FFCP PHASE1:Hg19::chr15:42186162..42186197,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15680|TSSclassifier=S|UniProt=Q9NRC6|association_with_transcript=77bp_to_ENST00000320955,NM_016642,uc001zos.2_5end|coexpression_cluster_id=C164|description=CAGE_peak_1_at_SPTBN5_5end|id=chr15:42186162..42186197,-|ontology_enrichment_celltype=CL:0000242!1.91e-12!2;CL:0000312!1.52e-10!5;CL:0000240!7.31e-09!6;CL:0000311!7.31e-09!6;CL:0000079!7.31e-09!6;CL:0000237!7.31e-09!6;CL:0000036!7.31e-09!6;CL:0000357!7.31e-09!6;CL:0000114!7.31e-09!6;CL:0000362!9.46e-07!8|ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3|ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3|ontology_enrichment_development_v019=UBERON:0006241;1.12e-17;3!UBERON:0003057;1.12e-17;3|ontology_enrichment_disease=DOID:3493!4.19e-12!2;DOID:299!1.75e-07!25;DOID:3111!3.32e-07!1;DOID:3603!3.32e-07!1|ontology_enrichment_disease_v019=DOID:3111;3.99e-50;1!DOID:3603;3.99e-50;1!DOID:3493;4.32e-26;2!DOID:4929;5.56e-26;2!DOID:299;1.02e-18;25!DOID:3119;2.95e-15;14|ontology_enrichment_disease_v019_2=DOID:3111,3.99e-50,1;DOID:3603,3.99e-50,1;DOID:3493,4.32e-26,2;DOID:4929,5.56e-26,2;DOID:299,1.02e-18,25;DOID:3119,2.95e-15,14|ontology_enrichment_uberon=UBERON:0001896!3.12e-17!3;UBERON:0005290!3.12e-17!3;UBERON:0010096!3.12e-17!3;UBERON:0003076!5.56e-13!15;UBERON:0003057!5.56e-13!15;UBERON:0004733!1.79e-11!12;UBERON:0002028!1.79e-11!12;UBERON:0007277!1.79e-11!12;UBERON:0002298!2.15e-11!8;UBERON:0004732!1.43e-10!13;UBERON:0004913!3.13e-07!1;UBERON:0003703!3.13e-07!1;UBERON:0001174!3.13e-07!1;UBERON:0004914!3.13e-07!1;UBERON:0002038!3.95e-07!1;UBERON:0009661!3.95e-07!1;UBERON:0000989!5.26e-07!1;UBERON:0008811!5.26e-07!1;UBERON:0006258!5.26e-07!1;UBERON:0005876!5.26e-07!1;UBERON:0004874!5.26e-07!1|ontology_enrichment_uberon_v019=UBERON:0004913;2.42e-50;1!UBERON:0003703;2.42e-50;1!UBERON:0001174;2.42e-50;1!UBERON:0004914;2.42e-50;1!UBERON:0002114;8.00e-18;2!UBERON:0002240;1.12e-17;3!UBERON:0005174;1.12e-17;3!UBERON:0001137;1.12e-17;3!UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0002108;2.94e-11;4!UBERON:0005409;1.02e-09;22!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7!UBERON:0004921;3.37e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.42e-50,1;UBERON:0003703,2.42e-50,1;UBERON:0001174,2.42e-50,1;UBERON:0004914,2.42e-50,1;UBERON:0002114,8.00e-18,2;UBERON:0002240,1.12e-17,3;UBERON:0005174,1.12e-17,3;UBERON:0001137,1.12e-17,3;UBERON:0002108,2.94e-11,4;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0005409,1.03e-08,25;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,14.6243848086712,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.8600374989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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15680 | |||
|TSSclassifier=S | |||
|UniProt=Q9NRC6 | |||
|association_with_transcript=77bp_to_ENST00000320955,NM_016642,uc001zos.2_5end | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_1_at_SPTBN5_5end | |||
|id=chr15:42186162..42186197,- | |||
|ontology_enrichment_celltype=CL:0000242!1.91e-12!2;CL:0000312!1.52e-10!5;CL:0000240!7.31e-09!6;CL:0000311!7.31e-09!6;CL:0000079!7.31e-09!6;CL:0000237!7.31e-09!6;CL:0000036!7.31e-09!6;CL:0000357!7.31e-09!6;CL:0000114!7.31e-09!6;CL:0000362!9.46e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.12e-17;3!UBERON:0003057;1.12e-17;3 | |||
|ontology_enrichment_disease=DOID:3493!4.19e-12!2;DOID:299!1.75e-07!25;DOID:3111!3.32e-07!1;DOID:3603!3.32e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.99e-50;1!DOID:3603;3.99e-50;1!DOID:3493;4.32e-26;2!DOID:4929;5.56e-26;2!DOID:299;1.02e-18;25!DOID:3119;2.95e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.99e-50,1;DOID:3603,3.99e-50,1;DOID:3493,4.32e-26,2;DOID:4929,5.56e-26,2;DOID:299,1.02e-18,25;DOID:3119,2.95e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.12e-17!3;UBERON:0005290!3.12e-17!3;UBERON:0010096!3.12e-17!3;UBERON:0003076!5.56e-13!15;UBERON:0003057!5.56e-13!15;UBERON:0004733!1.79e-11!12;UBERON:0002028!1.79e-11!12;UBERON:0007277!1.79e-11!12;UBERON:0002298!2.15e-11!8;UBERON:0004732!1.43e-10!13;UBERON:0004913!3.13e-07!1;UBERON:0003703!3.13e-07!1;UBERON:0001174!3.13e-07!1;UBERON:0004914!3.13e-07!1;UBERON:0002038!3.95e-07!1;UBERON:0009661!3.95e-07!1;UBERON:0000989!5.26e-07!1;UBERON:0008811!5.26e-07!1;UBERON:0006258!5.26e-07!1;UBERON:0005876!5.26e-07!1;UBERON:0004874!5.26e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.42e-50;1!UBERON:0003703;2.42e-50;1!UBERON:0001174;2.42e-50;1!UBERON:0004914;2.42e-50;1!UBERON:0002114;8.00e-18;2!UBERON:0002240;1.12e-17;3!UBERON:0005174;1.12e-17;3!UBERON:0001137;1.12e-17;3!UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0002108;2.94e-11;4!UBERON:0005409;1.02e-09;22!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7!UBERON:0004921;3.37e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.42e-50,1;UBERON:0003703,2.42e-50,1;UBERON:0001174,2.42e-50,1;UBERON:0004914,2.42e-50,1;UBERON:0002114,8.00e-18,2;UBERON:0002240,1.12e-17,3;UBERON:0005174,1.12e-17,3;UBERON:0001137,1.12e-17,3;UBERON:0002108,2.94e-11,4;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0005409,1.03e-08,25;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,14.6243848086712,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@SPTBN5 | |||
}} |
Revision as of 06:59, 11 September 2013
Short description: | p1@SPTBN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SPTBN5_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 77bp_to_ENST00000320955, NM_016642, uc001zos.2_5end |
EntrezGene: | SPTBN5 |
HGNC: | 15680 |
UniProt: | Q9NRC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.42e-50 | 1 |
extrahepatic bile duct | 2.42e-50 | 1 |
common bile duct | 2.42e-50 | 1 |
duodenal papilla | 2.42e-50 | 1 |
duodenum | 8.00e-18 | 2 |
spinal cord | 1.12e-17 | 3 |
dorsal region element | 1.12e-17 | 3 |
dorsum | 1.12e-17 | 3 |
small intestine | 2.94e-11 | 4 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
gastrointestinal system | 1.03e-08 | 25 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.99e-50 | 1 |
mucinous cystadenocarcinoma | 3.99e-50 | 1 |
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
tubular adenocarcinoma | 5.56e-26 | 2 |
adenocarcinoma | 1.02e-18 | 25 |
gastrointestinal system cancer | 2.95e-15 | 14 |
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