FFCP PHASE1:Hg19::chr11:89984365..89984381,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-71bp_to_EU302123_5end|coexpression_cluster_id=C415|description=CAGE_peak_1_at_EU302123_5end|id=chr11:89984365..89984381,+|ontology_enrichment_celltype=CL:0000542!4.97e-24!53;CL:0000051!4.97e-24!53;CL:0000838!1.51e-23!52;CL:0000037!8.47e-21!172;CL:0000566!8.47e-21!172;CL:0002032!4.13e-19!165;CL:0000837!4.13e-19!165;CL:0000988!1.64e-18!182;CL:0000791!6.12e-14!18;CL:0000789!6.12e-14!18;CL:0002420!6.12e-14!18;CL:0002419!6.12e-14!18;CL:0000790!6.12e-14!18;CL:0000945!5.15e-12!24;CL:0000826!5.15e-12!24;CL:0000738!8.55e-11!140;CL:0000084!1.24e-10!25;CL:0000827!1.24e-10!25;CL:0002031!7.12e-10!124;CL:0000625!2.40e-09!11;CL:0002087!2.56e-09!119;CL:0000236!1.24e-07!14|ontology_enrichment_celltype_v019=CL:0000791;1.23e-17;18!CL:0000789;1.23e-17;18!CL:0002419;1.23e-17;18!CL:0000542;6.57e-16;53!CL:0000945;1.48e-14;24!CL:0000084;1.31e-13;25!CL:0000625;2.37e-11;11!CL:0000236;2.02e-10;13!CL:0000624;2.46e-09;6|ontology_enrichment_celltype_v019_2=CL:0000838,7.19e-31,52;CL:0000542,4.46e-30,53;CL:0000051,4.46e-30,53;CL:0000037,4.04e-21,168;CL:0000988,3.48e-19,177;CL:0002032,6.58e-19,161;CL:0000837,6.58e-19,161;CL:0000791,5.76e-18,18;CL:0000789,5.76e-18,18;CL:0002420,5.76e-18,18;CL:0002419,5.76e-18,18;CL:0000790,5.76e-18,18;CL:0000945,2.06e-14,24;CL:0000826,2.06e-14,24;CL:0000084,7.44e-14,25;CL:0000827,7.44e-14,25;CL:0002087,6.98e-12,115;CL:0000236,9.06e-12,14;CL:0000625,2.12e-11,11;CL:0000738,3.72e-11,136;CL:0002031,2.95e-10,120;CL:0000624,1.13e-09,6|ontology_enrichment_development_v019=CL:0000790;1.23e-17;18!CL:0000051;6.57e-16;53|ontology_enrichment_disease=DOID:2531!6.77e-12!51;DOID:0060083!6.77e-12!51;DOID:8692!3.93e-10!31;DOID:1240!4.97e-10!39|ontology_enrichment_disease_v019=DOID:8692;9.43e-10;31!DOID:2531;4.60e-08;51!DOID:0060083;4.60e-08;51!DOID:1240;2.30e-07;39|ontology_enrichment_disease_v019_2=DOID:2531,1.37e-10,51;DOID:0060083,1.37e-10,51;DOID:8692,4.41e-10,31;DOID:1240,1.46e-09,39|ontology_enrichment_uberon=UBERON:0007023!1.05e-08!115|ontology_enrichment_uberon_v019=UBERON:0002346;1.39e-08;4!UBERON:0000923;1.39e-08;4!UBERON:0010316;1.39e-08;4!UBERON:0005291;1.39e-08;4!UBERON:0000178;3.71e-08;15!UBERON:0000179;3.71e-08;15!UBERON:0000463;3.71e-08;15!UBERON:0002193;1.63e-07;42!UBERON:0002390;1.86e-07;32!UBERON:0002050;8.26e-07;5!UBERON:0005423;8.26e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.55e-08,15;UBERON:0000179,4.55e-08,15;UBERON:0000463,4.55e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.36612416744778,4.171671409625,0,1.91914699048606,0.154816123316076,0,0,0,0.774672005803016,0,5.87200878669694,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,2.18455444504853,0,2.13365111283254,0,1.14950487990897,1.32208974556972,0.954053754535364,1.70763890732835,2.34894875748376,1.14681968437569,5.28685314316103,5.60508562981536,2.89722493252585,4.32761494250433,1.96505381374582,2.46721798799411,0.334372990781356,1.95553359980154,1.4203434172042,5.84480185223734,0.111410456885174,1.47302953737419,1.77227115666897,1.62482318259009,0.896639238079726,0.780356085359269,0.493313713811028,0.276350017785848,0.579606171470105,3.70716407905151,4.54819407752512,0,0.339928028092699,2.68254345521345,3.4362744548263,1.77113784413652,2.54852331459277,2.60433381542567,0.950452044448374,2.71035214339991,4.09557155694139,2.49861453104692,2.13099526839615,1.64225599384209,4.63695509416885,0.802320587350522,3.18613688542158,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.982343066232845,0,0,0.324547393654683,0,0.26591592103773,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,3.6178346283706,6.40379272836078,5.69025041699939,0,0,0,0,0,3.57198913136319,1.79623498100936,1.0135033243499,0,0,0.366403487860815,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,1.97065295158377,1.05658120815871,0.621984346622316,0.720599767084807,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,2.56139988262505,3.01878604803324,2.31017465303547,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.4121640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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-71bp_to_EU302123_5end | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_1_at_EU302123_5end | |||
|id=chr11:89984365..89984381,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.97e-24!53;CL:0000051!4.97e-24!53;CL:0000838!1.51e-23!52;CL:0000037!8.47e-21!172;CL:0000566!8.47e-21!172;CL:0002032!4.13e-19!165;CL:0000837!4.13e-19!165;CL:0000988!1.64e-18!182;CL:0000791!6.12e-14!18;CL:0000789!6.12e-14!18;CL:0002420!6.12e-14!18;CL:0002419!6.12e-14!18;CL:0000790!6.12e-14!18;CL:0000945!5.15e-12!24;CL:0000826!5.15e-12!24;CL:0000738!8.55e-11!140;CL:0000084!1.24e-10!25;CL:0000827!1.24e-10!25;CL:0002031!7.12e-10!124;CL:0000625!2.40e-09!11;CL:0002087!2.56e-09!119;CL:0000236!1.24e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.23e-17;18!CL:0000789;1.23e-17;18!CL:0002419;1.23e-17;18!CL:0000542;6.57e-16;53!CL:0000945;1.48e-14;24!CL:0000084;1.31e-13;25!CL:0000625;2.37e-11;11!CL:0000236;2.02e-10;13!CL:0000624;2.46e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.19e-31,52;CL:0000542,4.46e-30,53;CL:0000051,4.46e-30,53;CL:0000037,4.04e-21,168;CL:0000988,3.48e-19,177;CL:0002032,6.58e-19,161;CL:0000837,6.58e-19,161;CL:0000791,5.76e-18,18;CL:0000789,5.76e-18,18;CL:0002420,5.76e-18,18;CL:0002419,5.76e-18,18;CL:0000790,5.76e-18,18;CL:0000945,2.06e-14,24;CL:0000826,2.06e-14,24;CL:0000084,7.44e-14,25;CL:0000827,7.44e-14,25;CL:0002087,6.98e-12,115;CL:0000236,9.06e-12,14;CL:0000625,2.12e-11,11;CL:0000738,3.72e-11,136;CL:0002031,2.95e-10,120;CL:0000624,1.13e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.23e-17;18!CL:0000051;6.57e-16;53 | |||
|ontology_enrichment_disease=DOID:2531!6.77e-12!51;DOID:0060083!6.77e-12!51;DOID:8692!3.93e-10!31;DOID:1240!4.97e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.43e-10;31!DOID:2531;4.60e-08;51!DOID:0060083;4.60e-08;51!DOID:1240;2.30e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.37e-10,51;DOID:0060083,1.37e-10,51;DOID:8692,4.41e-10,31;DOID:1240,1.46e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.39e-08;4!UBERON:0000923;1.39e-08;4!UBERON:0010316;1.39e-08;4!UBERON:0005291;1.39e-08;4!UBERON:0000178;3.71e-08;15!UBERON:0000179;3.71e-08;15!UBERON:0000463;3.71e-08;15!UBERON:0002193;1.63e-07;42!UBERON:0002390;1.86e-07;32!UBERON:0002050;8.26e-07;5!UBERON:0005423;8.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.55e-08,15;UBERON:0000179,4.55e-08,15;UBERON:0000463,4.55e-08,15 | |||
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| |||
|short_description=p1@EU302123 | |||
}} |
Revision as of 20:08, 10 September 2013
Short description: | p1@EU302123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EU302123_5end |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | -71bp_to_EU302123_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.19e-31 | 52 |
lymphocyte | 4.46e-30 | 53 |
common lymphoid progenitor | 4.46e-30 | 53 |
hematopoietic stem cell | 4.04e-21 | 168 |
hematopoietic cell | 3.48e-19 | 177 |
hematopoietic oligopotent progenitor cell | 6.58e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.58e-19 | 161 |
mature alpha-beta T cell | 5.76e-18 | 18 |
alpha-beta T cell | 5.76e-18 | 18 |
immature T cell | 5.76e-18 | 18 |
mature T cell | 5.76e-18 | 18 |
immature alpha-beta T cell | 5.76e-18 | 18 |
lymphocyte of B lineage | 2.06e-14 | 24 |
pro-B cell | 2.06e-14 | 24 |
T cell | 7.44e-14 | 25 |
pro-T cell | 7.44e-14 | 25 |
nongranular leukocyte | 6.98e-12 | 115 |
B cell | 9.06e-12 | 14 |
CD8-positive, alpha-beta T cell | 2.12e-11 | 11 |
leukocyte | 3.72e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.95e-10 | 120 |
CD4-positive, alpha-beta T cell | 1.13e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 4.55e-08 | 15 |
haemolymphatic fluid | 4.55e-08 | 15 |
organism substance | 4.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.37e-10 | 51 |
immune system cancer | 1.37e-10 | 51 |
myeloid leukemia | 4.41e-10 | 31 |
leukemia | 1.46e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.