FFCP PHASE1:Hg19::chr12:27398584..27398595,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23012|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17848|TSSclassifier=S|UniProt=F5GY51|association_with_transcript=0bp_to_ENST00000543246_5end|coexpression_cluster_id=C42|description=CAGE_peak_8_at_STK38L_5end|id=chr12:27398584..27398595,+|ontology_enrichment_celltype=CL:0005020!3.95e-08!6;CL:0002138!3.95e-08!6;CL:0005022!3.95e-08!6|ontology_enrichment_celltype_v019=CL:0002253;3.81e-21;2!CL:0000307;1.83e-14;3!CL:0002563;2.80e-11;4!CL:0002543;6.78e-08;6|ontology_enrichment_celltype_v019_2=CL:0002253,3.81e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002563,2.80e-11,4;CL:0002543,6.34e-08,6|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001052;2.80e-11;4!UBERON:0001242;2.80e-11;4!UBERON:0001262;2.80e-11;4!UBERON:0004786;2.80e-11;4!UBERON:0004808;2.80e-11;4!UBERON:0001277;2.80e-11;4!UBERON:0004907;2.74e-09;5!UBERON:0000485;5.38e-07;7!UBERON:0003929;5.38e-07;7!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.80e-11,4;UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4;UBERON:0004907,2.74e-09,5;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.708397031823113,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,5.30846585583112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.641136984606466|short_description=p8@STK38L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17848 | |||
|TSSclassifier=S | |||
|UniProt=F5GY51 | |||
|association_with_transcript=0bp_to_ENST00000543246_5end | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_8_at_STK38L_5end | |||
|id=chr12:27398584..27398595,+ | |||
|ontology_enrichment_celltype=CL:0005020!3.95e-08!6;CL:0002138!3.95e-08!6;CL:0005022!3.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002253;3.81e-21;2!CL:0000307;1.83e-14;3!CL:0002563;2.80e-11;4!CL:0002543;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.81e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002563,2.80e-11,4;CL:0002543,6.34e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.80e-11;4!UBERON:0001242;2.80e-11;4!UBERON:0001262;2.80e-11;4!UBERON:0004786;2.80e-11;4!UBERON:0004808;2.80e-11;4!UBERON:0001277;2.80e-11;4!UBERON:0004907;2.74e-09;5!UBERON:0000485;5.38e-07;7!UBERON:0003929;5.38e-07;7!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.80e-11,4;UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4;UBERON:0004907,2.74e-09,5;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.708397031823113,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,5.30846585583112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p8@STK38L | |||
}} |
Revision as of 22:19, 10 September 2013
Short description: | p8@STK38L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_STK38L_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000543246_5end |
EntrezGene: | STK38L |
HGNC: | 17848 |
UniProt: | F5GY51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.81e-21 | 2 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
intestinal epithelial cell | 2.80e-11 | 4 |
vein endothelial cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
rectum | 2.80e-11 | 4 |
intestinal mucosa | 2.80e-11 | 4 |
wall of intestine | 2.80e-11 | 4 |
gastrointestinal system mucosa | 2.80e-11 | 4 |
gastrointestinal system epithelium | 2.80e-11 | 4 |
intestinal epithelium | 2.80e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.