FFCP PHASE1:Hg19::chr17:76473890..76473895,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C156|description=CAGE_peak_at_chr17:76473890..76473895,+|id=chr17:76473890..76473895,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000946;1.46e-50;1!CL:0000786;1.46e-50;1|ontology_enrichment_celltype_v019_2=CL:0000946,1.46e-50,1;CL:0000786,1.46e-50,1;CL:0000980,1.46e-50,1;CL:0000785,4.32e-26,2;CL:0000955,4.32e-26,2;CL:0000818,4.32e-26,2;CL:0000954,4.32e-26,2;CL:0000816,4.32e-26,2;CL:0000817,6.76e-18,3|ontology_enrichment_development_v019=CL:0000954;4.32e-26;2!UBERON:0004872;2.18e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000200!2.53e-11!6;UBERON:0001017!1.90e-10!82;UBERON:0001893!7.28e-10!34;UBERON:0005743!8.46e-10!86;UBERON:0002780!9.62e-10!41;UBERON:0001890!9.62e-10!41;UBERON:0006240!9.62e-10!41;UBERON:0003080!1.82e-09!42;UBERON:0001870!2.53e-09!2;UBERON:0001049!2.67e-09!57;UBERON:0005068!2.67e-09!57;UBERON:0006241!2.67e-09!57;UBERON:0007135!2.67e-09!57;UBERON:0001950!1.01e-08!20;UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86;UBERON:0001869!1.67e-08!32;UBERON:0000955!2.10e-08!69;UBERON:0006238!2.10e-08!69;UBERON:0002791!2.54e-08!33;UBERON:0002346!5.44e-08!90;UBERON:0002619!7.03e-08!22;UBERON:0007023!1.50e-07!115;UBERON:0002616!1.90e-07!59;UBERON:0003056!4.27e-07!61;UBERON:0000956!7.33e-07!25;UBERON:0000203!7.33e-07!25|ontology_enrichment_uberon_v019=UBERON:0001897;7.14e-26;2!UBERON:0002702;7.14e-26;2!UBERON:0010225;7.14e-26;2!UBERON:0002106;9.45e-18;3!UBERON:0001870;9.45e-18;3!UBERON:0002784;1.13e-13;4!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5!UBERON:0000200;1.44e-09;6!UBERON:0001894;2.18e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0002702,5.56e-26,2;UBERON:0001897,7.14e-26,2;UBERON:0010225,7.14e-26,2;UBERON:0001870,8.00e-18,3;UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0002784,1.13e-13,4;UBERON:0000200,1.32e-09,6;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0,0,0,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91403925334675,0,0,0.328863867814245,0,0,0,0.314231179832004,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,1.19929387109915,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0.12669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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_at_chr17:76473890..76473895,+ | |||
|id=chr17:76473890..76473895,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.46e-50;1!CL:0000786;1.46e-50;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.46e-50,1;CL:0000786,1.46e-50,1;CL:0000980,1.46e-50,1;CL:0000785,4.32e-26,2;CL:0000955,4.32e-26,2;CL:0000818,4.32e-26,2;CL:0000954,4.32e-26,2;CL:0000816,4.32e-26,2;CL:0000817,6.76e-18,3 | |||
|ontology_enrichment_development_v019=CL:0000954;4.32e-26;2!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!2.53e-11!6;UBERON:0001017!1.90e-10!82;UBERON:0001893!7.28e-10!34;UBERON:0005743!8.46e-10!86;UBERON:0002780!9.62e-10!41;UBERON:0001890!9.62e-10!41;UBERON:0006240!9.62e-10!41;UBERON:0003080!1.82e-09!42;UBERON:0001870!2.53e-09!2;UBERON:0001049!2.67e-09!57;UBERON:0005068!2.67e-09!57;UBERON:0006241!2.67e-09!57;UBERON:0007135!2.67e-09!57;UBERON:0001950!1.01e-08!20;UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86;UBERON:0001869!1.67e-08!32;UBERON:0000955!2.10e-08!69;UBERON:0006238!2.10e-08!69;UBERON:0002791!2.54e-08!33;UBERON:0002346!5.44e-08!90;UBERON:0002619!7.03e-08!22;UBERON:0007023!1.50e-07!115;UBERON:0002616!1.90e-07!59;UBERON:0003056!4.27e-07!61;UBERON:0000956!7.33e-07!25;UBERON:0000203!7.33e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;7.14e-26;2!UBERON:0002702;7.14e-26;2!UBERON:0010225;7.14e-26;2!UBERON:0002106;9.45e-18;3!UBERON:0001870;9.45e-18;3!UBERON:0002784;1.13e-13;4!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5!UBERON:0000200;1.44e-09;6!UBERON:0001894;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,5.56e-26,2;UBERON:0001897,7.14e-26,2;UBERON:0010225,7.14e-26,2;UBERON:0001870,8.00e-18,3;UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0002784,1.13e-13,4;UBERON:0000200,1.32e-09,6;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
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|short_description=p@chr17:76473890..76473895,+ | |||
}} |
Revision as of 16:06, 11 September 2013
Short description: | p@chr17:76473890..76473895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76473890..76473895, + |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.46e-50 | 1 |
plasma cell | 1.46e-50 | 1 |
plasmablast | 1.46e-50 | 1 |
mature B cell | 4.32e-26 | 2 |
pre-B-II cell | 4.32e-26 | 2 |
transitional stage B cell | 4.32e-26 | 2 |
small pre-B-II cell | 4.32e-26 | 2 |
immature B cell | 4.32e-26 | 2 |
precursor B cell | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 5.56e-26 | 2 |
dorsal plus ventral thalamus | 7.14e-26 | 2 |
thalamic complex | 7.14e-26 | 2 |
frontal cortex | 8.00e-18 | 3 |
spleen | 1.12e-17 | 3 |
gastrointestinal system mesentery | 1.12e-17 | 3 |
stomach region | 1.12e-17 | 3 |
mesentery | 1.12e-17 | 3 |
gastrointestinal system serosa | 1.12e-17 | 3 |
mesentery of stomach | 1.12e-17 | 3 |
gut mesentery | 1.12e-17 | 3 |
dorsal mesentery | 1.12e-17 | 3 |
dorsal mesogastrium | 1.12e-17 | 3 |
peritoneal cavity | 1.12e-17 | 3 |
spleen primordium | 1.12e-17 | 3 |
regional part of diencephalon | 1.13e-13 | 4 |
gyrus | 1.32e-09 | 6 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.