FFCP PHASE1:Hg19::chr12:55378459..55378469,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9840|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29109|TSSclassifier=S|UniProt=A2RU30|association_with_transcript=-3bp_to_ENST00000449076,NM_001136030,uc001sgo.3,uc010spd.1_5end|coexpression_cluster_id=C1020|description=CAGE_peak_4_at_KIAA0748_5end|id=chr12:55378459..55378469,-|ontology_enrichment_celltype=CL:0000988!2.16e-40!182;CL:0000037!4.99e-40!172;CL:0000566!4.99e-40!172;CL:0002032!1.04e-35!165;CL:0000837!1.04e-35!165;CL:0000738!7.40e-32!140;CL:0000542!1.43e-31!53;CL:0000051!1.43e-31!53;CL:0000838!1.29e-30!52;CL:0000084!1.35e-28!25;CL:0000827!1.35e-28!25;CL:0002031!2.11e-27!124;CL:0000791!1.13e-25!18;CL:0000789!1.13e-25!18;CL:0002420!1.13e-25!18;CL:0002419!1.13e-25!18;CL:0000790!1.13e-25!18;CL:0002087!2.79e-25!119;CL:0000625!6.84e-16!11;CL:0000624!1.26e-10!6;CL:0000763!1.93e-10!112;CL:0000049!1.93e-10!112;CL:0000080!9.11e-10!6;CL:0002274!5.12e-09!5;CL:0000457!5.12e-09!5;CL:0002191!5.12e-09!5;CL:0000097!5.12e-09!5;CL:0000831!5.12e-09!5;CL:0002028!5.12e-09!5;CL:0000134!1.00e-07!358;CL:0002320!3.20e-07!365|ontology_enrichment_celltype_v019=CL:0000084;2.80e-22;25!CL:0000791;2.14e-21;18!CL:0000789;2.14e-21;18!CL:0002419;2.14e-21;18!CL:0000624;1.65e-15;6!CL:0000097;7.44e-13;5!CL:0000625;1.81e-10;11!CL:0000542;7.49e-10;53!CL:0000226;2.04e-08;3!CL:0000842;2.04e-08;3!CL:0000898;3.77e-08;3!CL:0000623;1.20e-07;3!CL:0000163;5.97e-07;9|ontology_enrichment_celltype_v019_2=CL:0000988,6.21e-23,177;CL:0000084,2.77e-22,25;CL:0000827,2.77e-22,25;CL:0000791,1.76e-21,18;CL:0000789,1.76e-21,18;CL:0002420,1.76e-21,18;CL:0002419,1.76e-21,18;CL:0000790,1.76e-21,18;CL:0000037,2.96e-21,168;CL:0000838,4.53e-19,52;CL:0000542,1.36e-18,53;CL:0000051,1.36e-18,53;CL:0002032,8.36e-18,161;CL:0000837,8.36e-18,161;CL:0000624,1.17e-15,6;CL:0000738,8.07e-14,136;CL:0000097,3.71e-13,5;CL:0002028,3.71e-13,5;CL:0002031,3.04e-11,120;CL:0000625,1.89e-10,11;CL:0002087,4.93e-10,115;CL:0000226,1.81e-08,3;CL:0000842,1.81e-08,3;CL:0000898,2.99e-08,3;CL:0000623,1.29e-07,3;CL:0000825,1.29e-07,3;CL:0000163,4.14e-07,9|ontology_enrichment_development_v019=CL:0000790;2.14e-21;18!CL:0000051;7.49e-10;53|ontology_enrichment_disease=DOID:2531!5.20e-12!51;DOID:0060083!5.20e-12!51;DOID:1240!1.59e-09!39|ontology_enrichment_disease_v019=DOID:8692;3.32e-08;31!DOID:1240;4.10e-07;39!DOID:2531;8.47e-07;51!DOID:0060083;8.47e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,1.04e-09,51;DOID:0060083,1.04e-09,51;DOID:1240,4.65e-09,39;DOID:8692,9.25e-09,31|ontology_enrichment_uberon=UBERON:0000178!4.35e-18!15;UBERON:0000179!4.35e-18!15;UBERON:0000463!4.35e-18!15;UBERON:0002390!3.71e-16!102;UBERON:0003061!3.71e-16!102;UBERON:0002193!2.00e-15!112;UBERON:0004177!9.99e-10!7;UBERON:0002370!3.94e-07!4;UBERON:0005058!3.94e-07!4;UBERON:0009113!3.94e-07!4;UBERON:0003295!3.94e-07!4;UBERON:0005562!3.94e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-20;15!UBERON:0000179;1.77e-20;15!UBERON:0000463;1.77e-20;15!UBERON:0002390;8.12e-11;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.32e-20,15;UBERON:0000179,1.32e-20,15;UBERON:0000463,1.32e-20,15;UBERON:0002390,3.52e-07,98;UBERON:0003061,3.52e-07,98;UBERON:0002370,7.54e-07,4;UBERON:0005058,7.54e-07,4;UBERON:0009113,7.54e-07,4;UBERON:0003295,7.54e-07,4;UBERON:0005562,7.54e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,0.492603536699674,1.25937250101887,0.393364276848904,0.383829398097213,0,0,0,0,0.46480320348181,0.142169232487422,0.293600439334847,0,1.00272223735071,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,1.29096936716765,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0,0,2.64342657158052,2.24203425192614,1.05353633910031,6.88484195398416,5.10913991573914,6.5792479679843,1.33749196312542,1.95553359980154,0,9.74133642039557,6.35039604245489,2.06224135232386,1.77227115666897,4.60366568400527,3.45846563259323,5.07231455483525,4.93313713811028,7.73780049800375,7.82468331484642,9.93519973185805,8.82884732696053,12.5442628565972,4.53237370790265,5.3650869104269,6.52892146416997,8.34964983664359,2.86708872891687,0.651083453856419,0.950452044448374,2.86092726247768,5.50342427963999,4.99722906209383,3.31488152861624,0.821127996921047,1.00803371612366,0.802320587350522,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18048339180511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.5011001769242,17.2574930665923,1.86595303986695,1.8735593944205,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29109 | |||
|TSSclassifier=S | |||
|UniProt=A2RU30 | |||
|association_with_transcript=-3bp_to_ENST00000449076,NM_001136030,uc001sgo.3,uc010spd.1_5end | |||
|coexpression_cluster_id=C1020 | |||
|description=CAGE_peak_4_at_KIAA0748_5end | |||
|id=chr12:55378459..55378469,- | |||
|ontology_enrichment_celltype=CL:0000988!2.16e-40!182;CL:0000037!4.99e-40!172;CL:0000566!4.99e-40!172;CL:0002032!1.04e-35!165;CL:0000837!1.04e-35!165;CL:0000738!7.40e-32!140;CL:0000542!1.43e-31!53;CL:0000051!1.43e-31!53;CL:0000838!1.29e-30!52;CL:0000084!1.35e-28!25;CL:0000827!1.35e-28!25;CL:0002031!2.11e-27!124;CL:0000791!1.13e-25!18;CL:0000789!1.13e-25!18;CL:0002420!1.13e-25!18;CL:0002419!1.13e-25!18;CL:0000790!1.13e-25!18;CL:0002087!2.79e-25!119;CL:0000625!6.84e-16!11;CL:0000624!1.26e-10!6;CL:0000763!1.93e-10!112;CL:0000049!1.93e-10!112;CL:0000080!9.11e-10!6;CL:0002274!5.12e-09!5;CL:0000457!5.12e-09!5;CL:0002191!5.12e-09!5;CL:0000097!5.12e-09!5;CL:0000831!5.12e-09!5;CL:0002028!5.12e-09!5;CL:0000134!1.00e-07!358;CL:0002320!3.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.80e-22;25!CL:0000791;2.14e-21;18!CL:0000789;2.14e-21;18!CL:0002419;2.14e-21;18!CL:0000624;1.65e-15;6!CL:0000097;7.44e-13;5!CL:0000625;1.81e-10;11!CL:0000542;7.49e-10;53!CL:0000226;2.04e-08;3!CL:0000842;2.04e-08;3!CL:0000898;3.77e-08;3!CL:0000623;1.20e-07;3!CL:0000163;5.97e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.21e-23,177;CL:0000084,2.77e-22,25;CL:0000827,2.77e-22,25;CL:0000791,1.76e-21,18;CL:0000789,1.76e-21,18;CL:0002420,1.76e-21,18;CL:0002419,1.76e-21,18;CL:0000790,1.76e-21,18;CL:0000037,2.96e-21,168;CL:0000838,4.53e-19,52;CL:0000542,1.36e-18,53;CL:0000051,1.36e-18,53;CL:0002032,8.36e-18,161;CL:0000837,8.36e-18,161;CL:0000624,1.17e-15,6;CL:0000738,8.07e-14,136;CL:0000097,3.71e-13,5;CL:0002028,3.71e-13,5;CL:0002031,3.04e-11,120;CL:0000625,1.89e-10,11;CL:0002087,4.93e-10,115;CL:0000226,1.81e-08,3;CL:0000842,1.81e-08,3;CL:0000898,2.99e-08,3;CL:0000623,1.29e-07,3;CL:0000825,1.29e-07,3;CL:0000163,4.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.14e-21;18!CL:0000051;7.49e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!5.20e-12!51;DOID:0060083!5.20e-12!51;DOID:1240!1.59e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.32e-08;31!DOID:1240;4.10e-07;39!DOID:2531;8.47e-07;51!DOID:0060083;8.47e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.04e-09,51;DOID:0060083,1.04e-09,51;DOID:1240,4.65e-09,39;DOID:8692,9.25e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.35e-18!15;UBERON:0000179!4.35e-18!15;UBERON:0000463!4.35e-18!15;UBERON:0002390!3.71e-16!102;UBERON:0003061!3.71e-16!102;UBERON:0002193!2.00e-15!112;UBERON:0004177!9.99e-10!7;UBERON:0002370!3.94e-07!4;UBERON:0005058!3.94e-07!4;UBERON:0009113!3.94e-07!4;UBERON:0003295!3.94e-07!4;UBERON:0005562!3.94e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-20;15!UBERON:0000179;1.77e-20;15!UBERON:0000463;1.77e-20;15!UBERON:0002390;8.12e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.32e-20,15;UBERON:0000179,1.32e-20,15;UBERON:0000463,1.32e-20,15;UBERON:0002390,3.52e-07,98;UBERON:0003061,3.52e-07,98;UBERON:0002370,7.54e-07,4;UBERON:0005058,7.54e-07,4;UBERON:0009113,7.54e-07,4;UBERON:0003295,7.54e-07,4;UBERON:0005562,7.54e-07,4 | |||
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|short_description=p4@KIAA0748 | |||
}} |
Revision as of 23:26, 10 September 2013
Short description: | p4@KIAA0748 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KIAA0748_5end |
Coexpression cluster: | C1020_Mast_CD4_acute_chronic_CD8_thymus_Peripheral |
Association with transcript: | -3bp_to_ENST00000449076, NM_001136030, uc001sgo.3, uc010spd.1_5end |
EntrezGene: | KIAA0748 |
HGNC: | 29109 |
UniProt: | A2RU30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.21e-23 | 177 |
T cell | 2.77e-22 | 25 |
pro-T cell | 2.77e-22 | 25 |
mature alpha-beta T cell | 1.76e-21 | 18 |
alpha-beta T cell | 1.76e-21 | 18 |
immature T cell | 1.76e-21 | 18 |
mature T cell | 1.76e-21 | 18 |
immature alpha-beta T cell | 1.76e-21 | 18 |
hematopoietic stem cell | 2.96e-21 | 168 |
lymphoid lineage restricted progenitor cell | 4.53e-19 | 52 |
lymphocyte | 1.36e-18 | 53 |
common lymphoid progenitor | 1.36e-18 | 53 |
hematopoietic oligopotent progenitor cell | 8.36e-18 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-18 | 161 |
CD4-positive, alpha-beta T cell | 1.17e-15 | 6 |
leukocyte | 8.07e-14 | 136 |
mast cell | 3.71e-13 | 5 |
basophil mast progenitor cell | 3.71e-13 | 5 |
hematopoietic lineage restricted progenitor cell | 3.04e-11 | 120 |
CD8-positive, alpha-beta T cell | 1.89e-10 | 11 |
nongranular leukocyte | 4.93e-10 | 115 |
single nucleate cell | 1.81e-08 | 3 |
mononuclear cell | 1.81e-08 | 3 |
naive T cell | 2.99e-08 | 3 |
natural killer cell | 1.29e-07 | 3 |
pro-NK cell | 1.29e-07 | 3 |
endocrine cell | 4.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.32e-20 | 15 |
haemolymphatic fluid | 1.32e-20 | 15 |
organism substance | 1.32e-20 | 15 |
hematopoietic system | 3.52e-07 | 98 |
blood island | 3.52e-07 | 98 |
thymus | 7.54e-07 | 4 |
hemolymphoid system gland | 7.54e-07 | 4 |
thymic region | 7.54e-07 | 4 |
pharyngeal gland | 7.54e-07 | 4 |
thymus primordium | 7.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.04e-09 | 51 |
immune system cancer | 1.04e-09 | 51 |
leukemia | 4.65e-09 | 39 |
myeloid leukemia | 9.25e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.