FFCP PHASE1:Hg19::chr12:58026426..58026438,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4117|TSSclassifier=S|UniProt=B4DE26,F8VSE0,F8W1A7|association_with_transcript=0bp_to_ENST00000418555,ENST00000552219,ENST00000552798_5end|description=CAGE_peak_3_at_B4GALNT1_5end|id=chr12:58026426..58026438,-|ontology_enrichment_celltype=CL:0002319!4.44e-09!25;CL:0000055!2.02e-08!180;CL:0000095!6.48e-08!17;CL:0000123!6.48e-08!17;CL:0000243!2.40e-07!15;CL:0000125!2.40e-07!15;CL:0000030!2.40e-07!15;CL:0000339!2.40e-07!15|ontology_enrichment_celltype_v019=CL:1000306;5.41e-07;4!CL:0002547;5.41e-07;4|ontology_enrichment_celltype_v019_2=CL:1000306,3.29e-07,4;CL:0002547,3.29e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.85e-26!82;UBERON:0000073!4.81e-26!94;UBERON:0001016!4.81e-26!94;UBERON:0005743!1.08e-24!86;UBERON:0000955!1.28e-22!69;UBERON:0006238!1.28e-22!69;UBERON:0001049!3.46e-21!57;UBERON:0005068!3.46e-21!57;UBERON:0006241!3.46e-21!57;UBERON:0007135!3.46e-21!57;UBERON:0002780!3.77e-17!41;UBERON:0001890!3.77e-17!41;UBERON:0006240!3.77e-17!41;UBERON:0002616!1.08e-16!59;UBERON:0001869!1.44e-16!32;UBERON:0003080!2.28e-16!42;UBERON:0002020!4.73e-16!34;UBERON:0003528!4.73e-16!34;UBERON:0001893!9.77e-16!34;UBERON:0003075!1.32e-15!86;UBERON:0007284!1.32e-15!86;UBERON:0002791!4.12e-15!33;UBERON:0004121!6.25e-15!169;UBERON:0002346!6.65e-14!90;UBERON:0000924!7.95e-14!173;UBERON:0006601!7.95e-14!173;UBERON:0000956!2.15e-13!25;UBERON:0000203!2.15e-13!25;UBERON:0000475!2.37e-13!365;UBERON:0002619!3.99e-12!22;UBERON:0007023!5.93e-12!115;UBERON:0000025!9.13e-12!194;UBERON:0000033!3.21e-11!123;UBERON:0001950!4.30e-11!20;UBERON:0000153!5.73e-11!129;UBERON:0007811!5.73e-11!129;UBERON:0004111!1.39e-10!241;UBERON:0003056!4.39e-10!61;UBERON:0000119!1.59e-08!312;UBERON:0000483!1.91e-08!309;UBERON:0000477!1.32e-07!286;UBERON:0000468!5.55e-07!659;UBERON:0000467!5.99e-07!625;UBERON:0004573!7.44e-07!33;UBERON:0004571!7.44e-07!33;UBERON:0000480!7.79e-07!626|ontology_enrichment_uberon_v019=UBERON:0003528;2.11e-16;34!UBERON:0002020;2.11e-16;34!UBERON:0001869;2.61e-16;32!UBERON:0002791;5.44e-15;32!UBERON:0000956;5.96e-15;25!UBERON:0000203;5.96e-15;25!UBERON:0001893;2.17e-14;34!UBERON:0002619;8.23e-14;22!UBERON:0000955;4.34e-12;68!UBERON:0001950;6.86e-12;20!UBERON:0000073;7.35e-12;53!UBERON:0002616;7.35e-12;53!UBERON:0002780;1.52e-11;41!UBERON:0001890;1.52e-11;41!UBERON:0001016;7.44e-10;83!UBERON:0001017;1.33e-09;75!UBERON:0004573;7.67e-08;33!UBERON:0004571;7.67e-08;33!UBERON:0002680;9.87e-08;9!UBERON:0001895;9.87e-08;9!UBERON:0004733;5.17e-07;12!UBERON:0002028;5.17e-07;12!UBERON:0004797;5.41e-07;4!UBERON:0000415;5.41e-07;4!UBERON:0007240;5.41e-07;4!UBERON:0005742;5.41e-07;4!UBERON:0005734;5.41e-07;4!UBERON:0004664;5.41e-07;4!UBERON:0004663;5.41e-07;4!UBERON:0000349;7.46e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-28,89;UBERON:0001017,1.37e-28,81;UBERON:0000955,4.44e-24,68;UBERON:0006238,4.44e-24,68;UBERON:0000073,1.73e-21,53;UBERON:0002616,1.73e-21,53;UBERON:0001049,3.34e-21,56;UBERON:0005068,3.34e-21,56;UBERON:0006241,3.34e-21,56;UBERON:0007135,3.34e-21,56;UBERON:0001869,1.48e-18,32;UBERON:0003528,1.65e-18,34;UBERON:0002020,1.65e-18,34;UBERON:0001893,4.36e-17,34;UBERON:0002791,9.91e-17,32;UBERON:0002780,6.14e-16,41;UBERON:0001890,6.14e-16,41;UBERON:0003080,6.14e-16,41;UBERON:0006240,6.14e-16,41;UBERON:0000956,3.04e-15,25;UBERON:0000203,3.04e-15,25;UBERON:0002619,2.35e-14,22;UBERON:0000025,5.43e-13,192;UBERON:0001950,1.67e-12,20;UBERON:0003075,3.20e-12,82;UBERON:0007284,3.20e-12,82;UBERON:0004121,1.90e-11,171;UBERON:0000924,1.90e-11,171;UBERON:0006601,1.90e-11,171;UBERON:0002346,3.24e-11,86;UBERON:0010314,4.70e-10,132;UBERON:0004111,8.25e-10,240;UBERON:0004573,1.33e-09,33;UBERON:0004571,1.33e-09,33;UBERON:0011216,1.72e-09,223;UBERON:0003056,2.71e-09,61;UBERON:0010371,1.69e-08,104;UBERON:0002680,1.25e-07,9;UBERON:0001895,1.25e-07,9;UBERON:0010092,1.25e-07,9;UBERON:0001637,1.68e-07,42;UBERON:0003509,1.68e-07,42;UBERON:0004572,1.68e-07,42;UBERON:0000349,3.25e-07,5;UBERON:0000415,3.29e-07,4;UBERON:0007240,3.29e-07,4;UBERON:0005742,3.29e-07,4;UBERON:0005734,3.29e-07,4;UBERON:0004664,3.29e-07,4;UBERON:0004663,3.29e-07,4;UBERON:0004733,6.35e-07,12;UBERON:0002028,6.35e-07,12;UBERON:0007277,6.35e-07,12|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,1.25381888591235,1.14494394852423,1.09499540058307,0.753255837568817,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.289693037921647,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4117 | |||
|TSSclassifier=S | |||
|UniProt=B4DE26,F8VSE0,F8W1A7 | |||
|association_with_transcript=0bp_to_ENST00000418555,ENST00000552219,ENST00000552798_5end | |||
|description=CAGE_peak_3_at_B4GALNT1_5end | |||
|id=chr12:58026426..58026438,- | |||
|ontology_enrichment_celltype=CL:0002319!4.44e-09!25;CL:0000055!2.02e-08!180;CL:0000095!6.48e-08!17;CL:0000123!6.48e-08!17;CL:0000243!2.40e-07!15;CL:0000125!2.40e-07!15;CL:0000030!2.40e-07!15;CL:0000339!2.40e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:1000306;5.41e-07;4!CL:0002547;5.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.29e-07,4;CL:0002547,3.29e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@B4GALNT1 | |||
}} |
Revision as of 23:43, 10 September 2013
Short description: | p3@B4GALNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_B4GALNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418555, ENST00000552219, ENST00000552798_5end |
EntrezGene: | B4GALNT1 |
HGNC: | 4117 |
UniProt: | B4DE26F8VSE0F8W1A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.29e-07 | 4 |
fibroblast of the aortic adventitia | 3.29e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.