FFCP PHASE1:Hg19::chr14:22520695..22520726,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-9bp_to_uc001wcx.3_5end|coexpression_cluster_id=C18|description=CAGE_peak_2_at_uc001wcx.3_5end|id=chr14:22520695..22520726,+|ontology_enrichment_celltype=CL:0000791!7.44e-28!18;CL:0000789!7.44e-28!18;CL:0002420!7.44e-28!18;CL:0002419!7.44e-28!18;CL:0000790!7.44e-28!18;CL:0000625!4.81e-20!11;CL:0000084!1.70e-18!25;CL:0000827!1.70e-18!25;CL:0000624!2.11e-11!6;CL:0000838!3.49e-09!52;CL:0000542!6.61e-09!53;CL:0000051!6.61e-09!53;CL:0000738!1.61e-08!140;CL:0000898!8.74e-07!3|ontology_enrichment_celltype_v019=CL:0000791;4.25e-49;18!CL:0000789;4.25e-49;18!CL:0002419;4.25e-49;18!CL:0000625;1.25e-34;11!CL:0000084;4.51e-34;25!CL:0000624;3.60e-19;6!CL:0000898;6.44e-11;3!CL:0000226;8.25e-10;3!CL:0000842;8.25e-10;3!CL:0000542;2.00e-08;53!CL:0000815;6.95e-08;2!CL:0000792;6.95e-08;2!CL:0002677;6.95e-08;2|ontology_enrichment_celltype_v019_2=CL:0000791,4.19e-49,18;CL:0000789,4.19e-49,18;CL:0002420,4.19e-49,18;CL:0002419,4.19e-49,18;CL:0000790,4.19e-49,18;CL:0000625,1.18e-34,11;CL:0000084,4.47e-34,25;CL:0000827,4.47e-34,25;CL:0000624,3.78e-19,6;CL:0000838,6.83e-16,52;CL:0000542,1.66e-15,53;CL:0000051,1.66e-15,53;CL:0000898,6.55e-11,3;CL:0000226,7.29e-10,3;CL:0000842,7.29e-10,3;CL:0000738,3.10e-08,136;CL:0002087,6.28e-08,115;CL:0000815,7.07e-08,2;CL:0000792,7.07e-08,2;CL:0002677,7.07e-08,2|ontology_enrichment_development_v019=CL:0000790;4.25e-49;18!CL:0000051;2.00e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.24e-26!115;UBERON:0000178!1.65e-15!15;UBERON:0000179!1.65e-15!15;UBERON:0000463!1.65e-15!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.97e-27;15!UBERON:0000179;1.97e-27;15!UBERON:0000463;1.97e-27;15!UBERON:0002390;2.93e-19;32!UBERON:0002193;1.36e-13;42!UBERON:0004177;3.02e-10;5!UBERON:0005057;3.02e-10;5!UBERON:0002370;9.70e-08;2!UBERON:0005058;9.70e-08;2!UBERON:0009113;9.70e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.83e-27,15;UBERON:0000179,1.83e-27,15;UBERON:0000463,1.83e-27,15;UBERON:0004177,3.56e-11,7;UBERON:0005057,3.56e-11,7;UBERON:0002370,3.53e-08,4;UBERON:0005058,3.53e-08,4;UBERON:0009113,3.53e-08,4;UBERON:0003295,3.53e-08,4;UBERON:0005562,3.53e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,1.94336199611388,0.77272670290256,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31116379307349,2.75107533924415,8.01845846098086,31.5982476288382,14.340579731878,15.6237775892462,11.6896037044747,25.6244050835899,28.2821671175844,17.9442454612733,34.662894561922,13.8338625303729,43.3097627374395,17.759293697197,37.0309023833037,31.2987332593857,18.8323935215817,11.5042556078577,19.8617495229456,19.9424443147716,16.4784812248826,15.806862492201,24.0368707418528,17.8396632021494,21.4857539772618,19.9594929334159,33.7288266734211,46.8430996825171,28.7340671070395,17.7582939033013,11.4957919568947,1.81446068902259,3.7441627409691,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20304078368662,1.94142780736755,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,6.08937131078603,4.58782324285425,2.84823593587081,13.1027476501784,10.6954191002411,7.13320642311989,7.02040868409549,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0.493217028184668,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_uc001wcx.3_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_uc001wcx.3_5end | |||
|id=chr14:22520695..22520726,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.44e-28!18;CL:0000789!7.44e-28!18;CL:0002420!7.44e-28!18;CL:0002419!7.44e-28!18;CL:0000790!7.44e-28!18;CL:0000625!4.81e-20!11;CL:0000084!1.70e-18!25;CL:0000827!1.70e-18!25;CL:0000624!2.11e-11!6;CL:0000838!3.49e-09!52;CL:0000542!6.61e-09!53;CL:0000051!6.61e-09!53;CL:0000738!1.61e-08!140;CL:0000898!8.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.25e-49;18!CL:0000789;4.25e-49;18!CL:0002419;4.25e-49;18!CL:0000625;1.25e-34;11!CL:0000084;4.51e-34;25!CL:0000624;3.60e-19;6!CL:0000898;6.44e-11;3!CL:0000226;8.25e-10;3!CL:0000842;8.25e-10;3!CL:0000542;2.00e-08;53!CL:0000815;6.95e-08;2!CL:0000792;6.95e-08;2!CL:0002677;6.95e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.19e-49,18;CL:0000789,4.19e-49,18;CL:0002420,4.19e-49,18;CL:0002419,4.19e-49,18;CL:0000790,4.19e-49,18;CL:0000625,1.18e-34,11;CL:0000084,4.47e-34,25;CL:0000827,4.47e-34,25;CL:0000624,3.78e-19,6;CL:0000838,6.83e-16,52;CL:0000542,1.66e-15,53;CL:0000051,1.66e-15,53;CL:0000898,6.55e-11,3;CL:0000226,7.29e-10,3;CL:0000842,7.29e-10,3;CL:0000738,3.10e-08,136;CL:0002087,6.28e-08,115;CL:0000815,7.07e-08,2;CL:0000792,7.07e-08,2;CL:0002677,7.07e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.25e-49;18!CL:0000051;2.00e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-26!115;UBERON:0000178!1.65e-15!15;UBERON:0000179!1.65e-15!15;UBERON:0000463!1.65e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.97e-27;15!UBERON:0000179;1.97e-27;15!UBERON:0000463;1.97e-27;15!UBERON:0002390;2.93e-19;32!UBERON:0002193;1.36e-13;42!UBERON:0004177;3.02e-10;5!UBERON:0005057;3.02e-10;5!UBERON:0002370;9.70e-08;2!UBERON:0005058;9.70e-08;2!UBERON:0009113;9.70e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.83e-27,15;UBERON:0000179,1.83e-27,15;UBERON:0000463,1.83e-27,15;UBERON:0004177,3.56e-11,7;UBERON:0005057,3.56e-11,7;UBERON:0002370,3.53e-08,4;UBERON:0005058,3.53e-08,4;UBERON:0009113,3.53e-08,4;UBERON:0003295,3.53e-08,4;UBERON:0005562,3.53e-08,4 | |||
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|short_description=p2@uc001wcx.3 | |||
}} |
Revision as of 03:49, 11 September 2013
Short description: | p2@uc001wcx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc001wcx.3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -9bp_to_uc001wcx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.19e-49 | 18 |
alpha-beta T cell | 4.19e-49 | 18 |
immature T cell | 4.19e-49 | 18 |
mature T cell | 4.19e-49 | 18 |
immature alpha-beta T cell | 4.19e-49 | 18 |
CD8-positive, alpha-beta T cell | 1.18e-34 | 11 |
T cell | 4.47e-34 | 25 |
pro-T cell | 4.47e-34 | 25 |
CD4-positive, alpha-beta T cell | 3.78e-19 | 6 |
lymphoid lineage restricted progenitor cell | 6.83e-16 | 52 |
lymphocyte | 1.66e-15 | 53 |
common lymphoid progenitor | 1.66e-15 | 53 |
naive T cell | 6.55e-11 | 3 |
single nucleate cell | 7.29e-10 | 3 |
mononuclear cell | 7.29e-10 | 3 |
leukocyte | 3.10e-08 | 136 |
nongranular leukocyte | 6.28e-08 | 115 |
regulatory T cell | 7.07e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.07e-08 | 2 |
naive regulatory T cell | 7.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.83e-27 | 15 |
haemolymphatic fluid | 1.83e-27 | 15 |
organism substance | 1.83e-27 | 15 |
hemopoietic organ | 3.56e-11 | 7 |
immune organ | 3.56e-11 | 7 |
thymus | 3.53e-08 | 4 |
hemolymphoid system gland | 3.53e-08 | 4 |
thymic region | 3.53e-08 | 4 |
pharyngeal gland | 3.53e-08 | 4 |
thymus primordium | 3.53e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.