FFCP PHASE1:Hg19::chr13:46952645..46952692,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80183|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20420|TSSclassifier=S|UniProt=A8XR14|association_with_transcript=87bp_to_ENST00000439642_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_KIAA0226L_5end|id=chr13:46952645..46952692,-|ontology_enrichment_celltype=CL:0002057!2.33e-69!42;CL:0000860!7.33e-64!45;CL:0000766!7.04e-60!76;CL:0000738!1.96e-56!140;CL:0002194!1.00e-50!63;CL:0000576!1.00e-50!63;CL:0000040!1.00e-50!63;CL:0000559!1.00e-50!63;CL:0002087!1.17e-49!119;CL:0002009!9.15e-49!65;CL:0000037!9.82e-47!172;CL:0000566!9.82e-47!172;CL:0000988!1.65e-44!182;CL:0000839!2.37e-44!70;CL:0000557!1.52e-43!71;CL:0002032!1.24e-41!165;CL:0000837!1.24e-41!165;CL:0002031!1.31e-41!124;CL:0000763!6.28e-39!112;CL:0000049!6.28e-39!112;CL:0000094!7.22e-17!8;CL:0000081!1.40e-14!11;CL:0000134!7.09e-13!358;CL:0002320!2.87e-12!365;CL:0000219!3.75e-10!390;CL:0002393!1.20e-09!9;CL:0002397!1.20e-09!9;CL:0000775!5.90e-08!3;CL:0000048!1.10e-07!430;CL:0000034!2.30e-07!444;CL:0000723!2.43e-07!436|ontology_enrichment_celltype_v019=CL:0000860;7.26e-63;33!CL:0002057;7.26e-63;33!CL:0000473;2.06e-43;39!CL:0000234;2.06e-43;39!CL:0000576;2.51e-34;48!CL:0000766;6.71e-28;69!CL:0000094;2.87e-23;8!CL:0000081;1.24e-16;11!CL:0000763;2.93e-14;100!CL:0002087;3.65e-13;104!CL:0000775;4.70e-13;3!CL:0000771;2.51e-09;2!CL:0000738;2.99e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-62,42;CL:0002057,2.69e-62,42;CL:0000766,2.73e-61,72;CL:0000473,1.31e-53,48;CL:0000234,1.31e-53,48;CL:0002194,7.61e-48,59;CL:0000576,7.61e-48,59;CL:0000040,7.61e-48,59;CL:0000559,7.61e-48,59;CL:0002009,4.68e-46,61;CL:0000839,4.73e-42,66;CL:0000557,2.54e-41,67;CL:0000738,3.43e-38,136;CL:0000763,4.47e-38,108;CL:0000049,4.47e-38,108;CL:0002087,3.47e-30,115;CL:0000037,4.07e-29,168;CL:0002032,2.24e-27,161;CL:0000837,2.24e-27,161;CL:0000988,3.75e-27,177;CL:0002031,6.61e-25,120;CL:0000094,2.69e-23,8;CL:0000081,1.18e-16,11;CL:0000775,4.71e-13,3;CL:0000771,2.51e-09,2;CL:0000134,7.71e-09,354;CL:0002320,1.73e-08,361;CL:0000219,2.94e-07,386|ontology_enrichment_development_v019=CL:0002057;6.56e-44;42!CL:0000049;2.64e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.79e-55!102;UBERON:0003061!9.79e-55!102;UBERON:0002193!2.55e-48!112;UBERON:0002371!4.41e-39!80;UBERON:0001474!1.99e-35!86;UBERON:0004765!1.04e-29!101;UBERON:0001434!1.04e-29!101;UBERON:0002405!9.54e-26!115;UBERON:0000178!2.16e-18!15;UBERON:0000179!2.16e-18!15;UBERON:0000463!2.16e-18!15;UBERON:0003081!4.70e-17!216;UBERON:0002204!9.28e-14!167;UBERON:0002384!1.91e-11!375|ontology_enrichment_uberon_v019=UBERON:0000178;6.23e-24;15!UBERON:0000179;6.23e-24;15!UBERON:0000463;6.23e-24;15!UBERON:0002390;7.31e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.20e-51,98;UBERON:0003061,4.20e-51,98;UBERON:0002193,1.52e-45,108;UBERON:0002371,1.32e-35,76;UBERON:0001474,1.74e-32,82;UBERON:0004765,5.75e-29,90;UBERON:0002405,8.39e-28,93;UBERON:0001434,2.34e-25,100;UBERON:0000178,7.33e-24,15;UBERON:0000179,7.33e-24,15;UBERON:0000463,7.33e-24,15;UBERON:0003081,6.11e-20,203;UBERON:0002204,2.13e-13,167;UBERON:0000926,5.05e-12,315;UBERON:0004120,5.05e-12,315;UBERON:0006603,5.05e-12,315;UBERON:0002384,5.19e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,4.43196326825502,2.4065333696417,0.434021741431704,0,0,0,0.290796477559129,3.77875943688809,0.727752183563449,0.929716147622738,6.57868620834921,2.78735733805593,0.28769239232215,5.63553554364021,7.56743135643473,2.75796544589295,8.39130088658974,9.47985406160392,0.941211697713023,1.09162460023138,3.59557575112135,3.06083892370903,14.7627352455003,14.0654167675789,1.31940520074686,1.99463657621632,0.852449501065388,1.45104619314292,9.07816359505824,10.5879782329248,0.502497330513487,4.17186334736161,4.77815458351257,1.81619850790011,18.4138817993782,16.1395817594851,0,0.425208599930087,0.838634582033504,1.79725809834392,1.35159203557356,1.28580469357664,0.285012743741249,0,0.182664153764634,0,1.09227722252426,0,2.98711155796555,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0.947109008176067,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.555788215539,104.700671320048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,80.8927585862957,47.86583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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20420 | |||
|TSSclassifier=S | |||
|UniProt=A8XR14 | |||
|association_with_transcript=87bp_to_ENST00000439642_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_KIAA0226L_5end | |||
|id=chr13:46952645..46952692,- | |||
|ontology_enrichment_celltype=CL:0002057!2.33e-69!42;CL:0000860!7.33e-64!45;CL:0000766!7.04e-60!76;CL:0000738!1.96e-56!140;CL:0002194!1.00e-50!63;CL:0000576!1.00e-50!63;CL:0000040!1.00e-50!63;CL:0000559!1.00e-50!63;CL:0002087!1.17e-49!119;CL:0002009!9.15e-49!65;CL:0000037!9.82e-47!172;CL:0000566!9.82e-47!172;CL:0000988!1.65e-44!182;CL:0000839!2.37e-44!70;CL:0000557!1.52e-43!71;CL:0002032!1.24e-41!165;CL:0000837!1.24e-41!165;CL:0002031!1.31e-41!124;CL:0000763!6.28e-39!112;CL:0000049!6.28e-39!112;CL:0000094!7.22e-17!8;CL:0000081!1.40e-14!11;CL:0000134!7.09e-13!358;CL:0002320!2.87e-12!365;CL:0000219!3.75e-10!390;CL:0002393!1.20e-09!9;CL:0002397!1.20e-09!9;CL:0000775!5.90e-08!3;CL:0000048!1.10e-07!430;CL:0000034!2.30e-07!444;CL:0000723!2.43e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.26e-63;33!CL:0002057;7.26e-63;33!CL:0000473;2.06e-43;39!CL:0000234;2.06e-43;39!CL:0000576;2.51e-34;48!CL:0000766;6.71e-28;69!CL:0000094;2.87e-23;8!CL:0000081;1.24e-16;11!CL:0000763;2.93e-14;100!CL:0002087;3.65e-13;104!CL:0000775;4.70e-13;3!CL:0000771;2.51e-09;2!CL:0000738;2.99e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-62,42;CL:0002057,2.69e-62,42;CL:0000766,2.73e-61,72;CL:0000473,1.31e-53,48;CL:0000234,1.31e-53,48;CL:0002194,7.61e-48,59;CL:0000576,7.61e-48,59;CL:0000040,7.61e-48,59;CL:0000559,7.61e-48,59;CL:0002009,4.68e-46,61;CL:0000839,4.73e-42,66;CL:0000557,2.54e-41,67;CL:0000738,3.43e-38,136;CL:0000763,4.47e-38,108;CL:0000049,4.47e-38,108;CL:0002087,3.47e-30,115;CL:0000037,4.07e-29,168;CL:0002032,2.24e-27,161;CL:0000837,2.24e-27,161;CL:0000988,3.75e-27,177;CL:0002031,6.61e-25,120;CL:0000094,2.69e-23,8;CL:0000081,1.18e-16,11;CL:0000775,4.71e-13,3;CL:0000771,2.51e-09,2;CL:0000134,7.71e-09,354;CL:0002320,1.73e-08,361;CL:0000219,2.94e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.56e-44;42!CL:0000049;2.64e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.79e-55!102;UBERON:0003061!9.79e-55!102;UBERON:0002193!2.55e-48!112;UBERON:0002371!4.41e-39!80;UBERON:0001474!1.99e-35!86;UBERON:0004765!1.04e-29!101;UBERON:0001434!1.04e-29!101;UBERON:0002405!9.54e-26!115;UBERON:0000178!2.16e-18!15;UBERON:0000179!2.16e-18!15;UBERON:0000463!2.16e-18!15;UBERON:0003081!4.70e-17!216;UBERON:0002204!9.28e-14!167;UBERON:0002384!1.91e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.23e-24;15!UBERON:0000179;6.23e-24;15!UBERON:0000463;6.23e-24;15!UBERON:0002390;7.31e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.20e-51,98;UBERON:0003061,4.20e-51,98;UBERON:0002193,1.52e-45,108;UBERON:0002371,1.32e-35,76;UBERON:0001474,1.74e-32,82;UBERON:0004765,5.75e-29,90;UBERON:0002405,8.39e-28,93;UBERON:0001434,2.34e-25,100;UBERON:0000178,7.33e-24,15;UBERON:0000179,7.33e-24,15;UBERON:0000463,7.33e-24,15;UBERON:0003081,6.11e-20,203;UBERON:0002204,2.13e-13,167;UBERON:0000926,5.05e-12,315;UBERON:0004120,5.05e-12,315;UBERON:0006603,5.05e-12,315;UBERON:0002384,5.19e-08,371 | |||
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|short_description=p3@KIAA0226L | |||
}} |
Revision as of 02:25, 11 September 2013
Short description: | p3@KIAA0226L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KIAA0226L_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 87bp_to_ENST00000439642_5end |
EntrezGene: | KIAA0226L |
HGNC: | 20420 |
UniProt: | A8XR14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.69e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-62 | 42 |
myeloid leukocyte | 2.73e-61 | 72 |
defensive cell | 1.31e-53 | 48 |
phagocyte | 1.31e-53 | 48 |
monopoietic cell | 7.61e-48 | 59 |
monocyte | 7.61e-48 | 59 |
monoblast | 7.61e-48 | 59 |
promonocyte | 7.61e-48 | 59 |
macrophage dendritic cell progenitor | 4.68e-46 | 61 |
myeloid lineage restricted progenitor cell | 4.73e-42 | 66 |
granulocyte monocyte progenitor cell | 2.54e-41 | 67 |
leukocyte | 3.43e-38 | 136 |
myeloid cell | 4.47e-38 | 108 |
common myeloid progenitor | 4.47e-38 | 108 |
nongranular leukocyte | 3.47e-30 | 115 |
hematopoietic stem cell | 4.07e-29 | 168 |
hematopoietic oligopotent progenitor cell | 2.24e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-27 | 161 |
hematopoietic cell | 3.75e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 6.61e-25 | 120 |
granulocyte | 2.69e-23 | 8 |
blood cell | 1.18e-16 | 11 |
neutrophil | 4.71e-13 | 3 |
eosinophil | 2.51e-09 | 2 |
mesenchymal cell | 7.71e-09 | 354 |
connective tissue cell | 1.73e-08 | 361 |
motile cell | 2.94e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.20e-51 | 98 |
blood island | 4.20e-51 | 98 |
hemolymphoid system | 1.52e-45 | 108 |
bone marrow | 1.32e-35 | 76 |
bone element | 1.74e-32 | 82 |
skeletal element | 5.75e-29 | 90 |
immune system | 8.39e-28 | 93 |
skeletal system | 2.34e-25 | 100 |
blood | 7.33e-24 | 15 |
haemolymphatic fluid | 7.33e-24 | 15 |
organism substance | 7.33e-24 | 15 |
lateral plate mesoderm | 6.11e-20 | 203 |
musculoskeletal system | 2.13e-13 | 167 |
mesoderm | 5.05e-12 | 315 |
mesoderm-derived structure | 5.05e-12 | 315 |
presumptive mesoderm | 5.05e-12 | 315 |
connective tissue | 5.19e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.