FFCP PHASE1:Hg19::chr1:183212642..183212654,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1169|description=CAGE_peak_at_chr1:183212642..183212654,+|id=chr1:183212642..183212654,+|ontology_enrichment_celltype=CL:0002076!2.35e-21!43;CL:0000066!1.27e-20!254;CL:0002159!2.74e-17!13;CL:0000223!2.06e-14!59;CL:0002368!1.16e-13!13;CL:0002621!3.09e-12!3;CL:0000240!3.51e-10!6;CL:0000311!3.51e-10!6;CL:0000079!3.51e-10!6;CL:0000237!3.51e-10!6;CL:0000036!3.51e-10!6;CL:0000357!3.51e-10!6;CL:0000114!3.51e-10!6;CL:0000244!8.83e-10!4;CL:0000731!8.83e-10!4;CL:0000575!2.17e-08!2;CL:0002536!4.35e-08!2;CL:1000415!8.89e-08!2;CL:0000362!1.48e-07!8;CL:0002077!1.58e-07!33;CL:0000312!3.71e-07!5;CL:0000220!6.13e-07!246;CL:0002321!7.90e-07!248|ontology_enrichment_celltype_v019=CL:0000244;1.79e-41;4!CL:0000731;1.79e-41;4!CL:0002368;1.72e-22;13!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0002076;5.34e-13;42!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0002328;2.71e-07;3!CL:0002166;2.71e-07;3!CL:0002231;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000244,1.27e-41,4;CL:0000731,1.27e-41,4;CL:0002368,1.50e-22,13;CL:0002336,5.62e-19,1;CL:0002261,5.62e-19,1;CL:0002170,5.62e-19,1;CL:0002076,2.97e-15,42;CL:0000240,7.78e-13,6;CL:0000311,7.78e-13,6;CL:0000079,7.78e-13,6;CL:0000237,7.78e-13,6;CL:0000036,7.78e-13,6;CL:0000357,7.78e-13,6;CL:0000114,7.78e-13,6;CL:0000223,5.15e-11,58;CL:0000066,6.20e-08,253;CL:0002166,2.47e-07,3;CL:0002328,2.97e-07,3;CL:0002231,3.16e-07,3|ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6!CL:0000223;3.44e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!3.09e-12!3;UBERON:0000305!2.21e-08!7;UBERON:0000365!6.84e-08!5;UBERON:0004871!2.45e-07!8;UBERON:0004119!9.40e-07!169;UBERON:0000925!9.40e-07!169;UBERON:0006595!9.40e-07!169|ontology_enrichment_uberon_v019=UBERON:0000365;2.35e-33;5!UBERON:0005910;6.18e-28;6!UBERON:0000486;2.46e-14;12!UBERON:0004815;2.71e-07;3!UBERON:0002031;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.79e-33,5;UBERON:0005910,4.92e-28,6;UBERON:0004119,1.69e-08,160;UBERON:0000925,1.69e-08,160;UBERON:0006595,1.69e-08,160;UBERON:0004815,2.97e-07,3;UBERON:0002031,2.97e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.603173834469785,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.992425680696705,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,1.10497186723076,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.32227932288782,2.88285101047659,0.638063562472921,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,3.36942951335251,1.7737206141467,7.12142540641574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3528948717156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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1169 | |||
|description=CAGE_peak_at_chr1:183212642..183212654,+ | |||
|id=chr1:183212642..183212654,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.35e-21!43;CL:0000066!1.27e-20!254;CL:0002159!2.74e-17!13;CL:0000223!2.06e-14!59;CL:0002368!1.16e-13!13;CL:0002621!3.09e-12!3;CL:0000240!3.51e-10!6;CL:0000311!3.51e-10!6;CL:0000079!3.51e-10!6;CL:0000237!3.51e-10!6;CL:0000036!3.51e-10!6;CL:0000357!3.51e-10!6;CL:0000114!3.51e-10!6;CL:0000244!8.83e-10!4;CL:0000731!8.83e-10!4;CL:0000575!2.17e-08!2;CL:0002536!4.35e-08!2;CL:1000415!8.89e-08!2;CL:0000362!1.48e-07!8;CL:0002077!1.58e-07!33;CL:0000312!3.71e-07!5;CL:0000220!6.13e-07!246;CL:0002321!7.90e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.79e-41;4!CL:0000731;1.79e-41;4!CL:0002368;1.72e-22;13!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0002076;5.34e-13;42!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0002328;2.71e-07;3!CL:0002166;2.71e-07;3!CL:0002231;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.27e-41,4;CL:0000731,1.27e-41,4;CL:0002368,1.50e-22,13;CL:0002336,5.62e-19,1;CL:0002261,5.62e-19,1;CL:0002170,5.62e-19,1;CL:0002076,2.97e-15,42;CL:0000240,7.78e-13,6;CL:0000311,7.78e-13,6;CL:0000079,7.78e-13,6;CL:0000237,7.78e-13,6;CL:0000036,7.78e-13,6;CL:0000357,7.78e-13,6;CL:0000114,7.78e-13,6;CL:0000223,5.15e-11,58;CL:0000066,6.20e-08,253;CL:0002166,2.47e-07,3;CL:0002328,2.97e-07,3;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6!CL:0000223;3.44e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!3.09e-12!3;UBERON:0000305!2.21e-08!7;UBERON:0000365!6.84e-08!5;UBERON:0004871!2.45e-07!8;UBERON:0004119!9.40e-07!169;UBERON:0000925!9.40e-07!169;UBERON:0006595!9.40e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.35e-33;5!UBERON:0005910;6.18e-28;6!UBERON:0000486;2.46e-14;12!UBERON:0004815;2.71e-07;3!UBERON:0002031;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.79e-33,5;UBERON:0005910,4.92e-28,6;UBERON:0004119,1.69e-08,160;UBERON:0000925,1.69e-08,160;UBERON:0006595,1.69e-08,160;UBERON:0004815,2.97e-07,3;UBERON:0002031,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.603173834469785,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.992425680696705,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,1.10497186723076,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.32227932288782,2.88285101047659,0.638063562472921,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,3.36942951335251,1.7737206141467,7.12142540641574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:183212642..183212654,+ | |||
}} |
Revision as of 02:11, 12 September 2013
Short description: | p@chr1:183212642..183212654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183212642..183212654, + |
Coexpression cluster: | C1169_Urothelial_meningioma_medulloblastoma_Prostate_fibrosarcoma_Anulus_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.27e-41 | 4 |
urothelial cell | 1.27e-41 | 4 |
respiratory epithelial cell | 1.50e-22 | 13 |
buccal mucosa cell | 5.62e-19 | 1 |
endothelial cell of viscerocranial mucosa | 5.62e-19 | 1 |
keratinized cell of the oral mucosa | 5.62e-19 | 1 |
endo-epithelial cell | 2.97e-15 | 42 |
stratified squamous epithelial cell | 7.78e-13 | 6 |
keratin accumulating cell | 7.78e-13 | 6 |
stratified epithelial cell | 7.78e-13 | 6 |
keratinizing barrier epithelial cell | 7.78e-13 | 6 |
epithelial fate stem cell | 7.78e-13 | 6 |
stratified epithelial stem cell | 7.78e-13 | 6 |
surface ectodermal cell | 7.78e-13 | 6 |
endodermal cell | 5.15e-11 | 58 |
epithelial cell | 6.20e-08 | 253 |
epithelial cell of Malassez | 2.47e-07 | 3 |
bronchial epithelial cell | 2.97e-07 | 3 |
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.79e-33 | 5 |
transitional epithelium | 4.92e-28 | 6 |
endoderm-derived structure | 1.69e-08 | 160 |
endoderm | 1.69e-08 | 160 |
presumptive endoderm | 1.69e-08 | 160 |
lower respiratory tract epithelium | 2.97e-07 | 3 |
epithelium of bronchus | 2.97e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.