FFCP PHASE1:Hg19::chr16:1823455..1823488,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16618|TSSclassifier=W|UniProt=P82930|association_with_transcript=-299bp_to_ENST00000397375_5end|coexpression_cluster_id=C19|description=CAGE_peak_4_at_MRPS34_5end|id=chr16:1823455..1823488,-|ontology_enrichment_celltype=CL:0000066!6.20e-17!254|ontology_enrichment_celltype_v019=CL:0000039;2.90e-08;7!CL:0000586;2.90e-08;7|ontology_enrichment_celltype_v019_2=CL:0000039,1.56e-08,7;CL:0000586,1.56e-08,7|ontology_enrichment_development_v019=UBERON:0001041;1.86e-11;30!UBERON:0009497;2.71e-11;13!UBERON:0003104;3.80e-11;31!UBERON:0004161;7.03e-09;11|ontology_enrichment_disease=DOID:305!2.71e-34!106;DOID:162!5.10e-32!235;DOID:14566!1.49e-31!239;DOID:0050687!2.94e-28!143;DOID:0050686!1.22e-10!137;DOID:1749!9.14e-07!14|ontology_enrichment_disease_v019=DOID:1799;3.29e-07;1!DOID:10165;3.29e-07;1!DOID:1798;3.29e-07;1!DOID:1749;7.05e-07;14|ontology_enrichment_disease_v019_2=DOID:305,2.49e-12,106;DOID:0050687,1.75e-09,143;DOID:1799,1.85e-07,1;DOID:10165,1.85e-07,1;DOID:1798,1.85e-07,1;DOID:1749,9.69e-07,14|ontology_enrichment_uberon=UBERON:0004119!3.67e-08!169;UBERON:0000925!3.67e-08!169;UBERON:0006595!3.67e-08!169;UBERON:0004921!4.02e-08!129;UBERON:0004185!4.02e-08!129;UBERON:0000077!5.25e-08!130;UBERON:0001007!5.25e-07!155;UBERON:0001555!5.25e-07!155;UBERON:0007026!5.25e-07!155;UBERON:0001041!7.52e-07!98|ontology_enrichment_uberon_v019=UBERON:0002423;4.99e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.83e-10,101;UBERON:0009497,6.06e-08,25;UBERON:0000015,6.06e-08,25;UBERON:0002423,6.06e-08,25;UBERON:0006235,6.06e-08,25;UBERON:0004161,6.06e-08,25;UBERON:0005172,1.83e-07,54;UBERON:0005173,1.83e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0.309868802321207,0.568676929949686,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.975789649036763,1.85541675650079,0.69716365721711,0.932949495138334,0.252320850875628,0.72995471815166,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.200506470303285,0.920809889358963,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.768760269460425,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.320472213382419,3.84991942105343,0.980160863924127,0,0.432807638929335,0.497992903438899,0.637705090915289,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,1.4098700508785,0.935702702041099,0,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0.988823245360557,1.26675244876796,0,0.276283915531148,0.503865495708552,0.511343412510774,0.738508832766417,0,0.179736702294654,1.25314822272926,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.762760950878299,0,0,0,0.694499979733169,0,0,0,0.331737779793674,0,0.219385397153973,0.4357538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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16618 | |||
|TSSclassifier=W | |||
|UniProt=P82930 | |||
|association_with_transcript=-299bp_to_ENST00000397375_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_4_at_MRPS34_5end | |||
|id=chr16:1823455..1823488,- | |||
|ontology_enrichment_celltype=CL:0000066!6.20e-17!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.90e-08;7!CL:0000586;2.90e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.56e-08,7;CL:0000586,1.56e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.86e-11;30!UBERON:0009497;2.71e-11;13!UBERON:0003104;3.80e-11;31!UBERON:0004161;7.03e-09;11 | |||
|ontology_enrichment_disease=DOID:305!2.71e-34!106;DOID:162!5.10e-32!235;DOID:14566!1.49e-31!239;DOID:0050687!2.94e-28!143;DOID:0050686!1.22e-10!137;DOID:1749!9.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.29e-07;1!DOID:10165;3.29e-07;1!DOID:1798;3.29e-07;1!DOID:1749;7.05e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.49e-12,106;DOID:0050687,1.75e-09,143;DOID:1799,1.85e-07,1;DOID:10165,1.85e-07,1;DOID:1798,1.85e-07,1;DOID:1749,9.69e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.67e-08!169;UBERON:0000925!3.67e-08!169;UBERON:0006595!3.67e-08!169;UBERON:0004921!4.02e-08!129;UBERON:0004185!4.02e-08!129;UBERON:0000077!5.25e-08!130;UBERON:0001007!5.25e-07!155;UBERON:0001555!5.25e-07!155;UBERON:0007026!5.25e-07!155;UBERON:0001041!7.52e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.99e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.83e-10,101;UBERON:0009497,6.06e-08,25;UBERON:0000015,6.06e-08,25;UBERON:0002423,6.06e-08,25;UBERON:0006235,6.06e-08,25;UBERON:0004161,6.06e-08,25;UBERON:0005172,1.83e-07,54;UBERON:0005173,1.83e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0.309868802321207,0.568676929949686,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.975789649036763,1.85541675650079,0.69716365721711,0.932949495138334,0.252320850875628,0.72995471815166,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.200506470303285,0.920809889358963,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.768760269460425,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.320472213382419,3.84991942105343,0.980160863924127,0,0.432807638929335,0.497992903438899,0.637705090915289,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,1.4098700508785,0.935702702041099,0,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0.988823245360557,1.26675244876796,0,0.276283915531148,0.503865495708552,0.511343412510774,0.738508832766417,0,0.179736702294654,1.25314822272926,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.762760950878299,0,0,0,0.694499979733169,0,0,0,0.331737779793674,0,0.219385397153973,0.435753854075961,0.41827123283581,0,0.227884111694002,0.69169171316418,0.179515288819544,2.06430006651815,0,0,0,0,0,0,0.451191321234361,0.588187602953219,0.503464760927528,0,0,0.421996129056054,0,1.13082457147153,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0.782658475728359,0,0,0,0,0,18.6401040073971,1.03688191397247,0,0.992975867626496,1.2557316736289,1.19472429772959,1.13843818411917,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.51595809741485,0.483781656445426,0.65780385377567,0.492692742319255,0,0,0,0,0.19871461170299,0,1.17330829640882,0,0,0.19980960958213,0.864542502924636,0.343609788497747,0.686379991447858,0.576219191952599,0.124252535565433,0.942776138467182,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,3.49487848582361,1.10296455230113,0.741742725430498,1.3480708770837,0.492137407573744,0.169346664131569,0,0,1.44677833618517,0.687697182986169,1.24632101408756,0,0.77380195455795,0,0.335434687599266,0.236417121897595,0.157363764404994,0.211200673038813,0.35857467866569,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0.226624183040251,0,1.32506888912221,0,0,0.342173675768659,0,0,0,0,0,0.988058159489721,0.121792598380896,0.638341257770182,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0.499921631848426,0.151649117541648,0,0.941063278792687,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,4.95889154733902,0,0,0.489473409012935,0,0,0.219284049578707,0,1.15748422962549,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0.19998739585493,0,0,0,0,0.419638523158333,0,0.639471856518258,0.107824811396682,0.314531883711793,0.109209638192014,0.1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| |||
|short_description=p4@MRPS34 | |||
}} |
Revision as of 09:29, 11 September 2013
Short description: | p4@MRPS34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MRPS34_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -299bp_to_ENST00000397375_5end |
EntrezGene: | MRPS34 |
HGNC: | 16618 |
UniProt: | P82930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.56e-08 | 7 |
germ cell | 1.56e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.83e-10 | 101 |
epithelium of foregut-midgut junction | 6.06e-08 | 25 |
anatomical boundary | 6.06e-08 | 25 |
hepatobiliary system | 6.06e-08 | 25 |
foregut-midgut junction | 6.06e-08 | 25 |
septum transversum | 6.06e-08 | 25 |
abdomen element | 1.83e-07 | 54 |
abdominal segment element | 1.83e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.49e-12 | 106 |
cell type cancer | 1.75e-09 | 143 |
islet cell tumor | 1.85e-07 | 1 |
endocrine pancreas cancer | 1.85e-07 | 1 |
pancreatic endocrine carcinoma | 1.85e-07 | 1 |
squamous cell carcinoma | 9.69e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.