000475!6.91e-20!365;UBERON:0002780!7.24e-20!41;UBERON:0001890!7.24e-20!41;UBERON:0006240!7.24e-20!41;UBERON:0000033!1.60e-19!123;UBERON:0002020!3.13e-19!34;UBERON:0003528!3.13e-19!34;UBERON:0000153!7.96e-19!129;UBERON:0007811!7.96e-19!129;UBERON:0001893!1.52e-18!34;UBERON:0002791!3.91e-18!33;UBERON:0001869!6.77e-18!32;UBERON:0000956!2.61e-15!25;UBERON:0000203!2.61e-15!25;UBERON:0000119!5.08e-15!312;UBERON:0000483!2.77e-14!309;UBERON:0002619!8.49e-14!22;UBERON:0001950!1.19e-12!20;UBERON:0000468!5.92e-11!659;UBERON:0000481!1.72e-10!347;UBERON:0007023!1.37e-09!115;UBERON:0000467!2.32e-09!625;UBERON:0000480!3.33e-09!626;UBERON:0000064!9.71e-09!219;UBERON:0000025!3.69e-08!194;UBERON:0003076!6.14e-08!15;UBERON:0003057!6.14e-08!15;UBERON:0000922!7.29e-08!612|ontology_enrichment_uberon_v019=UBERON:0000956;9.92e-21;25!UBERON:0000203;9.92e-21;25!UBERON:0003528;1.71e-20;34!UBERON:0002020;1.71e-20;34!UBERON:0002791;3.00e-20;32!UBERON:0001869;6.25e-20;32!UBERON:0001893;7.39e-20;34!UBERON:0002619;2.29e-18;22!UBERON:0002780;2.16e-17;41!UBERON:0001890;2.16e-17;41!UBERON:0000073;5.35e-17;53!UBERON:0002616;5.35e-17;53!UBERON:0001950;1.03e-16;20!UBERON:0001016;1.36e-11;83!UBERON:0000955;2.10e-11;68!UBERON:0001017;6.13e-10;75!UBERON:0004733;2.49e-07;12!UBERON:0002028;2.49e-07;12!UBERON:0001871;9.66e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.59e-34,82;UBERON:0007284,3.59e-34,82;UBERON:0001049,9.63e-34,56;UBERON:0005068,9.63e-34,56;UBERON:0006241,9.63e-34,56;UBERON:0007135,9.63e-34,56;UBERON:0001016,3.34e-33,89;UBERON:0002346,1.76e-31,86;UBERON:0000073,7.09e-31,53;UBERON:0002616,7.09e-31,53;UBERON:0001017,2.00e-30,81;UBERON:0010371,2.79e-29,104;UBERON:0003056,3.10e-27,61;UBERON:0002780,8.38e-25,41;UBERON:0001890,8.38e-25,41;UBERON:0003080,8.38e-25,41;UBERON:0006240,8.38e-25,41;UBERON:0004121,8.89e-25,171;UBERON:0000924,8.89e-25,171;UBERON:0006601,8.89e-25,171;UBERON:0003528,2.32e-24,34;UBERON:0002020,2.32e-24,34;UBERON:0000955,2.80e-24,68;UBERON:0006238,2.80e-24,68;UBERON:0001893,1.99e-23,34;UBERON:0010314,2.85e-23,132;UBERON:0002791,1.25e-22,32;UBERON:0001869,1.77e-22,32;UBERON:0000956,3.26e-21,25;UBERON:0000203,3.26e-21,25;UBERON:0002619,4.75e-19,22;UBERON:0001950,2.07e-17,20;UBERON:0000119,3.09e-12,309;UBERON:0000483,1.02e-11,306;UBERON:0003076,5.66e-10,15;UBERON:0003057,5.66e-10,15;UBERON:0000025,3.13e-08,192;UBERON:0004733,2.77e-07,12;UBERON:0002028,2.77e-07,12;UBERON:0007277,2.77e-07,12;UBERON:0011216,4.75e-07,223;UBERON:0001871,5.18e-07,6|phase1_expression=0,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,2.52687949370732,0.522371256399677,0.982935746006035,1.39560233594486,1.09220686065086,1.05506791291381,0,0,2.01697543935533,1.80808358407193,0.730310090387373,0.487932798790507,4.67860020691794,5.10001728110633,3.76145665773705,1.14494394852423,3.28498620174922,6.02604670055053,0,0,0,0,0,0,0,1.50602959389125,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,2.74150969775797,2.88248216701333,3.68906099911129,0.392937226493138,3.27865759463288,1.85392221392215,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,0.397227542439656,1.72101972449288,0,1.12135520028461,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.908144565869588,1.15235184896,0.468642863667593,0,0,0.149448680551801,2.23125547423153,3.23745888736263,4.9157782345787,0,0.859840221182376,0.413303124703062,0,0,1.82032272387605,0.718618141816238,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29945 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENST00000531583_5end | |||
|coexpression_cluster_id=C1645 | |||
|description=CAGE_peak_4_at_ODZ4_5end | |||
|id=chr11:79152060..79152082,- | |||
|ontology_enrichment_celltype=CL:0000055!9.85e-10!180;CL:0000221!3.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.08e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.37e-08,25;CL:0000221,7.08e-08,72;CL:0000133,1.22e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p4@ODZ4 | |||
}} |
Revision as of 19:52, 10 September 2013
Short description: | p4@ODZ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ODZ4_5end |
Coexpression cluster: | C1645_temporal_non_occipital_parietal_duodenum_neuroblastoma_brain |
Association with transcript: | -68bp_to_ENST00000531583_5end |
EntrezGene: | ODZ4 |
HGNC: | 29945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.37e-08 | 25 |
ectodermal cell | 7.08e-08 | 72 |
neurectodermal cell | 1.22e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.