FFCP PHASE1:Hg19::chr14:22918614..22918621,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-459bp_to_uc001wdx.3_5end|coexpression_cluster_id=C3410|description=CAGE_peak_7_at_uc001wdx.3_5end|id=chr14:22918614..22918621,+|ontology_enrichment_celltype=CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0000842!1.68e-12!3;CL:0000625!2.73e-12!11;CL:0000791!7.68e-10!18;CL:0000789!7.68e-10!18;CL:0002420!7.68e-10!18;CL:0002419!7.68e-10!18;CL:0000790!7.68e-10!18;CL:0000224!1.75e-09!4;CL:0000838!4.95e-07!52;CL:0000542!7.38e-07!53;CL:0000051!7.38e-07!53;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25|ontology_enrichment_celltype_v019=CL:0000623;4.73e-47;3!CL:0002127;1.41e-16;1!CL:0000911;1.41e-16;1!CL:0000814;1.41e-16;1!CL:0000136;3.56e-11;13|ontology_enrichment_celltype_v019_2=CL:0000623,7.56e-47,3;CL:0000825,7.56e-47,3;CL:0002127,1.21e-16,1;CL:0000914,1.21e-16,1;CL:0000911,1.21e-16,1;CL:0000814,1.21e-16,1;CL:0002042,1.21e-16,1;CL:0002039,1.21e-16,1;CL:0002040,1.21e-16,1;CL:0002041,1.21e-16,1;CL:0000136,9.19e-10,15;CL:0000893,5.49e-09,2;CL:0002489,5.49e-09,2;CL:0000809,5.49e-09,2;CL:0000808,5.49e-09,2;CL:0000894,5.49e-09,2;CL:0000806,5.49e-09,2;CL:0000807,5.49e-09,2;CL:0000805,5.49e-09,2;CL:0002425,5.49e-09,2|ontology_enrichment_development_v019=CL:0002425;5.94e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.93e-20!15;UBERON:0000179!1.93e-20!15;UBERON:0000463!1.93e-20!15;UBERON:0004177!5.78e-13!7;UBERON:0002370!5.91e-09!4;UBERON:0005058!5.91e-09!4;UBERON:0009113!5.91e-09!4;UBERON:0003295!5.91e-09!4;UBERON:0005562!5.91e-09!4;UBERON:0002390!6.19e-07!102;UBERON:0003061!6.19e-07!102|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-16;15!UBERON:0000179;1.16e-16;15!UBERON:0000463;1.16e-16;15!UBERON:0002390;1.75e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-16,15;UBERON:0000179,1.03e-16,15;UBERON:0000463,1.03e-16,15|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,1.53531759238885,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0.301150238155546,0.383959833463255,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,3.15249216323084,3.45004119775228,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,3.82318603571188,0.569647187174163,0.952927101831156,0,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,2.75711019087115,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@uc001wdx.3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-459bp_to_uc001wdx.3_5end | |||
|coexpression_cluster_id=C3410 | |||
|description=CAGE_peak_7_at_uc001wdx.3_5end | |||
|id=chr14:22918614..22918621,+ | |||
|ontology_enrichment_celltype=CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0000842!1.68e-12!3;CL:0000625!2.73e-12!11;CL:0000791!7.68e-10!18;CL:0000789!7.68e-10!18;CL:0002420!7.68e-10!18;CL:0002419!7.68e-10!18;CL:0000790!7.68e-10!18;CL:0000224!1.75e-09!4;CL:0000838!4.95e-07!52;CL:0000542!7.38e-07!53;CL:0000051!7.38e-07!53;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.73e-47;3!CL:0002127;1.41e-16;1!CL:0000911;1.41e-16;1!CL:0000814;1.41e-16;1!CL:0000136;3.56e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.56e-47,3;CL:0000825,7.56e-47,3;CL:0002127,1.21e-16,1;CL:0000914,1.21e-16,1;CL:0000911,1.21e-16,1;CL:0000814,1.21e-16,1;CL:0002042,1.21e-16,1;CL:0002039,1.21e-16,1;CL:0002040,1.21e-16,1;CL:0002041,1.21e-16,1;CL:0000136,9.19e-10,15;CL:0000893,5.49e-09,2;CL:0002489,5.49e-09,2;CL:0000809,5.49e-09,2;CL:0000808,5.49e-09,2;CL:0000894,5.49e-09,2;CL:0000806,5.49e-09,2;CL:0000807,5.49e-09,2;CL:0000805,5.49e-09,2;CL:0002425,5.49e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.94e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.93e-20!15;UBERON:0000179!1.93e-20!15;UBERON:0000463!1.93e-20!15;UBERON:0004177!5.78e-13!7;UBERON:0002370!5.91e-09!4;UBERON:0005058!5.91e-09!4;UBERON:0009113!5.91e-09!4;UBERON:0003295!5.91e-09!4;UBERON:0005562!5.91e-09!4;UBERON:0002390!6.19e-07!102;UBERON:0003061!6.19e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-16;15!UBERON:0000179;1.16e-16;15!UBERON:0000463;1.16e-16;15!UBERON:0002390;1.75e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-16,15;UBERON:0000179,1.03e-16,15;UBERON:0000463,1.03e-16,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,1.53531759238885,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0.301150238155546,0.383959833463255,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,3.15249216323084,3.45004119775228,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,3.82318603571188,0.569647187174163,0.952927101831156,0,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,2.75711019087115,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@uc001wdx.3 | |||
}} |
Revision as of 03:50, 11 September 2013
Short description: | p7@uc001wdx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_uc001wdx.3_5end |
Coexpression cluster: | C3410_NK_Natural_Whole_mature_blood_acute_Basophils |
Association with transcript: | -459bp_to_uc001wdx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.56e-47 | 3 |
pro-NK cell | 7.56e-47 | 3 |
innate effector T cell | 1.21e-16 | 1 |
immature NK T cell | 1.21e-16 | 1 |
effector T cell | 1.21e-16 | 1 |
mature NK T cell | 1.21e-16 | 1 |
immature NK T cell stage IV | 1.21e-16 | 1 |
immature NK T cell stage I | 1.21e-16 | 1 |
immature NK T cell stage II | 1.21e-16 | 1 |
immature NK T cell stage III | 1.21e-16 | 1 |
fat cell | 9.19e-10 | 15 |
thymocyte | 5.49e-09 | 2 |
double negative thymocyte | 5.49e-09 | 2 |
double-positive, alpha-beta thymocyte | 5.49e-09 | 2 |
DN4 thymocyte | 5.49e-09 | 2 |
DN1 thymic pro-T cell | 5.49e-09 | 2 |
DN2 thymocyte | 5.49e-09 | 2 |
DN3 thymocyte | 5.49e-09 | 2 |
immature single positive thymocyte | 5.49e-09 | 2 |
early T lineage precursor | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.03e-16 | 15 |
haemolymphatic fluid | 1.03e-16 | 15 |
organism substance | 1.03e-16 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.