FFCP PHASE1:Hg19::chr14:21270074..21270116,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10044|TSSclassifier=S|UniProt=P07998|association_with_transcript=110bp_to_CR450318_5end|coexpression_cluster_id=C67|description=CAGE_peak_5_at_RNASE1_5end|id=chr14:21270074..21270116,-|ontology_enrichment_celltype=CL:0000115!1.44e-16!35;CL:0002078!1.97e-12!44;CL:0002139!6.72e-12!24;CL:0000071!5.99e-09!18;CL:0002546!5.99e-09!18;CL:0000213!2.35e-07!57;CL:0000215!2.35e-07!57|ontology_enrichment_celltype_v019=CL:0000115;1.19e-12;36!CL:0000235;5.16e-08;6!CL:0002188;1.17e-07;5!CL:0002078;1.77e-07;45!CL:0000071;4.82e-07;18!CL:0002139;8.90e-07;24|ontology_enrichment_celltype_v019_2=CL:0000115,4.83e-14,36;CL:0002078,3.35e-11,45;CL:0000235,5.18e-08,6;CL:0002188,1.13e-07,5;CL:0000071,3.82e-07,18;CL:0002546,3.82e-07,18;CL:0002139,8.50e-07,24|ontology_enrichment_development_v019=CL:0002546;4.82e-07;18!UBERON:0006603;8.06e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.87e-66!115;UBERON:0001049!6.27e-23!57;UBERON:0005068!6.27e-23!57;UBERON:0006241!6.27e-23!57;UBERON:0007135!6.27e-23!57;UBERON:0003080!1.30e-18!42;UBERON:0002616!6.37e-18!59;UBERON:0002780!1.18e-17!41;UBERON:0001890!1.18e-17!41;UBERON:0006240!1.18e-17!41;UBERON:0003075!2.02e-17!86;UBERON:0007284!2.02e-17!86;UBERON:0001017!2.76e-17!82;UBERON:0005743!8.94e-17!86;UBERON:0004111!1.81e-16!241;UBERON:0002346!6.41e-16!90;UBERON:0002020!1.22e-15!34;UBERON:0003528!1.22e-15!34;UBERON:0001893!1.75e-15!34;UBERON:0000025!2.53e-15!194;UBERON:0000955!3.15e-15!69;UBERON:0006238!3.15e-15!69;UBERON:0002791!5.29e-15!33;UBERON:0000073!1.08e-14!94;UBERON:0001016!1.08e-14!94;UBERON:0001869!6.36e-14!32;UBERON:0000477!1.04e-13!286;UBERON:0000468!1.60e-12!659;UBERON:0000467!9.55e-12!625;UBERON:0000480!1.20e-11!626;UBERON:0002619!1.36e-11!22;UBERON:0003056!3.73e-11!61;UBERON:0000062!1.62e-10!511;UBERON:0001950!2.61e-10!20;UBERON:0000922!9.58e-10!612;UBERON:0000956!1.42e-09!25;UBERON:0000203!1.42e-09!25;UBERON:0001986!5.99e-09!18;UBERON:0004638!5.99e-09!18;UBERON:0004852!5.99e-09!18;UBERON:0000153!9.88e-09!129;UBERON:0007811!9.88e-09!129;UBERON:0002050!2.05e-08!605;UBERON:0005423!2.05e-08!605;UBERON:0000487!2.15e-08!22;UBERON:0004121!3.69e-08!169;UBERON:0002308!3.71e-08!9;UBERON:0000125!3.71e-08!9;UBERON:0000923!4.07e-08!604;UBERON:0005291!4.07e-08!604;UBERON:0006598!4.07e-08!604;UBERON:0002532!4.07e-08!604;UBERON:0002298!9.76e-08!8;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0000064!1.73e-07!219;UBERON:0000033!1.88e-07!123;UBERON:0006914!7.70e-07!25|ontology_enrichment_uberon_v019=UBERON:0007023;1.87e-18;114!UBERON:0002780;5.21e-09;41!UBERON:0001890;5.21e-09;41!UBERON:0002791;1.19e-08;32!UBERON:0001893;1.46e-08;34!UBERON:0003528;2.07e-08;34!UBERON:0002020;2.07e-08;34!UBERON:0000073;4.69e-08;53!UBERON:0002616;4.69e-08;53!UBERON:0002298;2.38e-07;6!UBERON:0000125;2.88e-07;9!UBERON:0002308;2.88e-07;9!UBERON:0001869;3.14e-07;32!UBERON:0004638;4.82e-07;18!UBERON:0001986;4.82e-07;18!UBERON:0004852;4.82e-07;18!UBERON:0002619;6.13e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.66e-71,114;UBERON:0001049,7.73e-16,56;UBERON:0005068,7.73e-16,56;UBERON:0006241,7.73e-16,56;UBERON:0007135,7.73e-16,56;UBERON:0004111,1.47e-13,240;UBERON:0000073,1.66e-13,53;UBERON:0002616,1.66e-13,53;UBERON:0000025,4.29e-13,192;UBERON:0003075,8.32e-13,82;UBERON:0007284,8.32e-13,82;UBERON:0002346,9.10e-12,86;UBERON:0001017,9.29e-12,81;UBERON:0002780,1.67e-11,41;UBERON:0001890,1.67e-11,41;UBERON:0003080,1.67e-11,41;UBERON:0006240,1.67e-11,41;UBERON:0000955,1.23e-10,68;UBERON:0006238,1.23e-10,68;UBERON:0001016,1.25e-10,89;UBERON:0003528,1.51e-10,34;UBERON:0002020,1.51e-10,34;UBERON:0011216,1.56e-10,223;UBERON:0001893,2.11e-09,34;UBERON:0002050,2.27e-09,564;UBERON:0003887,2.70e-09,12;UBERON:0010314,3.02e-09,132;UBERON:0000923,3.28e-09,560;UBERON:0010316,3.28e-09,560;UBERON:0005291,3.28e-09,560;UBERON:0006598,3.28e-09,560;UBERON:0010317,3.28e-09,560;UBERON:0002532,3.28e-09,560;UBERON:0002791,5.37e-09,32;UBERON:0000922,6.11e-09,592;UBERON:0005423,9.72e-09,581;UBERON:0004876,2.53e-08,11;UBERON:0010371,3.61e-08,104;UBERON:0000080,5.00e-08,9;UBERON:0002120,5.00e-08,9;UBERON:0004875,5.00e-08,9;UBERON:0005721,5.00e-08,9;UBERON:0005754,5.00e-08,9;UBERON:0007297,5.00e-08,9;UBERON:0001869,8.86e-08,32;UBERON:0003056,1.21e-07,61;UBERON:0002298,1.62e-07,6;UBERON:0000125,2.77e-07,9;UBERON:0002308,2.77e-07,9;UBERON:0004638,3.82e-07,18;UBERON:0001986,3.82e-07,18;UBERON:0004852,3.82e-07,18;UBERON:0002619,6.88e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,122.705679883479,110.447740112472,149.136253660194,0.436194716338694,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10044 | |||
|TSSclassifier=S | |||
|UniProt=P07998 | |||
|association_with_transcript=110bp_to_CR450318_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_5_at_RNASE1_5end | |||
|id=chr14:21270074..21270116,- | |||
|ontology_enrichment_celltype=CL:0000115!1.44e-16!35;CL:0002078!1.97e-12!44;CL:0002139!6.72e-12!24;CL:0000071!5.99e-09!18;CL:0002546!5.99e-09!18;CL:0000213!2.35e-07!57;CL:0000215!2.35e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.19e-12;36!CL:0000235;5.16e-08;6!CL:0002188;1.17e-07;5!CL:0002078;1.77e-07;45!CL:0000071;4.82e-07;18!CL:0002139;8.90e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.83e-14,36;CL:0002078,3.35e-11,45;CL:0000235,5.18e-08,6;CL:0002188,1.13e-07,5;CL:0000071,3.82e-07,18;CL:0002546,3.82e-07,18;CL:0002139,8.50e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;4.82e-07;18!UBERON:0006603;8.06e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;1.87e-18;114!UBERON:0002780;5.21e-09;41!UBERON:0001890;5.21e-09;41!UBERON:0002791;1.19e-08;32!UBERON:0001893;1.46e-08;34!UBERON:0003528;2.07e-08;34!UBERON:0002020;2.07e-08;34!UBERON:0000073;4.69e-08;53!UBERON:0002616;4.69e-08;53!UBERON:0002298;2.38e-07;6!UBERON:0000125;2.88e-07;9!UBERON:0002308;2.88e-07;9!UBERON:0001869;3.14e-07;32!UBERON:0004638;4.82e-07;18!UBERON:0001986;4.82e-07;18!UBERON:0004852;4.82e-07;18!UBERON:0002619;6.13e-07;22 | |||
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| |||
|short_description=p5@RNASE1 | |||
}} |
Revision as of 03:41, 11 September 2013
Short description: | p5@RNASE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RNASE1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 110bp_to_CR450318_5end |
EntrezGene: | RNASE1 |
HGNC: | 10044 |
UniProt: | P07998 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.83e-14 | 36 |
meso-epithelial cell | 3.35e-11 | 45 |
macrophage | 5.18e-08 | 6 |
glomerular endothelial cell | 1.13e-07 | 5 |
blood vessel endothelial cell | 3.82e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.82e-07 | 18 |
endothelial cell of vascular tree | 8.50e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.