FFCP PHASE1:Hg19::chr12:12870055..12870119,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1027|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1785|TSSclassifier=S|UniProt=P46527|association_with_transcript=0bp_to_ENST00000228872_5end|description=CAGE_peak_4_at_CDKN1B_5end|id=chr12:12870055..12870119,+|ontology_enrichment_celltype=CL:0000988!2.59e-14!182;CL:0002032!6.25e-14!165;CL:0000837!6.25e-14!165;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0000542!1.52e-12!53;CL:0000051!1.52e-12!53;CL:0000838!4.78e-12!52;CL:0000945!5.66e-10!24;CL:0000826!5.66e-10!24;CL:0000738!1.40e-09!140;CL:0002031!2.14e-09!124;CL:0002087!1.17e-08!119;CL:0000236!1.88e-07!14|ontology_enrichment_celltype_v019=CL:0000945;2.06e-13;24!CL:0000236;4.57e-09;13!CL:0000542;1.65e-08;53|ontology_enrichment_celltype_v019_2=CL:0000542,1.00e-13,53;CL:0000051,1.00e-13,53;CL:0000945,1.60e-13,24;CL:0000826,1.60e-13,24;CL:0000838,5.07e-13,52;CL:0002032,5.95e-11,161;CL:0000837,5.95e-11,161;CL:0000037,6.58e-11,168;CL:0000988,9.59e-11,177;CL:0000236,3.14e-10,14;CL:0002031,3.52e-07,120;CL:0002087,3.66e-07,115;CL:0000738,8.36e-07,136|ontology_enrichment_development_v019=CL:0000051;1.65e-08;53|ontology_enrichment_disease=DOID:162!1.48e-15!235;DOID:14566!1.49e-14!239;DOID:305!2.19e-13!106;DOID:0050687!2.70e-11!143;DOID:0050686!1.19e-07!137;DOID:2531!3.29e-07!51;DOID:0060083!3.29e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,9.24e-11,235;DOID:305,1.46e-10,106;DOID:14566,5.10e-10,239;DOID:0050687,5.10e-08,143;DOID:0050686,6.00e-07,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.984968464614303,1.63200552995402,0.313454721478088,0.286235987131057,0.958120975510189,2.00868223351684,2.06316195519468,1.23150884174919,1.8890587515283,1.57345710739562,0.767658796194425,0.928896739896456,0,0.90361775633475,0.369754010166788,0.387336002901508,0.426507697462265,1.17440175733939,1.66198622559563,0.401088894940283,0.868043482863407,1.11957737119962,0.647787332037959,0.515151135268373,1.16318591023652,0.755751887377619,0.970336244751265,0,1.23350366406548,0,1.43846196161075,1.0246428261164,0.945928919554341,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,0.306083892370903,0,0,0.659702600373432,0.199463657621632,2.13112375266347,0.580418477257168,0.56738522469114,0,2.00998932205395,1.5644487552606,1.52032191293582,0,0,0.632924774881769,1.26753171787165,0.850417199860174,0.209658645508376,1.12328631146495,0.300353785683013,0.48217676009124,1.99508920618874,1.39241674039363,1.27864907635244,5.27988733383968,1.09227722252426,2.66852776159066,3.84057200309856,1.60158394814405,0.574752439954483,1.32208974556972,1.90810750907073,4.55370375287559,2.34894875748376,3.82273228125229,0,0.560508562981536,1.05353633910031,0.590129310341499,1.96505381374582,3.08402248499264,0,0.651844533267181,1.89379122293893,0,4.79064964606246,6.18672405697158,3.98761010250518,5.41607727530031,4.48319619039863,2.86130564631732,1.80881695064044,2.21080014228679,1.44901542867526,1.03800594213442,0.267540828089713,0,2.94604291013672,2.68254345521345,3.09264700934367,2.53019692019503,0,0,0.950452044448374,0.150575119077773,0.383959833463255,2.49861453104692,0.236777252044017,2.46338399076314,0.80642697289893,1.60464117470104,0.434473211648397,2.43806866313962,0,0.383587685530591,0,0,0.434539556882471,0,0,1.03988298880475,0.443458794925128,0.527008714158756,0.392937226493138,0,0.370784442784429,0.324547393654683,0.348259474598534,0,0,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0.838998872419812,0.825354125820202,0,0.258416759169329,0,0,0.402829317109147,0,1.22031028774085,0,0,0.892997282840798,0,0.225222960966644,0,0.949265659568129,0.916008719652036,2.63560834872127,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,1.12135520028461,0,1.2333377420858,0.311211035399766,0.808264032418128,0.490385709340376,0.151357427644931,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0.491337269247072,0.103325781175765,0,1.23633464639278,0,0,0.673344455816265,0.750711119231785,0.277064115484183,0.438977620880838,1.22595118319608,1.20190447125277,0.340296549480063,0.538168907066586,0,0,1.20036438433761,0.309157587715317,0,0.558350568994769,0.337552664482532,0.194874010322397,1.26216887122057,0.184099797284599,0.161646056818812,0.355009592516614,0.403008392910561,0.508681776931463,0,0.272746120590835,0.286804595389004,0.243947412259191,0.530119073285941,0.464775771478074,0.621966330092223,0.756962552626885,0.36497735907583,0,0.643240938192885,2.76269842704961,0.464367928031979,0,1.18306800039844,1.51726221070292,1.92808823906786,0.992645754591546,0.435758888184812,0.949082476444386,0.674156540800822,0.196221465125346,0.38474715694639,1.4763109092493,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1027 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1785 | |||
|TSSclassifier=S | |||
|UniProt=P46527 | |||
|association_with_transcript=0bp_to_ENST00000228872_5end | |||
|description=CAGE_peak_4_at_CDKN1B_5end | |||
|id=chr12:12870055..12870119,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.59e-14!182;CL:0002032!6.25e-14!165;CL:0000837!6.25e-14!165;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0000542!1.52e-12!53;CL:0000051!1.52e-12!53;CL:0000838!4.78e-12!52;CL:0000945!5.66e-10!24;CL:0000826!5.66e-10!24;CL:0000738!1.40e-09!140;CL:0002031!2.14e-09!124;CL:0002087!1.17e-08!119;CL:0000236!1.88e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.06e-13;24!CL:0000236;4.57e-09;13!CL:0000542;1.65e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.00e-13,53;CL:0000051,1.00e-13,53;CL:0000945,1.60e-13,24;CL:0000826,1.60e-13,24;CL:0000838,5.07e-13,52;CL:0002032,5.95e-11,161;CL:0000837,5.95e-11,161;CL:0000037,6.58e-11,168;CL:0000988,9.59e-11,177;CL:0000236,3.14e-10,14;CL:0002031,3.52e-07,120;CL:0002087,3.66e-07,115;CL:0000738,8.36e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-08;53 | |||
|ontology_enrichment_disease=DOID:162!1.48e-15!235;DOID:14566!1.49e-14!239;DOID:305!2.19e-13!106;DOID:0050687!2.70e-11!143;DOID:0050686!1.19e-07!137;DOID:2531!3.29e-07!51;DOID:0060083!3.29e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.24e-11,235;DOID:305,1.46e-10,106;DOID:14566,5.10e-10,239;DOID:0050687,5.10e-08,143;DOID:0050686,6.00e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@CDKN1B | |||
}} |
Revision as of 21:42, 10 September 2013
Short description: | p4@CDKN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CDKN1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000228872_5end |
EntrezGene: | CDKN1B |
HGNC: | 1785 |
UniProt: | P46527 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.00e-13 | 53 |
common lymphoid progenitor | 1.00e-13 | 53 |
lymphocyte of B lineage | 1.60e-13 | 24 |
pro-B cell | 1.60e-13 | 24 |
lymphoid lineage restricted progenitor cell | 5.07e-13 | 52 |
hematopoietic oligopotent progenitor cell | 5.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.95e-11 | 161 |
hematopoietic stem cell | 6.58e-11 | 168 |
hematopoietic cell | 9.59e-11 | 177 |
B cell | 3.14e-10 | 14 |
hematopoietic lineage restricted progenitor cell | 3.52e-07 | 120 |
nongranular leukocyte | 3.66e-07 | 115 |
leukocyte | 8.36e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.24e-11 | 235 |
carcinoma | 1.46e-10 | 106 |
disease of cellular proliferation | 5.10e-10 | 239 |
cell type cancer | 5.10e-08 | 143 |
organ system cancer | 6.00e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.