FFCP PHASE1:Hg19::chr1:156593951..156593983,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60484|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17410|TSSclassifier=S|UniProt=|association_with_transcript=95bp_to_ENST00000494218_5end|description=CAGE_peak_6_at_HAPLN2_5end|id=chr1:156593951..156593983,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0006241;2.59e-12;3!UBERON:0003056;2.59e-12;3!UBERON:0003057;2.59e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.03e-75!115;UBERON:0001049!2.26e-44!57;UBERON:0005068!2.26e-44!57;UBERON:0006241!2.26e-44!57;UBERON:0007135!2.26e-44!57;UBERON:0002616!1.31e-39!59;UBERON:0002780!2.01e-35!41;UBERON:0001890!2.01e-35!41;UBERON:0006240!2.01e-35!41;UBERON:0003080!2.00e-34!42;UBERON:0000955!2.28e-34!69;UBERON:0006238!2.28e-34!69;UBERON:0002020!3.51e-34!34;UBERON:0003528!3.51e-34!34;UBERON:0001893!2.55e-33!34;UBERON:0002791!1.43e-31!33;UBERON:0001017!1.44e-31!82;UBERON:0005743!1.55e-31!86;UBERON:0003075!5.27e-30!86;UBERON:0007284!5.27e-30!86;UBERON:0000073!1.29e-29!94;UBERON:0001016!1.29e-29!94;UBERON:0001869!2.70e-29!32;UBERON:0002346!3.06e-28!90;UBERON:0003056!1.77e-23!61;UBERON:0002619!1.97e-22!22;UBERON:0000956!2.18e-19!25;UBERON:0000203!2.18e-19!25;UBERON:0001950!2.84e-18!20;UBERON:0002308!6.48e-18!9;UBERON:0000125!6.48e-18!9;UBERON:0000033!6.92e-18!123;UBERON:0002420!1.93e-17!9;UBERON:0007245!1.93e-17!9;UBERON:0010009!1.93e-17!9;UBERON:0010011!1.93e-17!9;UBERON:0000454!1.93e-17!9;UBERON:0000153!1.26e-16!129;UBERON:0007811!1.26e-16!129;UBERON:0004121!3.43e-13!169;UBERON:0000349!3.53e-13!5;UBERON:0009663!7.00e-13!7;UBERON:0004732!8.79e-13!13;UBERON:0000924!1.15e-12!173;UBERON:0006601!1.15e-12!173;UBERON:0002298!2.30e-12!8;UBERON:0003076!7.34e-11!15;UBERON:0003057!7.34e-11!15;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0000025!1.90e-10!194;UBERON:0000064!5.63e-10!219;UBERON:0000477!1.05e-09!286;UBERON:0006331!1.51e-09!3;UBERON:0000988!3.10e-09!3;UBERON:0006947!3.27e-09!3;UBERON:0004054!3.27e-09!3;UBERON:0004111!3.32e-09!241;UBERON:0001871!2.43e-08!7;UBERON:0000062!5.15e-08!511;UBERON:0002680!1.14e-07!9;UBERON:0001895!1.14e-07!9;UBERON:0010092!1.14e-07!9;UBERON:0000200!3.65e-07!6;UBERON:0005904!5.54e-07!4;UBERON:0002148!6.68e-07!2;UBERON:0009662!6.68e-07!2;UBERON:0001897!8.59e-07!2|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0001897;9.07e-18;2!UBERON:0002148;9.07e-18;2!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0006331;9.07e-18;2!UBERON:0009662;9.07e-18;2!UBERON:0010225;9.07e-18;2!UBERON:0000988;2.59e-12;3!UBERON:0002240;2.59e-12;3!UBERON:0005174;2.59e-12;3!UBERON:0001137;2.59e-12;3!UBERON:0004732;3.75e-11;13!UBERON:0002784;1.44e-09;4!UBERON:0002298;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0002148,6.48e-18,2;UBERON:0006331,6.48e-18,2;UBERON:0009662,6.48e-18,2;UBERON:0001897,7.67e-18,2;UBERON:0010225,7.67e-18,2;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0000988,2.07e-12,3;UBERON:0002240,2.89e-12,3;UBERON:0005174,2.89e-12,3;UBERON:0001137,2.89e-12,3;UBERON:0004732,3.38e-11,13;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0002784,1.32e-09,4;UBERON:0001781,1.44e-09,4;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82;UBERON:0002298,7.58e-07,6;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60484 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17410 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=95bp_to_ENST00000494218_5end | |||
|description=CAGE_peak_6_at_HAPLN2_5end | |||
|id=chr1:156593951..156593983,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0006241;2.59e-12;3!UBERON:0003056;2.59e-12;3!UBERON:0003057;2.59e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.03e-75!115;UBERON:0001049!2.26e-44!57;UBERON:0005068!2.26e-44!57;UBERON:0006241!2.26e-44!57;UBERON:0007135!2.26e-44!57;UBERON:0002616!1.31e-39!59;UBERON:0002780!2.01e-35!41;UBERON:0001890!2.01e-35!41;UBERON:0006240!2.01e-35!41;UBERON:0003080!2.00e-34!42;UBERON:0000955!2.28e-34!69;UBERON:0006238!2.28e-34!69;UBERON:0002020!3.51e-34!34;UBERON:0003528!3.51e-34!34;UBERON:0001893!2.55e-33!34;UBERON:0002791!1.43e-31!33;UBERON:0001017!1.44e-31!82;UBERON:0005743!1.55e-31!86;UBERON:0003075!5.27e-30!86;UBERON:0007284!5.27e-30!86;UBERON:0000073!1.29e-29!94;UBERON:0001016!1.29e-29!94;UBERON:0001869!2.70e-29!32;UBERON:0002346!3.06e-28!90;UBERON:0003056!1.77e-23!61;UBERON:0002619!1.97e-22!22;UBERON:0000956!2.18e-19!25;UBERON:0000203!2.18e-19!25;UBERON:0001950!2.84e-18!20;UBERON:0002308!6.48e-18!9;UBERON:0000125!6.48e-18!9;UBERON:0000033!6.92e-18!123;UBERON:0002420!1.93e-17!9;UBERON:0007245!1.93e-17!9;UBERON:0010009!1.93e-17!9;UBERON:0010011!1.93e-17!9;UBERON:0000454!1.93e-17!9;UBERON:0000153!1.26e-16!129;UBERON:0007811!1.26e-16!129;UBERON:0004121!3.43e-13!169;UBERON:0000349!3.53e-13!5;UBERON:0009663!7.00e-13!7;UBERON:0004732!8.79e-13!13;UBERON:0000924!1.15e-12!173;UBERON:0006601!1.15e-12!173;UBERON:0002298!2.30e-12!8;UBERON:0003076!7.34e-11!15;UBERON:0003057!7.34e-11!15;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0000025!1.90e-10!194;UBERON:0000064!5.63e-10!219;UBERON:0000477!1.05e-09!286;UBERON:0006331!1.51e-09!3;UBERON:0000988!3.10e-09!3;UBERON:0006947!3.27e-09!3;UBERON:0004054!3.27e-09!3;UBERON:0004111!3.32e-09!241;UBERON:0001871!2.43e-08!7;UBERON:0000062!5.15e-08!511;UBERON:0002680!1.14e-07!9;UBERON:0001895!1.14e-07!9;UBERON:0010092!1.14e-07!9;UBERON:0000200!3.65e-07!6;UBERON:0005904!5.54e-07!4;UBERON:0002148!6.68e-07!2;UBERON:0009662!6.68e-07!2;UBERON:0001897!8.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0001897;9.07e-18;2!UBERON:0002148;9.07e-18;2!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0006331;9.07e-18;2!UBERON:0009662;9.07e-18;2!UBERON:0010225;9.07e-18;2!UBERON:0000988;2.59e-12;3!UBERON:0002240;2.59e-12;3!UBERON:0005174;2.59e-12;3!UBERON:0001137;2.59e-12;3!UBERON:0004732;3.75e-11;13!UBERON:0002784;1.44e-09;4!UBERON:0002298;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0002148,6.48e-18,2;UBERON:0006331,6.48e-18,2;UBERON:0009662,6.48e-18,2;UBERON:0001897,7.67e-18,2;UBERON:0010225,7.67e-18,2;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0000988,2.07e-12,3;UBERON:0002240,2.89e-12,3;UBERON:0005174,2.89e-12,3;UBERON:0001137,2.89e-12,3;UBERON:0004732,3.38e-11,13;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0002784,1.32e-09,4;UBERON:0001781,1.44e-09,4;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82;UBERON:0002298,7.58e-07,6;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p6@HAPLN2 | |||
}} |
Revision as of 00:55, 12 September 2013
Short description: | p6@HAPLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HAPLN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 95bp_to_ENST00000494218_5end |
EntrezGene: | HAPLN2 |
HGNC: | 17410 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
locus ceruleus | 6.48e-18 | 2 |
brainstem nucleus | 6.48e-18 | 2 |
hindbrain nucleus | 6.48e-18 | 2 |
dorsal plus ventral thalamus | 7.67e-18 | 2 |
thalamic complex | 7.67e-18 | 2 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
pons | 2.07e-12 | 3 |
spinal cord | 2.89e-12 | 3 |
dorsal region element | 2.89e-12 | 3 |
dorsum | 2.89e-12 | 3 |
segmental subdivision of nervous system | 3.38e-11 | 13 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
regional part of diencephalon | 1.32e-09 | 4 |
layer of retina | 1.44e-09 | 4 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |
brainstem | 7.58e-07 | 6 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.