FFCP PHASE1:Hg19::chr15:30010696..30010715,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C52|description=CAGE_peak_at_chr15:30010696..30010715,-|id=chr15:30010696..30010715,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;9.43e-11;3!CL:0000388;9.43e-11;3!CL:0002188;5.86e-07;5|ontology_enrichment_celltype_v019_2=CL:0000135,8.99e-11,3;CL:0000388,8.99e-11,3;CL:0002188,6.04e-07,5|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0003056;9.43e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.85e-14!115;UBERON:0000481!7.24e-10!347;UBERON:0001046!2.90e-09!19;UBERON:0000162!8.68e-09!14;UBERON:0001353!8.68e-09!14;UBERON:0000163!8.68e-09!14;UBERON:0006866!8.68e-09!14;UBERON:0000164!8.68e-09!14;UBERON:0000931!8.68e-09!14;UBERON:0002020!1.21e-08!34;UBERON:0003528!1.21e-08!34;UBERON:0001893!1.97e-08!34;UBERON:0001049!3.71e-08!57;UBERON:0005068!3.71e-08!57;UBERON:0006241!3.71e-08!57;UBERON:0007135!3.71e-08!57;UBERON:0002791!5.44e-08!33;UBERON:0003937!5.45e-08!12;UBERON:0005399!5.45e-08!12;UBERON:0000119!5.63e-08!312;UBERON:0004122!6.19e-08!15;UBERON:0000477!8.64e-08!286;UBERON:0002780!1.00e-07!41;UBERON:0001890!1.00e-07!41;UBERON:0006240!1.00e-07!41;UBERON:0004921!1.19e-07!129;UBERON:0004185!1.19e-07!129;UBERON:0000483!1.25e-07!309;UBERON:0002616!1.55e-07!59;UBERON:0000475!1.66e-07!365;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0003080!2.27e-07!42;UBERON:0001869!2.58e-07!32;UBERON:0004111!2.80e-07!241;UBERON:0002346!3.69e-07!90;UBERON:0002367!4.67e-07!11;UBERON:0010147!4.67e-07!11;UBERON:0009846!4.67e-07!11;UBERON:0003353!4.67e-07!11;UBERON:0004902!4.67e-07!11;UBERON:0003820!4.67e-07!11;UBERON:0009847!4.67e-07!11|ontology_enrichment_uberon_v019=UBERON:0000941;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0003714;1.91e-15;2!UBERON:0005162;1.91e-15;2!UBERON:0000122;1.91e-15;2!UBERON:0007846;9.43e-11;3!UBERON:0000043;9.43e-11;3!UBERON:0007845;9.43e-11;3|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.99e-30,1;UBERON:0001785,9.99e-30,1;UBERON:0002464,9.99e-30,1;UBERON:0004904,9.99e-30,1;UBERON:0001021,9.99e-30,1;UBERON:0003902,9.99e-30,1;UBERON:0005425,9.99e-30,1;UBERON:0003714,1.33e-15,2;UBERON:0005162,1.33e-15,2;UBERON:0000122,1.33e-15,2;UBERON:0007846,8.99e-11,3;UBERON:0000043,8.99e-11,3;UBERON:0007845,8.99e-11,3;UBERON:0001781,1.82e-08,4|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.542530047399471,0.207970861530807,0.892144943985809,0,0.117141414992713,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0.241718899183244,0.200506470303285,0.368323955743585,0.114814448164607,0.546273504020151,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.30347334256665,1.39453664789186,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr15:30010696..30010715,- | |||
|id=chr15:30010696..30010715,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;9.43e-11;3!CL:0000388;9.43e-11;3!CL:0002188;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,8.99e-11,3;CL:0000388,8.99e-11,3;CL:0002188,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0003056;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-14!115;UBERON:0000481!7.24e-10!347;UBERON:0001046!2.90e-09!19;UBERON:0000162!8.68e-09!14;UBERON:0001353!8.68e-09!14;UBERON:0000163!8.68e-09!14;UBERON:0006866!8.68e-09!14;UBERON:0000164!8.68e-09!14;UBERON:0000931!8.68e-09!14;UBERON:0002020!1.21e-08!34;UBERON:0003528!1.21e-08!34;UBERON:0001893!1.97e-08!34;UBERON:0001049!3.71e-08!57;UBERON:0005068!3.71e-08!57;UBERON:0006241!3.71e-08!57;UBERON:0007135!3.71e-08!57;UBERON:0002791!5.44e-08!33;UBERON:0003937!5.45e-08!12;UBERON:0005399!5.45e-08!12;UBERON:0000119!5.63e-08!312;UBERON:0004122!6.19e-08!15;UBERON:0000477!8.64e-08!286;UBERON:0002780!1.00e-07!41;UBERON:0001890!1.00e-07!41;UBERON:0006240!1.00e-07!41;UBERON:0004921!1.19e-07!129;UBERON:0004185!1.19e-07!129;UBERON:0000483!1.25e-07!309;UBERON:0002616!1.55e-07!59;UBERON:0000475!1.66e-07!365;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0003080!2.27e-07!42;UBERON:0001869!2.58e-07!32;UBERON:0004111!2.80e-07!241;UBERON:0002346!3.69e-07!90;UBERON:0002367!4.67e-07!11;UBERON:0010147!4.67e-07!11;UBERON:0009846!4.67e-07!11;UBERON:0003353!4.67e-07!11;UBERON:0004902!4.67e-07!11;UBERON:0003820!4.67e-07!11;UBERON:0009847!4.67e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0003714;1.91e-15;2!UBERON:0005162;1.91e-15;2!UBERON:0000122;1.91e-15;2!UBERON:0007846;9.43e-11;3!UBERON:0000043;9.43e-11;3!UBERON:0007845;9.43e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.99e-30,1;UBERON:0001785,9.99e-30,1;UBERON:0002464,9.99e-30,1;UBERON:0004904,9.99e-30,1;UBERON:0001021,9.99e-30,1;UBERON:0003902,9.99e-30,1;UBERON:0005425,9.99e-30,1;UBERON:0003714,1.33e-15,2;UBERON:0005162,1.33e-15,2;UBERON:0000122,1.33e-15,2;UBERON:0007846,8.99e-11,3;UBERON:0000043,8.99e-11,3;UBERON:0007845,8.99e-11,3;UBERON:0001781,1.82e-08,4 | |||
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| |||
|short_description=p@chr15:30010696..30010715,- | |||
}} |
Revision as of 06:30, 11 September 2013
Short description: | p@chr15:30010696..30010715, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:30010696..30010715, - |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 8.99e-11 | 3 |
tendon cell | 8.99e-11 | 3 |
glomerular endothelial cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.99e-30 | 1 |
cranial nerve | 9.99e-30 | 1 |
nerve trunk | 9.99e-30 | 1 |
nerve connecting eye with brain | 9.99e-30 | 1 |
nerve | 9.99e-30 | 1 |
retinal neural layer | 9.99e-30 | 1 |
presumptive neural retina | 9.99e-30 | 1 |
neural tissue | 1.33e-15 | 2 |
multi cell component structure | 1.33e-15 | 2 |
neuron projection bundle | 1.33e-15 | 2 |
dense regular connective tissue | 8.99e-11 | 3 |
tendon | 8.99e-11 | 3 |
regular connective tissue | 8.99e-11 | 3 |
layer of retina | 1.82e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.