FFCP PHASE1:Hg19::chr15:39884878..39884898,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=N|UniProt=|association_with_transcript=-347bp_to_ENST00000484734_5end|coexpression_cluster_id=C142|description=CAGE_peak_30_at_THBS1_5end|id=chr15:39884878..39884898,+|ontology_enrichment_celltype=CL:0002371!6.53e-13!591;CL:0000057!1.15e-12!75;CL:0000144!4.55e-12!625;CL:0002139!7.81e-12!24;CL:0000055!7.39e-11!180;CL:0000012!1.89e-09!682;CL:0000548!2.04e-09!679;CL:0000004!2.04e-09!679;CL:0000255!2.04e-09!679;CL:0000071!3.13e-08!18;CL:0002546!3.13e-08!18;CL:0000222!3.22e-08!119;CL:0000115!7.64e-08!35;CL:0000063!1.80e-07!578;CL:0000220!4.27e-07!246;CL:0000213!4.85e-07!57;CL:0000215!4.85e-07!57;CL:0002620!6.65e-07!23;CL:0002078!7.47e-07!44;CL:0002321!7.85e-07!248|ontology_enrichment_celltype_v019=CL:0002620;2.69e-10;23!CL:0002580;2.61e-07;3!CL:0002579;5.11e-07;3!CL:0002139;6.04e-07;24|ontology_enrichment_celltype_v019_2=CL:0000057,5.74e-13,76;CL:0002620,2.14e-10,23;CL:0002580,2.54e-07,3;CL:0002579,5.70e-07,3;CL:0002139,6.05e-07,24;CL:0002615,9.78e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.11e-09;5!DOID:450;2.11e-09;5!DOID:66;2.11e-09;5!DOID:423;2.11e-09;5!DOID:0080000;2.11e-09;5!DOID:11722;2.11e-09;5|ontology_enrichment_disease_v019_2=DOID:17,2.05e-09,5;DOID:450,2.05e-09,5;DOID:66,2.05e-09,5;DOID:423,2.05e-09,5;DOID:0080000,2.05e-09,5;DOID:11722,2.05e-09,5|ontology_enrichment_uberon=UBERON:0000055!2.27e-12!69;UBERON:0002049!6.90e-12!79;UBERON:0007798!6.90e-12!79;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004872!1.10e-10!84;UBERON:0003102!2.04e-10!95;UBERON:0001637!1.64e-09!42;UBERON:0003509!1.64e-09!42;UBERON:0004572!1.64e-09!42;UBERON:0002097!8.58e-09!40;UBERON:0000468!1.14e-08!659;UBERON:0002199!1.17e-08!45;UBERON:0002416!1.17e-08!45;UBERON:0000467!1.45e-08!625;UBERON:0000480!1.90e-08!626;UBERON:0001009!2.25e-08!113;UBERON:0001986!3.13e-08!18;UBERON:0004638!3.13e-08!18;UBERON:0004852!3.13e-08!18;UBERON:0004535!3.18e-08!110;UBERON:0000487!1.32e-07!22;UBERON:0006914!1.52e-07!25;UBERON:0003914!6.89e-07!118;UBERON:0000490!7.12e-07!138;UBERON:0004923!9.62e-07!57|ontology_enrichment_uberon_v019=UBERON:0003688;6.12e-12;6!UBERON:0002358;6.12e-12;6!UBERON:0003684;6.12e-12;6!UBERON:0001178;6.12e-12;6!UBERON:0005631;3.74e-08;10!UBERON:0000158;3.74e-08;10!UBERON:0002097;1.12e-07;41!UBERON:0004457;1.27e-07;9!UBERON:0000042;1.27e-07;9!UBERON:0002199;5.66e-07;46!UBERON:0002416;5.66e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.62e-12,6;UBERON:0002358,4.62e-12,6;UBERON:0003684,4.62e-12,6;UBERON:0001178,4.62e-12,6;UBERON:0002097,1.04e-09,41;UBERON:0000055,1.89e-09,68;UBERON:0001637,6.85e-09,42;UBERON:0003509,6.85e-09,42;UBERON:0004572,6.85e-09,42;UBERON:0002199,3.70e-08,46;UBERON:0002416,3.70e-08,46;UBERON:0007500,1.43e-07,59;UBERON:0001981,1.43e-07,59;UBERON:0004537,1.43e-07,59;UBERON:0006965,1.43e-07,59;UBERON:0002049,1.89e-07,78;UBERON:0007798,1.89e-07,78;UBERON:0004923,7.09e-07,66|phase1_expression=6.7221000330106,9.20632252731228,3.38290569830331,12.0087958023756,1.78784437770915,5.23403114460221,0,0,0.261185628199839,0.245733936501509,0,0.873765488520689,0.791300934685361,0.37129905888014,0,1.34465029290355,1.80808358407193,0.730310090387373,1.95173119516203,0.246242116153576,0.408001382488506,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,1.60435557976113,0,0,0,0,0.145398238779565,0,0,0.697287110717054,0.411167888021826,0,1.1507695692886,1.0246428261164,0.236482229888585,1.37898272294647,0.645484683583826,0,0.941211697713023,0,0,0,0.320929027076094,0,0,0,0.426224750532694,5.80418477257168,0,0,0.75374599577023,0,0,3.63239701580021,0,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,2.00535164254356,0.434539556882471,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0,2.82653970962005,0.838998872419812,3.02629846134074,1.04497483268405,0.775250277507987,0.71153252537342,1.67360306382335,2.01414658554573,2.28081631715554,0.488124115096339,0.735326160691737,2.43042584364528,0.982297011124877,0.44905874525234,0.450445921933289,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,10.4364109856017,1.8994576749687,2.1185468930115,0.860509862246441,0.354668382198357,0.560677600142307,0,1.72667283892012,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,8.65434252474949,0,0,0.168336113954066,0,0.277064115484183,0,5.51678032438235,2.40380894250555,0.907457465280168,3.22901344239952,4.05759038755278,3.39091041855299,1.20036438433761,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-347bp_to_ENST00000484734_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_30_at_THBS1_5end | |||
|id=chr15:39884878..39884898,+ | |||
|ontology_enrichment_celltype=CL:0002371!6.53e-13!591;CL:0000057!1.15e-12!75;CL:0000144!4.55e-12!625;CL:0002139!7.81e-12!24;CL:0000055!7.39e-11!180;CL:0000012!1.89e-09!682;CL:0000548!2.04e-09!679;CL:0000004!2.04e-09!679;CL:0000255!2.04e-09!679;CL:0000071!3.13e-08!18;CL:0002546!3.13e-08!18;CL:0000222!3.22e-08!119;CL:0000115!7.64e-08!35;CL:0000063!1.80e-07!578;CL:0000220!4.27e-07!246;CL:0000213!4.85e-07!57;CL:0000215!4.85e-07!57;CL:0002620!6.65e-07!23;CL:0002078!7.47e-07!44;CL:0002321!7.85e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.69e-10;23!CL:0002580;2.61e-07;3!CL:0002579;5.11e-07;3!CL:0002139;6.04e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.74e-13,76;CL:0002620,2.14e-10,23;CL:0002580,2.54e-07,3;CL:0002579,5.70e-07,3;CL:0002139,6.05e-07,24;CL:0002615,9.78e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.11e-09;5!DOID:450;2.11e-09;5!DOID:66;2.11e-09;5!DOID:423;2.11e-09;5!DOID:0080000;2.11e-09;5!DOID:11722;2.11e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.05e-09,5;DOID:450,2.05e-09,5;DOID:66,2.05e-09,5;DOID:423,2.05e-09,5;DOID:0080000,2.05e-09,5;DOID:11722,2.05e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.27e-12!69;UBERON:0002049!6.90e-12!79;UBERON:0007798!6.90e-12!79;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004872!1.10e-10!84;UBERON:0003102!2.04e-10!95;UBERON:0001637!1.64e-09!42;UBERON:0003509!1.64e-09!42;UBERON:0004572!1.64e-09!42;UBERON:0002097!8.58e-09!40;UBERON:0000468!1.14e-08!659;UBERON:0002199!1.17e-08!45;UBERON:0002416!1.17e-08!45;UBERON:0000467!1.45e-08!625;UBERON:0000480!1.90e-08!626;UBERON:0001009!2.25e-08!113;UBERON:0001986!3.13e-08!18;UBERON:0004638!3.13e-08!18;UBERON:0004852!3.13e-08!18;UBERON:0004535!3.18e-08!110;UBERON:0000487!1.32e-07!22;UBERON:0006914!1.52e-07!25;UBERON:0003914!6.89e-07!118;UBERON:0000490!7.12e-07!138;UBERON:0004923!9.62e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.12e-12;6!UBERON:0002358;6.12e-12;6!UBERON:0003684;6.12e-12;6!UBERON:0001178;6.12e-12;6!UBERON:0005631;3.74e-08;10!UBERON:0000158;3.74e-08;10!UBERON:0002097;1.12e-07;41!UBERON:0004457;1.27e-07;9!UBERON:0000042;1.27e-07;9!UBERON:0002199;5.66e-07;46!UBERON:0002416;5.66e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.62e-12,6;UBERON:0002358,4.62e-12,6;UBERON:0003684,4.62e-12,6;UBERON:0001178,4.62e-12,6;UBERON:0002097,1.04e-09,41;UBERON:0000055,1.89e-09,68;UBERON:0001637,6.85e-09,42;UBERON:0003509,6.85e-09,42;UBERON:0004572,6.85e-09,42;UBERON:0002199,3.70e-08,46;UBERON:0002416,3.70e-08,46;UBERON:0007500,1.43e-07,59;UBERON:0001981,1.43e-07,59;UBERON:0004537,1.43e-07,59;UBERON:0006965,1.43e-07,59;UBERON:0002049,1.89e-07,78;UBERON:0007798,1.89e-07,78;UBERON:0004923,7.09e-07,66 | |||
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| |||
|short_description=p30@THBS1 | |||
}} |
Revision as of 06:50, 11 September 2013
Short description: | p30@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -347bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.74e-13 | 76 |
skin fibroblast | 2.14e-10 | 23 |
preadipocyte of the breast | 2.54e-07 | 3 |
omentum preadipocyte | 5.70e-07 | 3 |
endothelial cell of vascular tree | 6.05e-07 | 24 |
adipocyte of omentum tissue | 9.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.62e-12 | 6 |
peritoneum | 4.62e-12 | 6 |
abdominal cavity | 4.62e-12 | 6 |
visceral peritoneum | 4.62e-12 | 6 |
skin of body | 1.04e-09 | 41 |
vessel | 1.89e-09 | 68 |
artery | 6.85e-09 | 42 |
arterial blood vessel | 6.85e-09 | 42 |
arterial system | 6.85e-09 | 42 |
integument | 3.70e-08 | 46 |
integumental system | 3.70e-08 | 46 |
epithelial tube open at both ends | 1.43e-07 | 59 |
blood vessel | 1.43e-07 | 59 |
blood vasculature | 1.43e-07 | 59 |
vascular cord | 1.43e-07 | 59 |
vasculature | 1.89e-07 | 78 |
vascular system | 1.89e-07 | 78 |
organ component layer | 7.09e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.05e-09 | 5 |
myotonic disease | 2.05e-09 | 5 |
muscle tissue disease | 2.05e-09 | 5 |
myopathy | 2.05e-09 | 5 |
muscular disease | 2.05e-09 | 5 |
myotonic dystrophy | 2.05e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.