FFCP PHASE1:Hg19::chr1:207083199..207083262,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14315|TSSclassifier=S|UniProt=|association_with_transcript=27bp_to_ENST00000474041_5end|coexpression_cluster_id=C88|description=CAGE_peak_3_at_FAIM3_5end|id=chr1:207083199..207083262,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000148;9.86e-09;10!CL:0000150;9.47e-08;9!CL:0000622;3.85e-07;5|ontology_enrichment_celltype_v019_2=CL:0000148,1.00e-08,10;CL:0000541,1.00e-08,10;CL:0000150,3.50e-08,9;CL:0000622,1.06e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.37e-09!169;UBERON:0000925!2.37e-09!169;UBERON:0006595!2.37e-09!169;UBERON:0001007!2.63e-09!155;UBERON:0001555!2.63e-09!155;UBERON:0007026!2.63e-09!155;UBERON:0001004!3.24e-09!72;UBERON:0007023!7.11e-08!115;UBERON:0001737!2.51e-07!9;UBERON:0001557!6.52e-07!19;UBERON:0003102!7.08e-07!95|ontology_enrichment_uberon_v019=UBERON:0001737;6.52e-13;9!UBERON:0001557;6.52e-13;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.83e-13,9;UBERON:0001007,1.22e-10,145;UBERON:0001555,1.22e-10,145;UBERON:0007026,1.22e-10,145;UBERON:0004119,1.31e-09,160;UBERON:0000925,1.31e-09,160;UBERON:0006595,1.31e-09,160;UBERON:0001004,9.19e-08,74;UBERON:0001557,9.80e-08,19;UBERON:0004921,1.13e-07,118;UBERON:0001041,5.52e-07,87|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,2.09340350391728,0,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0,0.125542639594803,0,0.246301768349837,0.472264687882075,0,0,0,1.83884244895785,0.90361775633475,0.739508020333575,0.0774672005803016,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0.464858073811369,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0,0,1.13477044938228,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,3.4485146397269,0.661044872784862,0,1.1384259382189,0,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0,0.334372990781356,0,0.946895611469467,0,0.334231370655521,1.47302953737419,0.664601683750863,0.812411591295047,0.640456598628376,0.260118695119756,0,0,0,0.741432815810302,0.802622484269139,1.04535523804977,0.113309342697566,0.766440987203842,0,0,0,0.651083453856419,0,0.451725357233318,0,0,0,0,0.201606743224732,0,0.724122019413995,0,0,0,0,0,0.434539556882471,0,1.45990461090791,0,0,0,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,1.55605517699883,0.134710672069688,0.817309515567294,0,0,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0,0,0.61246251376468,0.61417158655884,2.06651562351531,15.4440371446667,4.94533858557114,0,0,0,0,1.38532057742091,0,0.919463387397059,4.95785594391769,0.226864366320042,0,0.213557388818567,0.423863802319124,0,0.618315175430633,0.257640540045629,1.48893485065272,0,1.36411807225678,0.757301322732344,0.552299391853796,0.323292113637624,0,0.302256294682921,1.18692414617341,0.966304265816484,0.272746120590835,2.00763216772303,0,0,0,0,0,0,0,1.28648187638577,0,1.85747171212792,2.16563844500876,4.25904480143438,1.85443159085912,1.68707720918437,2.64705534557745,1.96091499683166,3.32178866755535,4.04493924480493,2.94332197688019,3.8474715694639,0,0,0.8231480226628,0,0,3.9313088667105,2.36315962672562,0,0,0,0.658501712451753,1.1240175325762,1.40740561376283,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,1.97028749946266,0.871901815541886,0.766765358330422,0,0,0,0,0,16.8269419874248,51.5684374503675,28.1321873304113,23.9501424431787,44.3186493551324,18.320926528479,34.2991719156694,0,0,0,0,7.15312891703765,0,1.86156681609409,2.08014873822732,0,1.41849132023278,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,1.07436577943937,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0.300946099727719,0,7.24311499047534,0,0.368738337083406,1.30325421702124,0.195801157462741,0,0.206768026122887,0,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,1.01289087829486,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,1.95018073810956,0,0,0.154048617114644,0.307007349452259,0,0.322260734604821,0.725083469571143,0.0852266274161009,0,0.661139661443912,1.34533047155574,0,1.11273558941105,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENST00000474041_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_3_at_FAIM3_5end | |||
|id=chr1:207083199..207083262,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.86e-09;10!CL:0000150;9.47e-08;9!CL:0000622;3.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.00e-08,10;CL:0000541,1.00e-08,10;CL:0000150,3.50e-08,9;CL:0000622,1.06e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-09!169;UBERON:0000925!2.37e-09!169;UBERON:0006595!2.37e-09!169;UBERON:0001007!2.63e-09!155;UBERON:0001555!2.63e-09!155;UBERON:0007026!2.63e-09!155;UBERON:0001004!3.24e-09!72;UBERON:0007023!7.11e-08!115;UBERON:0001737!2.51e-07!9;UBERON:0001557!6.52e-07!19;UBERON:0003102!7.08e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.52e-13;9!UBERON:0001557;6.52e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.83e-13,9;UBERON:0001007,1.22e-10,145;UBERON:0001555,1.22e-10,145;UBERON:0007026,1.22e-10,145;UBERON:0004119,1.31e-09,160;UBERON:0000925,1.31e-09,160;UBERON:0006595,1.31e-09,160;UBERON:0001004,9.19e-08,74;UBERON:0001557,9.80e-08,19;UBERON:0004921,1.13e-07,118;UBERON:0001041,5.52e-07,87 | |||
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| |||
|short_description=p3@FAIM3 | |||
}} |
Revision as of 03:11, 12 September 2013
Short description: | p3@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAIM3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 27bp_to_ENST00000474041_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.00e-08 | 10 |
melanoblast | 1.00e-08 | 10 |
glandular epithelial cell | 3.50e-08 | 9 |
acinar cell | 1.06e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.83e-13 | 9 |
digestive system | 1.22e-10 | 145 |
digestive tract | 1.22e-10 | 145 |
primitive gut | 1.22e-10 | 145 |
endoderm-derived structure | 1.31e-09 | 160 |
endoderm | 1.31e-09 | 160 |
presumptive endoderm | 1.31e-09 | 160 |
respiratory system | 9.19e-08 | 74 |
upper respiratory tract | 9.80e-08 | 19 |
subdivision of digestive tract | 1.13e-07 | 118 |
foregut | 5.52e-07 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.