FFCP PHASE1:Hg19::chr12:112451328..112451343,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10961|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13799|TSSclassifier=S|UniProt=F8W1G0|association_with_transcript=44bp_to_ENST00000552052_5end|description=CAGE_peak_4_at_ERP29_5end|id=chr12:112451328..112451343,+|ontology_enrichment_celltype=CL:0000763!3.25e-22!112;CL:0000049!3.25e-22!112;CL:0000037!4.72e-20!172;CL:0000566!4.72e-20!172;CL:0002032!1.93e-19!165;CL:0000837!1.93e-19!165;CL:0002057!2.04e-18!42;CL:0000988!2.22e-18!182;CL:0000557!3.04e-18!71;CL:0000860!5.34e-18!45;CL:0000839!2.18e-17!70;CL:0002009!9.17e-17!65;CL:0000766!1.72e-15!76;CL:0002194!2.04e-15!63;CL:0000576!2.04e-15!63;CL:0000040!2.04e-15!63;CL:0000559!2.04e-15!63;CL:0002031!2.97e-15!124;CL:0000738!9.17e-14!140;CL:0002087!2.70e-12!119|ontology_enrichment_celltype_v019=CL:0000860;4.81e-15;33!CL:0002057;4.81e-15;33!CL:0000473;1.85e-13;39!CL:0000234;1.85e-13;39!CL:0001014;9.06e-13;2!CL:0001016;9.06e-13;2!CL:0000576;1.03e-09;48!CL:0000766;3.15e-08;69!CL:0000767;3.78e-08;3!CL:0000037;3.21e-07;1!CL:0001024;3.21e-07;1|ontology_enrichment_celltype_v019_2=CL:0000037,7.28e-18,168;CL:0000763,2.45e-17,108;CL:0000049,2.45e-17,108;CL:0000988,1.13e-16,177;CL:0002009,1.76e-16,61;CL:0002032,1.13e-15,161;CL:0000837,1.13e-15,161;CL:0000557,9.56e-15,67;CL:0000738,1.89e-14,136;CL:0000473,1.07e-13,48;CL:0000234,1.07e-13,48;CL:0000766,2.05e-13,72;CL:0000860,2.28e-13,42;CL:0002057,2.28e-13,42;CL:0001014,9.14e-13,2;CL:0001016,9.14e-13,2;CL:0002194,1.87e-12,59;CL:0000576,1.87e-12,59;CL:0000040,1.87e-12,59;CL:0000559,1.87e-12,59;CL:0002031,4.15e-12,120;CL:0000839,6.96e-11,66;CL:0002087,8.36e-10,115;CL:0000767,2.12e-08,3;CL:0001024,3.13e-07,1;CL:0000511,5.26e-07,1;CL:0002625,5.26e-07,1;CL:0000216,5.26e-07,1;CL:0000819,9.79e-07,1|ontology_enrichment_development_v019=CL:0002057;5.08e-10;42|ontology_enrichment_disease=DOID:8692!1.26e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0060073,9.79e-07,1;DOID:8675,9.79e-07,1|ontology_enrichment_uberon=UBERON:0002371!2.55e-15!80;UBERON:0001474!1.79e-14!86;UBERON:0002390!2.02e-13!102;UBERON:0003061!2.02e-13!102;UBERON:0002193!1.65e-12!112;UBERON:0004765!2.62e-12!101;UBERON:0001434!2.62e-12!101;UBERON:0002405!8.72e-11!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-14,76;UBERON:0001474,2.36e-13,82;UBERON:0004765,6.99e-12,90;UBERON:0002405,2.14e-11,93;UBERON:0002390,1.19e-10,98;UBERON:0003061,1.19e-10,98;UBERON:0001434,2.25e-10,100;UBERON:0002193,2.28e-09,108;UBERON:0001136,5.26e-07,1;UBERON:0001343,5.26e-07,1;UBERON:0004910,5.26e-07,1;UBERON:0005154,5.26e-07,1;UBERON:0005295,5.26e-07,1;UBERON:0004813,5.26e-07,1;UBERON:0005297,5.26e-07,1;UBERON:0005294,5.26e-07,1;UBERON:0010141,5.26e-07,1;UBERON:0005891,5.26e-07,1|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,1.57345710739562,0,1.39334510984468,0,0,0.369754010166788,3.40855682553327,0.284338464974843,3.81680571135301,0.553995408531877,0.401088894940283,0.651032612147555,0.223915474239924,0,0,1.01778767145695,0,0.970336244751265,0.464858073811369,1.23350366406548,0.619412741790207,0.28769239232215,0.768482119587302,0.236482229888585,0.344745680736619,1.29096936716765,0,2.07066573496865,0,0.674170453335254,0,0.320929027076094,1.27867425159808,0.659702600373432,0.797854630486527,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,1.50749199154046,1.5644487552606,0.868755378820466,0.605399502633369,1.10483290796269,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,1.35159203557356,0.32145117339416,0.285012743741249,0.79566670879636,0.182664153764634,1.75996244461323,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,0,0,0,1.68152568894461,2.10707267820062,0.393419540227666,0,0.411202997999018,0,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0,0.260118695119756,0,0,0,0.593146252648242,0.802622484269139,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0,0.175669571386252,0.196468613246569,0,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0.243947412259191,0.1325297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4226557275834,0,0.187967835959707,0.0644578879735772,0.299823467774787,0,0,0.401206833445841,0,0,0,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.378499274505237,0.327796715891087,0.253397002022874,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0.366724332548599,0,0,0.201273793591026,0.320568492303233|short_description=p4@ERP29}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13799 | |||
|TSSclassifier=S | |||
|UniProt=F8W1G0 | |||
|association_with_transcript=44bp_to_ENST00000552052_5end | |||
|description=CAGE_peak_4_at_ERP29_5end | |||
|id=chr12:112451328..112451343,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.25e-22!112;CL:0000049!3.25e-22!112;CL:0000037!4.72e-20!172;CL:0000566!4.72e-20!172;CL:0002032!1.93e-19!165;CL:0000837!1.93e-19!165;CL:0002057!2.04e-18!42;CL:0000988!2.22e-18!182;CL:0000557!3.04e-18!71;CL:0000860!5.34e-18!45;CL:0000839!2.18e-17!70;CL:0002009!9.17e-17!65;CL:0000766!1.72e-15!76;CL:0002194!2.04e-15!63;CL:0000576!2.04e-15!63;CL:0000040!2.04e-15!63;CL:0000559!2.04e-15!63;CL:0002031!2.97e-15!124;CL:0000738!9.17e-14!140;CL:0002087!2.70e-12!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.81e-15;33!CL:0002057;4.81e-15;33!CL:0000473;1.85e-13;39!CL:0000234;1.85e-13;39!CL:0001014;9.06e-13;2!CL:0001016;9.06e-13;2!CL:0000576;1.03e-09;48!CL:0000766;3.15e-08;69!CL:0000767;3.78e-08;3!CL:0000037;3.21e-07;1!CL:0001024;3.21e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.28e-18,168;CL:0000763,2.45e-17,108;CL:0000049,2.45e-17,108;CL:0000988,1.13e-16,177;CL:0002009,1.76e-16,61;CL:0002032,1.13e-15,161;CL:0000837,1.13e-15,161;CL:0000557,9.56e-15,67;CL:0000738,1.89e-14,136;CL:0000473,1.07e-13,48;CL:0000234,1.07e-13,48;CL:0000766,2.05e-13,72;CL:0000860,2.28e-13,42;CL:0002057,2.28e-13,42;CL:0001014,9.14e-13,2;CL:0001016,9.14e-13,2;CL:0002194,1.87e-12,59;CL:0000576,1.87e-12,59;CL:0000040,1.87e-12,59;CL:0000559,1.87e-12,59;CL:0002031,4.15e-12,120;CL:0000839,6.96e-11,66;CL:0002087,8.36e-10,115;CL:0000767,2.12e-08,3;CL:0001024,3.13e-07,1;CL:0000511,5.26e-07,1;CL:0002625,5.26e-07,1;CL:0000216,5.26e-07,1;CL:0000819,9.79e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.08e-10;42 | |||
|ontology_enrichment_disease=DOID:8692!1.26e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.79e-07,1;DOID:8675,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-15!80;UBERON:0001474!1.79e-14!86;UBERON:0002390!2.02e-13!102;UBERON:0003061!2.02e-13!102;UBERON:0002193!1.65e-12!112;UBERON:0004765!2.62e-12!101;UBERON:0001434!2.62e-12!101;UBERON:0002405!8.72e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-14,76;UBERON:0001474,2.36e-13,82;UBERON:0004765,6.99e-12,90;UBERON:0002405,2.14e-11,93;UBERON:0002390,1.19e-10,98;UBERON:0003061,1.19e-10,98;UBERON:0001434,2.25e-10,100;UBERON:0002193,2.28e-09,108;UBERON:0001136,5.26e-07,1;UBERON:0001343,5.26e-07,1;UBERON:0004910,5.26e-07,1;UBERON:0005154,5.26e-07,1;UBERON:0005295,5.26e-07,1;UBERON:0004813,5.26e-07,1;UBERON:0005297,5.26e-07,1;UBERON:0005294,5.26e-07,1;UBERON:0010141,5.26e-07,1;UBERON:0005891,5.26e-07,1 | |||
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| |||
|short_description=p4@ERP29 | |||
}} |
Revision as of 20:55, 10 September 2013
Short description: | p4@ERP29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ERP29_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000552052_5end |
EntrezGene: | ERP29 |
HGNC: | 13799 |
UniProt: | F8W1G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-14 | 76 |
bone element | 2.36e-13 | 82 |
skeletal element | 6.99e-12 | 90 |
immune system | 2.14e-11 | 93 |
hematopoietic system | 1.19e-10 | 98 |
blood island | 1.19e-10 | 98 |
skeletal system | 2.25e-10 | 100 |
hemolymphoid system | 2.28e-09 | 108 |
mesothelium | 5.26e-07 | 1 |
seminiferous tubule of testis | 5.26e-07 | 1 |
epithelium of male gonad | 5.26e-07 | 1 |
epithelial cord | 5.26e-07 | 1 |
sex cord | 5.26e-07 | 1 |
seminiferous tubule epithelium | 5.26e-07 | 1 |
testis sex cord | 5.26e-07 | 1 |
genital ridge | 5.26e-07 | 1 |
primitive sex cord of indifferent gonad | 5.26e-07 | 1 |
coelomic epithelium | 5.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.79e-07 | 1 |
lymphosarcoma | 9.79e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.