FFCP PHASE1:Hg19::chr19:47922373..47922384,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56917|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29537|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000559524_5end|description=CAGE_peak_5_at_MEIS3_5end|id=chr19:47922373..47922384,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2!CL:0000333;1.40e-14;5|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10|ontology_enrichment_uberon=UBERON:0002619!9.68e-13!22;UBERON:0001950!4.37e-12!20;UBERON:0001893!2.13e-11!34;UBERON:0001869!6.06e-11!32;UBERON:0000956!7.25e-11!25;UBERON:0000203!7.25e-11!25;UBERON:0002791!3.47e-10!33;UBERON:0007023!2.32e-09!115;UBERON:0000200!5.69e-09!6;UBERON:0002780!8.76e-09!41;UBERON:0001890!8.76e-09!41;UBERON:0006240!8.76e-09!41;UBERON:0003056!9.41e-09!61;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0003080!1.75e-08!42;UBERON:0005743!2.88e-08!86;UBERON:0000033!3.43e-08!123;UBERON:0001017!3.84e-08!82;UBERON:0000153!3.99e-08!129;UBERON:0007811!3.99e-08!129;UBERON:0000955!7.37e-08!69;UBERON:0006238!7.37e-08!69;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002771!5.41e-07!3;UBERON:0002346!7.42e-07!90;UBERON:0001049!8.05e-07!57;UBERON:0005068!8.05e-07!57;UBERON:0006241!8.05e-07!57;UBERON:0007135!8.05e-07!57|ontology_enrichment_uberon_v019=UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0001016,1.68e-07,89|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.389748020644795,0.757301322732344,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.850493793212345,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47997066212368,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0,0.642292250964595,0,0,0.615349092722265,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.675375846183947,0,0,0.507326481551255,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.460409414939944,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0.470317296361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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29537 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559524_5end | |||
|description=CAGE_peak_5_at_MEIS3_5end | |||
|id=chr19:47922373..47922384,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2!CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002619!9.68e-13!22;UBERON:0001950!4.37e-12!20;UBERON:0001893!2.13e-11!34;UBERON:0001869!6.06e-11!32;UBERON:0000956!7.25e-11!25;UBERON:0000203!7.25e-11!25;UBERON:0002791!3.47e-10!33;UBERON:0007023!2.32e-09!115;UBERON:0000200!5.69e-09!6;UBERON:0002780!8.76e-09!41;UBERON:0001890!8.76e-09!41;UBERON:0006240!8.76e-09!41;UBERON:0003056!9.41e-09!61;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0003080!1.75e-08!42;UBERON:0005743!2.88e-08!86;UBERON:0000033!3.43e-08!123;UBERON:0001017!3.84e-08!82;UBERON:0000153!3.99e-08!129;UBERON:0007811!3.99e-08!129;UBERON:0000955!7.37e-08!69;UBERON:0006238!7.37e-08!69;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002771!5.41e-07!3;UBERON:0002346!7.42e-07!90;UBERON:0001049!8.05e-07!57;UBERON:0005068!8.05e-07!57;UBERON:0006241!8.05e-07!57;UBERON:0007135!8.05e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.389748020644795,0.757301322732344,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.850493793212345,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47997066212368,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0,0.642292250964595,0,0,0.615349092722265,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.675375846183947,0,0,0.507326481551255,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.460409414939944,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0.730336388246517,0,0,0.315543124386369,0.679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.18378979906969,0,0,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0.733448665097199,0.813792356631477,0,0,0 | |||
|short_description=p5@MEIS3 | |||
}} |
Revision as of 21:31, 11 September 2013
Short description: | p5@MEIS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MEIS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000559524_5end |
EntrezGene: | MEIS3 |
HGNC: | 29537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.