FFCP PHASE1:Hg19::chr1:156095033..156095048,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C512|description=CAGE_peak_at_chr1:156095033..156095048,-|id=chr1:156095033..156095048,-|ontology_enrichment_celltype=CL:0000860!3.38e-24!45;CL:0002057!8.26e-23!42;CL:0000557!2.16e-16!71;CL:0000839!1.40e-15!70;CL:0000766!5.87e-15!76;CL:0000738!3.16e-14!140;CL:0002009!4.21e-14!65;CL:0002031!1.31e-13!124;CL:0002194!6.73e-13!63;CL:0000576!6.73e-13!63;CL:0000040!6.73e-13!63;CL:0000559!6.73e-13!63;CL:0000763!1.44e-11!112;CL:0000049!1.44e-11!112;CL:0000037!1.47e-11!172;CL:0000566!1.47e-11!172;CL:0002087!3.83e-11!119;CL:0002032!1.27e-10!165;CL:0000837!1.27e-10!165;CL:0000988!2.26e-10!182;CL:0000063!2.44e-10!578;CL:0000134!5.16e-08!358;CL:0002320!7.13e-08!365|ontology_enrichment_celltype_v019=CL:0000860;3.70e-37;33!CL:0002057;3.70e-37;33!CL:0000576;1.82e-27;48!CL:0000473;2.75e-26;39!CL:0000234;2.75e-26;39!CL:0000766;1.05e-20;69!CL:0002393;3.18e-13;6!CL:0002397;3.18e-13;6!CL:0002087;9.53e-11;104!CL:0000738;3.77e-09;136!CL:0000623;2.81e-08;3!CL:0000767;2.84e-08;3!CL:0000763;3.47e-08;100|ontology_enrichment_celltype_v019_2=CL:0000860,7.45e-52,42;CL:0002057,7.45e-52,42;CL:0000473,4.73e-44,48;CL:0000234,4.73e-44,48;CL:0000557,1.08e-39,67;CL:0000738,7.03e-39,136;CL:0000766,1.44e-38,72;CL:0002009,1.41e-36,61;CL:0000839,1.51e-35,66;CL:0002031,4.73e-35,120;CL:0002194,3.68e-33,59;CL:0000576,3.68e-33,59;CL:0000040,3.68e-33,59;CL:0000559,3.68e-33,59;CL:0002087,3.04e-31,115;CL:0000037,1.85e-28,168;CL:0002032,1.57e-26,161;CL:0000837,1.57e-26,161;CL:0000988,3.24e-26,177;CL:0000763,5.61e-25,108;CL:0000049,5.61e-25,108;CL:0000134,3.66e-13,354;CL:0002320,1.43e-12,361;CL:0000219,2.57e-12,386;CL:0002393,2.57e-11,9;CL:0002397,2.57e-11,9;CL:0000048,1.46e-09,427;CL:0000723,3.43e-09,433;CL:0000034,1.03e-08,441;CL:0000767,2.65e-08,3;CL:0000623,2.65e-08,3;CL:0000825,2.65e-08,3|ontology_enrichment_development_v019=CL:0002057;1.35e-38;42!CL:0000049;3.21e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.23e-13!86;UBERON:0004765!1.33e-13!101;UBERON:0001434!1.33e-13!101;UBERON:0002371!1.36e-13!80;UBERON:0002390!8.03e-12!102;UBERON:0003061!8.03e-12!102;UBERON:0002193!7.79e-11!112;UBERON:0002405!8.84e-08!115;UBERON:0002384!2.69e-07!375;UBERON:0002204!6.72e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-35,76;UBERON:0001474,4.59e-32,82;UBERON:0002390,1.86e-31,98;UBERON:0003061,1.86e-31,98;UBERON:0002405,2.49e-30,93;UBERON:0004765,3.35e-28,90;UBERON:0002193,2.16e-27,108;UBERON:0001434,2.99e-24,100;UBERON:0003081,3.48e-15,203;UBERON:0002204,1.68e-12,167;UBERON:0002384,9.04e-12,371;UBERON:0000926,1.00e-07,315;UBERON:0004120,1.00e-07,315;UBERON:0006603,1.00e-07,315|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.527533956456907,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.57470412614962,0.314843125254717,6.68719270643137,6.52509976765262,3.71558695958582,0,0.30120591877825,0,0,0,0.293600439334847,1.10799081706375,1.00272223735071,3.03815219002193,0,0,0.257575567634187,2.03557534291391,1.88937971844405,1.94067248950253,1.85943229524548,2.05583944010913,2.16794459626573,0.575384784644301,2.0492856522328,4.02019790810595,1.37898272294647,1.29096936716765,8.12558919566051,2.25890807451126,1.36453075028923,4.04502272001152,1.83650335422542,1.28371610830437,1.91801137739712,1.64925650093358,2.99195486432448,5.11469700639233,1.16083695451434,0,0.622822248995575,1.7587406567972,2.08593167368081,5.42972111762792,0,1.10483290796269,1.89877432464531,3.80259515361495,2.55125159958052,3.14487968262564,1.90958672949042,0.300353785683013,0.32145117339416,3.13514018115373,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,2.75393678159366,1.17903228824749,3.49522548299166,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0.294605907474837,1.77227115666897,1.89562704635511,0.128091319725675,0.130059347559878,0,0,0,1.4828656316206,0.267540828089713,0,0,2.29932296161153,2.06176467289578,1.01207876807801,0,0,0,0,0,0,0,0,3.83052812126992,4.81392352410313,4.48955652036677,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0.370784442784429,0,0,0,0,1.14398982156026,0,0.79504962946682,0,0,0,0.419499436209906,0,0.626984899610432,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0,0.367663080345869,0,0.535798369704479,0,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0.408308342509787,0,0.516628905878827,0,0.494533858557114,0,0.718618141816238,0,0,0,0.877955241761676,0.612975591598039,0.3004761178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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C512 | |||
|description=CAGE_peak_at_chr1:156095033..156095048,- | |||
|id=chr1:156095033..156095048,- | |||
|ontology_enrichment_celltype=CL:0000860!3.38e-24!45;CL:0002057!8.26e-23!42;CL:0000557!2.16e-16!71;CL:0000839!1.40e-15!70;CL:0000766!5.87e-15!76;CL:0000738!3.16e-14!140;CL:0002009!4.21e-14!65;CL:0002031!1.31e-13!124;CL:0002194!6.73e-13!63;CL:0000576!6.73e-13!63;CL:0000040!6.73e-13!63;CL:0000559!6.73e-13!63;CL:0000763!1.44e-11!112;CL:0000049!1.44e-11!112;CL:0000037!1.47e-11!172;CL:0000566!1.47e-11!172;CL:0002087!3.83e-11!119;CL:0002032!1.27e-10!165;CL:0000837!1.27e-10!165;CL:0000988!2.26e-10!182;CL:0000063!2.44e-10!578;CL:0000134!5.16e-08!358;CL:0002320!7.13e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-37;33!CL:0002057;3.70e-37;33!CL:0000576;1.82e-27;48!CL:0000473;2.75e-26;39!CL:0000234;2.75e-26;39!CL:0000766;1.05e-20;69!CL:0002393;3.18e-13;6!CL:0002397;3.18e-13;6!CL:0002087;9.53e-11;104!CL:0000738;3.77e-09;136!CL:0000623;2.81e-08;3!CL:0000767;2.84e-08;3!CL:0000763;3.47e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.45e-52,42;CL:0002057,7.45e-52,42;CL:0000473,4.73e-44,48;CL:0000234,4.73e-44,48;CL:0000557,1.08e-39,67;CL:0000738,7.03e-39,136;CL:0000766,1.44e-38,72;CL:0002009,1.41e-36,61;CL:0000839,1.51e-35,66;CL:0002031,4.73e-35,120;CL:0002194,3.68e-33,59;CL:0000576,3.68e-33,59;CL:0000040,3.68e-33,59;CL:0000559,3.68e-33,59;CL:0002087,3.04e-31,115;CL:0000037,1.85e-28,168;CL:0002032,1.57e-26,161;CL:0000837,1.57e-26,161;CL:0000988,3.24e-26,177;CL:0000763,5.61e-25,108;CL:0000049,5.61e-25,108;CL:0000134,3.66e-13,354;CL:0002320,1.43e-12,361;CL:0000219,2.57e-12,386;CL:0002393,2.57e-11,9;CL:0002397,2.57e-11,9;CL:0000048,1.46e-09,427;CL:0000723,3.43e-09,433;CL:0000034,1.03e-08,441;CL:0000767,2.65e-08,3;CL:0000623,2.65e-08,3;CL:0000825,2.65e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-38;42!CL:0000049;3.21e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.23e-13!86;UBERON:0004765!1.33e-13!101;UBERON:0001434!1.33e-13!101;UBERON:0002371!1.36e-13!80;UBERON:0002390!8.03e-12!102;UBERON:0003061!8.03e-12!102;UBERON:0002193!7.79e-11!112;UBERON:0002405!8.84e-08!115;UBERON:0002384!2.69e-07!375;UBERON:0002204!6.72e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-35,76;UBERON:0001474,4.59e-32,82;UBERON:0002390,1.86e-31,98;UBERON:0003061,1.86e-31,98;UBERON:0002405,2.49e-30,93;UBERON:0004765,3.35e-28,90;UBERON:0002193,2.16e-27,108;UBERON:0001434,2.99e-24,100;UBERON:0003081,3.48e-15,203;UBERON:0002204,1.68e-12,167;UBERON:0002384,9.04e-12,371;UBERON:0000926,1.00e-07,315;UBERON:0004120,1.00e-07,315;UBERON:0006603,1.00e-07,315 | |||
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| |||
|short_description=p@chr1:156095033..156095048,- | |||
}} |
Revision as of 00:50, 12 September 2013
Short description: | p@chr1:156095033..156095048, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156095033..156095048, - |
Coexpression cluster: | C512_Mast_immature_Basophils_CD14_CD34_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.69e-35 | 76 |
bone element | 4.59e-32 | 82 |
hematopoietic system | 1.86e-31 | 98 |
blood island | 1.86e-31 | 98 |
immune system | 2.49e-30 | 93 |
skeletal element | 3.35e-28 | 90 |
hemolymphoid system | 2.16e-27 | 108 |
skeletal system | 2.99e-24 | 100 |
lateral plate mesoderm | 3.48e-15 | 203 |
musculoskeletal system | 1.68e-12 | 167 |
connective tissue | 9.04e-12 | 371 |
mesoderm | 1.00e-07 | 315 |
mesoderm-derived structure | 1.00e-07 | 315 |
presumptive mesoderm | 1.00e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.