FFCP PHASE1:Hg19::chr11:94800972..94801064,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16988 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-36bp_to_uc001pfg.1_5end | |||
|description=CAGE_peak_3_at_SRSF8_5end | |||
|id=chr11:94800972..94801064,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.51e-16!52;CL:0000542!8.08e-16!53;CL:0000051!8.08e-16!53;CL:0000791!3.06e-10!18;CL:0000789!3.06e-10!18;CL:0002420!3.06e-10!18;CL:0002419!3.06e-10!18;CL:0000790!3.06e-10!18;CL:0000084!2.02e-09!25;CL:0000827!2.02e-09!25;CL:0000236!1.21e-07!14;CL:0000945!5.33e-07!24;CL:0000826!5.33e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.52e-11;18!CL:0000789;1.52e-11;18!CL:0002419;1.52e-11;18!CL:0000542;6.59e-11;53!CL:0000084;1.04e-10;25!CL:0000236;2.00e-08;13!CL:0000625;1.98e-07;11!CL:0000945;7.78e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-17,52;CL:0000542,2.77e-17,53;CL:0000051,2.77e-17,53;CL:0000791,1.14e-11,18;CL:0000789,1.14e-11,18;CL:0002420,1.14e-11,18;CL:0002419,1.14e-11,18;CL:0000790,1.14e-11,18;CL:0000084,9.38e-11,25;CL:0000827,9.38e-11,25;CL:0000236,1.19e-08,14;CL:0000625,1.42e-07,11;CL:0000945,4.46e-07,24;CL:0000826,4.46e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-11;18!CL:0000051;6.59e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;3.11e-16;34!UBERON:0001869;4.45e-16;32!UBERON:0003528;6.35e-16;34!UBERON:0002020;6.35e-16;34!UBERON:0002791;6.90e-16;32!UBERON:0002780;2.32e-15;41!UBERON:0001890;2.32e-15;41!UBERON:0000956;9.87e-14;25!UBERON:0000203;9.87e-14;25!UBERON:0002619;1.26e-13;22!UBERON:0000073;3.49e-13;53!UBERON:0002616;3.49e-13;53!UBERON:0001950;1.12e-12;20!UBERON:0001017;1.66e-08;75!UBERON:0000178;3.94e-08;15!UBERON:0000179;3.94e-08;15!UBERON:0000463;3.94e-08;15!UBERON:0001016;3.96e-08;83!UBERON:0000955;4.58e-08;68!UBERON:0007023;3.79e-07;114 | |||
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| |||
|short_description=p3@SRSF8 | |||
}} |
Revision as of 20:15, 10 September 2013
Short description: | p3@SRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SRSF8_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_uc001pfg.1_5end |
EntrezGene: | SRSF8 |
HGNC: | 16988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.59e-17 | 52 |
lymphocyte | 2.77e-17 | 53 |
common lymphoid progenitor | 2.77e-17 | 53 |
mature alpha-beta T cell | 1.14e-11 | 18 |
alpha-beta T cell | 1.14e-11 | 18 |
immature T cell | 1.14e-11 | 18 |
mature T cell | 1.14e-11 | 18 |
immature alpha-beta T cell | 1.14e-11 | 18 |
T cell | 9.38e-11 | 25 |
pro-T cell | 9.38e-11 | 25 |
B cell | 1.19e-08 | 14 |
CD8-positive, alpha-beta T cell | 1.42e-07 | 11 |
lymphocyte of B lineage | 4.46e-07 | 24 |
pro-B cell | 4.46e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.