FFCP PHASE1:Hg19::chr17:32690239..32690259,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10609|TSSclassifier=N|UniProt=P22362|association_with_transcript=0bp_to_NM_002981,uc002hid.1_5end|coexpression_cluster_id=C17|description=CAGE_peak_1_at_CCL1_5end|id=chr17:32690239..32690259,-|ontology_enrichment_celltype=CL:0000557!5.10e-35!71;CL:0000763!4.02e-33!112;CL:0000049!4.02e-33!112;CL:0002032!1.81e-32!165;CL:0000837!1.81e-32!165;CL:0000988!5.41e-32!182;CL:0000839!3.01e-31!70;CL:0002031!1.21e-30!124;CL:0000037!1.82e-30!172;CL:0000566!1.82e-30!172;CL:0002009!2.93e-30!65;CL:0000738!3.70e-28!140;CL:0000766!6.01e-28!76;CL:0002194!3.37e-27!63;CL:0000576!3.37e-27!63;CL:0000040!3.37e-27!63;CL:0000559!3.37e-27!63;CL:0002057!5.69e-25!42;CL:0002087!3.38e-23!119;CL:0000860!8.23e-23!45;CL:0000990!8.31e-11!8;CL:0000034!1.28e-10!444;CL:0000048!6.49e-10!430;CL:0000134!1.26e-09!358;CL:0000723!1.58e-09!436;CL:0002320!3.86e-09!365;CL:0000840!5.25e-09!5;CL:0001029!5.25e-09!5;CL:0000451!1.26e-08!10;CL:0000219!2.37e-08!390;CL:0002274!1.43e-07!5;CL:0000457!1.43e-07!5;CL:0002191!1.43e-07!5;CL:0000097!1.43e-07!5;CL:0000831!1.43e-07!5;CL:0002028!1.43e-07!5;CL:0000453!2.40e-07!5|ontology_enrichment_celltype_v019=CL:0000473;1.79e-15;39!CL:0000234;1.79e-15;39!CL:0000860;2.16e-13;33!CL:0002057;2.16e-13;33!CL:0001014;1.58e-10;2!CL:0001016;1.58e-10;2!CL:0000453;6.24e-09;5!CL:0000990;2.48e-08;8!CL:0000763;8.04e-08;100!CL:0000235;1.40e-07;6!CL:0000840;1.64e-07;5!CL:0002138;3.56e-07;6!CL:0000738;4.96e-07;136!CL:0000451;7.96e-07;10|ontology_enrichment_celltype_v019_2=CL:0000763,4.97e-25,108;CL:0000049,4.97e-25,108;CL:0000988,1.71e-21,177;CL:0002032,7.07e-21,161;CL:0000837,7.07e-21,161;CL:0000557,3.30e-20,67;CL:0000037,1.01e-19,168;CL:0002009,1.47e-17,61;CL:0000839,4.62e-16,66;CL:0000473,9.04e-16,48;CL:0000234,9.04e-16,48;CL:0002031,5.44e-15,120;CL:0000766,2.01e-14,72;CL:0000738,6.03e-14,136;CL:0002194,7.43e-14,59;CL:0000576,7.43e-14,59;CL:0000040,7.43e-14,59;CL:0000559,7.43e-14,59;CL:0000860,4.22e-11,42;CL:0002057,4.22e-11,42;CL:0001014,1.51e-10,2;CL:0001016,1.51e-10,2;CL:0002087,5.47e-10,115;CL:0000453,6.51e-09,5;CL:0000990,3.02e-08,8;CL:0000235,1.45e-07,6;CL:0000840,1.94e-07,5;CL:0001029,1.94e-07,5;CL:0005020,2.96e-07,6;CL:0002138,2.96e-07,6;CL:0005022,2.96e-07,6;CL:0000048,4.09e-07,427;CL:0000723,6.58e-07,433;CL:0000451,9.32e-07,10|ontology_enrichment_development_v019=CL:0002057;1.15e-08;42!CL:0000049;2.64e-07;108!CL:0005022;3.56e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,1.57e-07,51;DOID:0060083,1.57e-07,51|ontology_enrichment_uberon=UBERON:0002193!3.55e-31!112;UBERON:0002390!3.54e-30!102;UBERON:0003061!3.54e-30!102;UBERON:0002371!8.08e-30!80;UBERON:0001474!5.84e-27!86;UBERON:0002405!2.85e-25!115;UBERON:0004765!2.56e-21!101;UBERON:0001434!2.56e-21!101;UBERON:0003081!7.40e-16!216;UBERON:0002204!1.87e-13!167;UBERON:0002384!1.77e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-20,108;UBERON:0002405,1.52e-20,93;UBERON:0002390,1.59e-17,98;UBERON:0003061,1.59e-17,98;UBERON:0002371,2.50e-17,76;UBERON:0001474,9.32e-16,82;UBERON:0004765,5.48e-14,90;UBERON:0001434,3.56e-12,100;UBERON:0003081,2.07e-08,203;UBERON:0002204,2.46e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0.764134057479513,1.47781061009902,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.28769239232215,0.768482119587302,4.25668013799453,0.344745680736619,0.645484683583826,4.06279459783025,0.188242339542605,0.272906150057846,0.674170453335254,0.612167784741805,0.962787081228281,3.83602275479425,0,0.797854630486527,0,1.16083695451434,1.70215567407342,6.22822248995575,0.75374599577023,1.0429658368404,1.52032191293582,1.81619850790011,4.78760926783834,13.2914202725171,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31550323682941,0.552700035571697,1.15921234294021,0,0,0,1.13309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.0447784237956,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,1.85194205030644,1.52203321787679,0,0,0.984868024349589,38.8447080131135,3.86441021950693,0,0,0,0,0,0,33513.9094211094,17.2574930665923,0.621984346622316,0,0.75745460055828,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10609 | |||
|TSSclassifier=N | |||
|UniProt=P22362 | |||
|association_with_transcript=0bp_to_NM_002981,uc002hid.1_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_CCL1_5end | |||
|id=chr17:32690239..32690259,- | |||
|ontology_enrichment_celltype=CL:0000557!5.10e-35!71;CL:0000763!4.02e-33!112;CL:0000049!4.02e-33!112;CL:0002032!1.81e-32!165;CL:0000837!1.81e-32!165;CL:0000988!5.41e-32!182;CL:0000839!3.01e-31!70;CL:0002031!1.21e-30!124;CL:0000037!1.82e-30!172;CL:0000566!1.82e-30!172;CL:0002009!2.93e-30!65;CL:0000738!3.70e-28!140;CL:0000766!6.01e-28!76;CL:0002194!3.37e-27!63;CL:0000576!3.37e-27!63;CL:0000040!3.37e-27!63;CL:0000559!3.37e-27!63;CL:0002057!5.69e-25!42;CL:0002087!3.38e-23!119;CL:0000860!8.23e-23!45;CL:0000990!8.31e-11!8;CL:0000034!1.28e-10!444;CL:0000048!6.49e-10!430;CL:0000134!1.26e-09!358;CL:0000723!1.58e-09!436;CL:0002320!3.86e-09!365;CL:0000840!5.25e-09!5;CL:0001029!5.25e-09!5;CL:0000451!1.26e-08!10;CL:0000219!2.37e-08!390;CL:0002274!1.43e-07!5;CL:0000457!1.43e-07!5;CL:0002191!1.43e-07!5;CL:0000097!1.43e-07!5;CL:0000831!1.43e-07!5;CL:0002028!1.43e-07!5;CL:0000453!2.40e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-15;39!CL:0000234;1.79e-15;39!CL:0000860;2.16e-13;33!CL:0002057;2.16e-13;33!CL:0001014;1.58e-10;2!CL:0001016;1.58e-10;2!CL:0000453;6.24e-09;5!CL:0000990;2.48e-08;8!CL:0000763;8.04e-08;100!CL:0000235;1.40e-07;6!CL:0000840;1.64e-07;5!CL:0002138;3.56e-07;6!CL:0000738;4.96e-07;136!CL:0000451;7.96e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.97e-25,108;CL:0000049,4.97e-25,108;CL:0000988,1.71e-21,177;CL:0002032,7.07e-21,161;CL:0000837,7.07e-21,161;CL:0000557,3.30e-20,67;CL:0000037,1.01e-19,168;CL:0002009,1.47e-17,61;CL:0000839,4.62e-16,66;CL:0000473,9.04e-16,48;CL:0000234,9.04e-16,48;CL:0002031,5.44e-15,120;CL:0000766,2.01e-14,72;CL:0000738,6.03e-14,136;CL:0002194,7.43e-14,59;CL:0000576,7.43e-14,59;CL:0000040,7.43e-14,59;CL:0000559,7.43e-14,59;CL:0000860,4.22e-11,42;CL:0002057,4.22e-11,42;CL:0001014,1.51e-10,2;CL:0001016,1.51e-10,2;CL:0002087,5.47e-10,115;CL:0000453,6.51e-09,5;CL:0000990,3.02e-08,8;CL:0000235,1.45e-07,6;CL:0000840,1.94e-07,5;CL:0001029,1.94e-07,5;CL:0005020,2.96e-07,6;CL:0002138,2.96e-07,6;CL:0005022,2.96e-07,6;CL:0000048,4.09e-07,427;CL:0000723,6.58e-07,433;CL:0000451,9.32e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-08;42!CL:0000049;2.64e-07;108!CL:0005022;3.56e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.57e-07,51;DOID:0060083,1.57e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.55e-31!112;UBERON:0002390!3.54e-30!102;UBERON:0003061!3.54e-30!102;UBERON:0002371!8.08e-30!80;UBERON:0001474!5.84e-27!86;UBERON:0002405!2.85e-25!115;UBERON:0004765!2.56e-21!101;UBERON:0001434!2.56e-21!101;UBERON:0003081!7.40e-16!216;UBERON:0002204!1.87e-13!167;UBERON:0002384!1.77e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-20,108;UBERON:0002405,1.52e-20,93;UBERON:0002390,1.59e-17,98;UBERON:0003061,1.59e-17,98;UBERON:0002371,2.50e-17,76;UBERON:0001474,9.32e-16,82;UBERON:0004765,5.48e-14,90;UBERON:0001434,3.56e-12,100;UBERON:0003081,2.07e-08,203;UBERON:0002204,2.46e-07,167 | |||
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|short_description=p1@CCL1 | |||
}} |
Revision as of 13:02, 11 September 2013
Short description: | p1@CCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCL1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_NM_002981, uc002hid.1_5end |
EntrezGene: | CCL1 |
HGNC: | 10609 |
UniProt: | P22362 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-20 | 108 |
immune system | 1.52e-20 | 93 |
hematopoietic system | 1.59e-17 | 98 |
blood island | 1.59e-17 | 98 |
bone marrow | 2.50e-17 | 76 |
bone element | 9.32e-16 | 82 |
skeletal element | 5.48e-14 | 90 |
skeletal system | 3.56e-12 | 100 |
lateral plate mesoderm | 2.07e-08 | 203 |
musculoskeletal system | 2.46e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.57e-07 | 51 |
immune system cancer | 1.57e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.