FFCP PHASE1:Hg19::chr12:72451150..72451167,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000548885_5end|coexpression_cluster_id=C15|description=CAGE_peak_2_at_ENST00000548885_5end|id=chr12:72451150..72451167,-|ontology_enrichment_celltype=CL:0000077!6.63e-32!19;CL:0000349!5.62e-20!3;CL:0002577!5.62e-20!3;CL:0000076!9.78e-15!62;CL:0002097!3.99e-14!2;CL:0002537!1.87e-12!5;CL:0000174!1.04e-09!3;CL:0000213!1.81e-09!57;CL:0000215!1.81e-09!57;CL:0002166!2.53e-09!3;CL:0002541!3.26e-09!3;CL:0000066!1.63e-08!254|ontology_enrichment_celltype_v019=CL:0002577;1.14e-24;3!CL:0000077;9.48e-24;19!CL:0002537;1.30e-15;5!CL:0000349;1.50e-15;19!CL:0002097;1.72e-10;2!CL:0000174;2.05e-07;3!CL:0000076;2.65e-07;63!CL:0002166;2.97e-07;3|ontology_enrichment_celltype_v019_2=CL:0002577,1.29e-24,3;CL:0000077,9.94e-24,19;CL:0002537,1.30e-15,5;CL:0000349,1.55e-15,19;CL:0002097,1.72e-10,2;CL:0000076,3.35e-10,63;CL:0000213,7.67e-08,58;CL:0000215,7.67e-08,58;CL:0000174,2.05e-07,3;CL:0002166,2.63e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.30e-28!14;UBERON:0000158!3.30e-28!14;UBERON:0003124!1.63e-22!7;UBERON:0000478!5.62e-16!24;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0002369!1.04e-09!3;UBERON:0001235!1.04e-09!3;UBERON:0006858!1.04e-09!3;UBERON:0000476!3.26e-09!3;UBERON:0000920!3.26e-09!3;UBERON:0000305!5.00e-09!7;UBERON:0004871!5.94e-08!8;UBERON:0001282!1.91e-07!1;UBERON:0009842!1.91e-07!1;UBERON:0003704!1.91e-07!1;UBERON:0001171!1.91e-07!1;UBERON:0001172!1.91e-07!1;UBERON:0001708!3.38e-07!4;UBERON:0001704!3.38e-07!4;UBERON:0002394!4.76e-07!4;UBERON:0003928!4.76e-07!4|ontology_enrichment_uberon_v019=UBERON:0001987;8.88e-19;4!UBERON:0000478;2.17e-12;24!UBERON:0000305;1.97e-11;7!UBERON:0005631;2.82e-08;10!UBERON:0000158;2.82e-08;10!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.28e-21,14;UBERON:0000158,6.28e-21,14;UBERON:0001987,9.72e-19,4;UBERON:0004340,9.72e-19,4;UBERON:0000478,2.23e-12,24;UBERON:0000305,1.97e-11,7;UBERON:0003124,3.85e-11,7;UBERON:0004871,4.03e-10,8;UBERON:0002369,2.05e-07,3;UBERON:0001235,2.05e-07,3;UBERON:0006858,2.05e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84780341018745,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,8.61197574414652,4.91457123358771,0,0,0,0,21.3236662209273,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0.963099152036517,5.78992296712299,0,1.13352962756136,2.77826969188601,0,0,0,2.85069264452319,0.353378291891762,1.73622634443823,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@ENST00000548885}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000548885_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_2_at_ENST00000548885_5end | |||
|id=chr12:72451150..72451167,- | |||
|ontology_enrichment_celltype=CL:0000077!6.63e-32!19;CL:0000349!5.62e-20!3;CL:0002577!5.62e-20!3;CL:0000076!9.78e-15!62;CL:0002097!3.99e-14!2;CL:0002537!1.87e-12!5;CL:0000174!1.04e-09!3;CL:0000213!1.81e-09!57;CL:0000215!1.81e-09!57;CL:0002166!2.53e-09!3;CL:0002541!3.26e-09!3;CL:0000066!1.63e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.14e-24;3!CL:0000077;9.48e-24;19!CL:0002537;1.30e-15;5!CL:0000349;1.50e-15;19!CL:0002097;1.72e-10;2!CL:0000174;2.05e-07;3!CL:0000076;2.65e-07;63!CL:0002166;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.29e-24,3;CL:0000077,9.94e-24,19;CL:0002537,1.30e-15,5;CL:0000349,1.55e-15,19;CL:0002097,1.72e-10,2;CL:0000076,3.35e-10,63;CL:0000213,7.67e-08,58;CL:0000215,7.67e-08,58;CL:0000174,2.05e-07,3;CL:0002166,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.30e-28!14;UBERON:0000158!3.30e-28!14;UBERON:0003124!1.63e-22!7;UBERON:0000478!5.62e-16!24;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0002369!1.04e-09!3;UBERON:0001235!1.04e-09!3;UBERON:0006858!1.04e-09!3;UBERON:0000476!3.26e-09!3;UBERON:0000920!3.26e-09!3;UBERON:0000305!5.00e-09!7;UBERON:0004871!5.94e-08!8;UBERON:0001282!1.91e-07!1;UBERON:0009842!1.91e-07!1;UBERON:0003704!1.91e-07!1;UBERON:0001171!1.91e-07!1;UBERON:0001172!1.91e-07!1;UBERON:0001708!3.38e-07!4;UBERON:0001704!3.38e-07!4;UBERON:0002394!4.76e-07!4;UBERON:0003928!4.76e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.88e-19;4!UBERON:0000478;2.17e-12;24!UBERON:0000305;1.97e-11;7!UBERON:0005631;2.82e-08;10!UBERON:0000158;2.82e-08;10!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.28e-21,14;UBERON:0000158,6.28e-21,14;UBERON:0001987,9.72e-19,4;UBERON:0004340,9.72e-19,4;UBERON:0000478,2.23e-12,24;UBERON:0000305,1.97e-11,7;UBERON:0003124,3.85e-11,7;UBERON:0004871,4.03e-10,8;UBERON:0002369,2.05e-07,3;UBERON:0001235,2.05e-07,3;UBERON:0006858,2.05e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84780341018745,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,8.61197574414652,4.91457123358771,0,0,0,0,21.3236662209273,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0.963099152036517,5.78992296712299,0,1.13352962756136,2.77826969188601,0,0,0,2.85069264452319,0.353378291891762,1.73622634443823,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000548885 | |||
}} |
Revision as of 00:23, 11 September 2013
Short description: | p2@ENST00000548885 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000548885_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000548885_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.29e-24 | 3 |
mesothelial cell | 9.94e-24 | 19 |
amnion mesenchymal stem cell | 1.30e-15 | 5 |
extraembryonic cell | 1.55e-15 | 19 |
cortical cell of adrenal gland | 1.72e-10 | 2 |
squamous epithelial cell | 3.35e-10 | 63 |
lining cell | 7.67e-08 | 58 |
barrier cell | 7.67e-08 | 58 |
steroid hormone secreting cell | 2.05e-07 | 3 |
epithelial cell of Malassez | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.28e-21 | 14 |
membranous layer | 6.28e-21 | 14 |
placenta | 9.72e-19 | 4 |
allantois | 9.72e-19 | 4 |
extraembryonic structure | 2.23e-12 | 24 |
amnion | 1.97e-11 | 7 |
chorion | 3.85e-11 | 7 |
somatic layer of lateral plate mesoderm | 4.03e-10 | 8 |
adrenal gland | 2.05e-07 | 3 |
adrenal cortex | 2.05e-07 | 3 |
adrenal/interrenal gland | 2.05e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.