FFCP PHASE1:Hg19::chr1:27952741..27952753,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2268|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3697|TSSclassifier=S|UniProt=P09769|association_with_transcript=0bp_to_ENST00000399173,ENST00000468038,NM_001042747,uc001bok.2_5end|description=CAGE_peak_8_at_FGR_5end|id=chr1:27952741..27952753,-|ontology_enrichment_celltype=CL:0000738!2.91e-80!140;CL:0002087!2.38e-77!119;CL:0000037!3.66e-69!172;CL:0000566!3.66e-69!172;CL:0002031!2.39e-65!124;CL:0000988!1.14e-63!182;CL:0002032!3.01e-63!165;CL:0000837!3.01e-63!165;CL:0002057!6.44e-53!42;CL:0000860!2.16e-48!45;CL:0000766!6.52e-43!76;CL:0002194!3.93e-38!63;CL:0000576!3.93e-38!63;CL:0000040!3.93e-38!63;CL:0000559!3.93e-38!63;CL:0002009!1.70e-36!65;CL:0000557!9.15e-34!71;CL:0000839!8.06e-33!70;CL:0000542!2.00e-32!53;CL:0000051!2.00e-32!53;CL:0000838!1.31e-31!52;CL:0000763!1.93e-29!112;CL:0000049!1.93e-29!112;CL:0000945!8.31e-23!24;CL:0000826!8.31e-23!24;CL:0000134!9.22e-18!358;CL:0002320!6.94e-17!365;CL:0000236!7.83e-15!14;CL:0000625!1.14e-14!11;CL:0000219!7.85e-14!390;CL:0000094!1.09e-10!8;CL:0000048!2.79e-10!430;CL:0000723!8.66e-10!436;CL:0000034!1.34e-09!444;CL:0000791!2.16e-09!18;CL:0000789!2.16e-09!18;CL:0002420!2.16e-09!18;CL:0002419!2.16e-09!18;CL:0000790!2.16e-09!18;CL:0002393!8.49e-09!9;CL:0002397!8.49e-09!9;CL:0000084!2.21e-08!25;CL:0000827!2.21e-08!25;CL:0000081!2.61e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.10e-57;33!CL:0002057;1.10e-57;33!CL:0000473;1.74e-39;39!CL:0000234;1.74e-39;39!CL:0000576;1.27e-37;48!CL:0002087;2.43e-30;104!CL:0000945;4.73e-29;24!CL:0000766;3.36e-25;69!CL:0000542;9.03e-23;53!CL:0000625;1.32e-19;11!CL:0000738;1.96e-19;136!CL:0000236;9.68e-16;13!CL:0000094;3.16e-14;8!CL:0000791;4.44e-13;18!CL:0000789;4.44e-13;18!CL:0002419;4.44e-13;18!CL:0000763;1.36e-12;100!CL:0000988;2.45e-12;177!CL:0002393;5.53e-11;6!CL:0002397;5.53e-11;6!CL:0000084;1.55e-10;25!CL:0000081;5.83e-10;11!CL:0000219;1.09e-08;193!CL:0000623;3.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,7.83e-96,136;CL:0002087,1.93e-94,115;CL:0002031,5.62e-82,120;CL:0000037,1.47e-77,168;CL:0002032,2.65e-75,161;CL:0000837,2.65e-75,161;CL:0000988,1.53e-72,177;CL:0000860,9.81e-67,42;CL:0002057,9.81e-67,42;CL:0000473,7.40e-57,48;CL:0000234,7.40e-57,48;CL:0000766,9.93e-53,72;CL:0002194,2.31e-45,59;CL:0000576,2.31e-45,59;CL:0000040,2.31e-45,59;CL:0000559,2.31e-45,59;CL:0002009,1.67e-43,61;CL:0000838,4.64e-41,52;CL:0000557,1.27e-40,67;CL:0000542,4.44e-40,53;CL:0000051,4.44e-40,53;CL:0000839,2.41e-39,66;CL:0000763,1.12e-33,108;CL:0000049,1.12e-33,108;CL:0000945,5.16e-29,24;CL:0000826,5.16e-29,24;CL:0000134,1.46e-25,354;CL:0002320,1.20e-24,361;CL:0000219,1.94e-21,386;CL:0000625,8.74e-20,11;CL:0000048,1.60e-17,427;CL:0000236,1.60e-17,14;CL:0000723,5.53e-17,433;CL:0000034,5.74e-17,441;CL:0000094,3.02e-14,8;CL:0000791,3.30e-13,18;CL:0000789,3.30e-13,18;CL:0002420,3.30e-13,18;CL:0002419,3.30e-13,18;CL:0000790,3.30e-13,18;CL:0000084,1.24e-10,25;CL:0000827,1.24e-10,25;CL:0000081,5.64e-10,11;CL:0000623,3.14e-07,3;CL:0000825,3.14e-07,3;CL:0002393,4.89e-07,9;CL:0002397,4.89e-07,9|ontology_enrichment_development_v019=CL:0002057;1.50e-48;42!CL:0000051;9.03e-23;53!CL:0000790;4.44e-13;18!CL:0000049;1.77e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.25e-45!102;UBERON:0003061!7.25e-45!102;UBERON:0002193!2.18e-40!112;UBERON:0002371!1.18e-29!80;UBERON:0001474!1.60e-26!86;UBERON:0002405!5.42e-23!115;UBERON:0004765!2.25e-20!101;UBERON:0001434!2.25e-20!101;UBERON:0002384!2.90e-16!375;UBERON:0000178!4.37e-13!15;UBERON:0000179!4.37e-13!15;UBERON:0000463!4.37e-13!15;UBERON:0003081!1.21e-11!216;UBERON:0002204!3.57e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;4.59e-18;15!UBERON:0000179;4.59e-18;15!UBERON:0000463;4.59e-18;15!UBERON:0002390;3.41e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.75e-50,98;UBERON:0003061,7.75e-50,98;UBERON:0002193,8.60e-44,108;UBERON:0002371,1.98e-34,76;UBERON:0001474,4.66e-31,82;UBERON:0002405,3.49e-29,93;UBERON:0004765,2.89e-27,90;UBERON:0002384,2.09e-23,371;UBERON:0001434,2.18e-23,100;UBERON:0000178,4.42e-18,15;UBERON:0000179,4.42e-18,15;UBERON:0000463,4.42e-18,15;UBERON:0003081,4.37e-17,203;UBERON:0002204,1.09e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.531798542664,10.6730766284929,14.2466514177759,4.32700704533794,4.98978217526377,2.63187409637329,0,0,0,2.01414721508784,4.40724620711007,0.587200878669695,4.9859586767869,2.00544447470142,4.34021741431704,0.671746422719773,1.6194683300949,0,3.05336301437086,7.935394817465,7.03493777444667,7.67015821788759,11.5127008646111,9.29119112685311,9.20615655430881,8.96562472851852,6.85798466676897,8.61864201841546,9.68227025375739,8.12558919566051,7.15320890261898,5.73102915121476,5.39336362668203,5.50951006267625,7.06043859567406,7.67204550958849,2.96866170168044,9.77371922345996,5.96714650745772,3.77272010217159,5.10646702222026,3.11411124497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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3697 | |||
|TSSclassifier=S | |||
|UniProt=P09769 | |||
|association_with_transcript=0bp_to_ENST00000399173,ENST00000468038,NM_001042747,uc001bok.2_5end | |||
|description=CAGE_peak_8_at_FGR_5end | |||
|id=chr1:27952741..27952753,- | |||
|ontology_enrichment_celltype=CL:0000738!2.91e-80!140;CL:0002087!2.38e-77!119;CL:0000037!3.66e-69!172;CL:0000566!3.66e-69!172;CL:0002031!2.39e-65!124;CL:0000988!1.14e-63!182;CL:0002032!3.01e-63!165;CL:0000837!3.01e-63!165;CL:0002057!6.44e-53!42;CL:0000860!2.16e-48!45;CL:0000766!6.52e-43!76;CL:0002194!3.93e-38!63;CL:0000576!3.93e-38!63;CL:0000040!3.93e-38!63;CL:0000559!3.93e-38!63;CL:0002009!1.70e-36!65;CL:0000557!9.15e-34!71;CL:0000839!8.06e-33!70;CL:0000542!2.00e-32!53;CL:0000051!2.00e-32!53;CL:0000838!1.31e-31!52;CL:0000763!1.93e-29!112;CL:0000049!1.93e-29!112;CL:0000945!8.31e-23!24;CL:0000826!8.31e-23!24;CL:0000134!9.22e-18!358;CL:0002320!6.94e-17!365;CL:0000236!7.83e-15!14;CL:0000625!1.14e-14!11;CL:0000219!7.85e-14!390;CL:0000094!1.09e-10!8;CL:0000048!2.79e-10!430;CL:0000723!8.66e-10!436;CL:0000034!1.34e-09!444;CL:0000791!2.16e-09!18;CL:0000789!2.16e-09!18;CL:0002420!2.16e-09!18;CL:0002419!2.16e-09!18;CL:0000790!2.16e-09!18;CL:0002393!8.49e-09!9;CL:0002397!8.49e-09!9;CL:0000084!2.21e-08!25;CL:0000827!2.21e-08!25;CL:0000081!2.61e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-57;33!CL:0002057;1.10e-57;33!CL:0000473;1.74e-39;39!CL:0000234;1.74e-39;39!CL:0000576;1.27e-37;48!CL:0002087;2.43e-30;104!CL:0000945;4.73e-29;24!CL:0000766;3.36e-25;69!CL:0000542;9.03e-23;53!CL:0000625;1.32e-19;11!CL:0000738;1.96e-19;136!CL:0000236;9.68e-16;13!CL:0000094;3.16e-14;8!CL:0000791;4.44e-13;18!CL:0000789;4.44e-13;18!CL:0002419;4.44e-13;18!CL:0000763;1.36e-12;100!CL:0000988;2.45e-12;177!CL:0002393;5.53e-11;6!CL:0002397;5.53e-11;6!CL:0000084;1.55e-10;25!CL:0000081;5.83e-10;11!CL:0000219;1.09e-08;193!CL:0000623;3.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.83e-96,136;CL:0002087,1.93e-94,115;CL:0002031,5.62e-82,120;CL:0000037,1.47e-77,168;CL:0002032,2.65e-75,161;CL:0000837,2.65e-75,161;CL:0000988,1.53e-72,177;CL:0000860,9.81e-67,42;CL:0002057,9.81e-67,42;CL:0000473,7.40e-57,48;CL:0000234,7.40e-57,48;CL:0000766,9.93e-53,72;CL:0002194,2.31e-45,59;CL:0000576,2.31e-45,59;CL:0000040,2.31e-45,59;CL:0000559,2.31e-45,59;CL:0002009,1.67e-43,61;CL:0000838,4.64e-41,52;CL:0000557,1.27e-40,67;CL:0000542,4.44e-40,53;CL:0000051,4.44e-40,53;CL:0000839,2.41e-39,66;CL:0000763,1.12e-33,108;CL:0000049,1.12e-33,108;CL:0000945,5.16e-29,24;CL:0000826,5.16e-29,24;CL:0000134,1.46e-25,354;CL:0002320,1.20e-24,361;CL:0000219,1.94e-21,386;CL:0000625,8.74e-20,11;CL:0000048,1.60e-17,427;CL:0000236,1.60e-17,14;CL:0000723,5.53e-17,433;CL:0000034,5.74e-17,441;CL:0000094,3.02e-14,8;CL:0000791,3.30e-13,18;CL:0000789,3.30e-13,18;CL:0002420,3.30e-13,18;CL:0002419,3.30e-13,18;CL:0000790,3.30e-13,18;CL:0000084,1.24e-10,25;CL:0000827,1.24e-10,25;CL:0000081,5.64e-10,11;CL:0000623,3.14e-07,3;CL:0000825,3.14e-07,3;CL:0002393,4.89e-07,9;CL:0002397,4.89e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-48;42!CL:0000051;9.03e-23;53!CL:0000790;4.44e-13;18!CL:0000049;1.77e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.25e-45!102;UBERON:0003061!7.25e-45!102;UBERON:0002193!2.18e-40!112;UBERON:0002371!1.18e-29!80;UBERON:0001474!1.60e-26!86;UBERON:0002405!5.42e-23!115;UBERON:0004765!2.25e-20!101;UBERON:0001434!2.25e-20!101;UBERON:0002384!2.90e-16!375;UBERON:0000178!4.37e-13!15;UBERON:0000179!4.37e-13!15;UBERON:0000463!4.37e-13!15;UBERON:0003081!1.21e-11!216;UBERON:0002204!3.57e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.59e-18;15!UBERON:0000179;4.59e-18;15!UBERON:0000463;4.59e-18;15!UBERON:0002390;3.41e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.75e-50,98;UBERON:0003061,7.75e-50,98;UBERON:0002193,8.60e-44,108;UBERON:0002371,1.98e-34,76;UBERON:0001474,4.66e-31,82;UBERON:0002405,3.49e-29,93;UBERON:0004765,2.89e-27,90;UBERON:0002384,2.09e-23,371;UBERON:0001434,2.18e-23,100;UBERON:0000178,4.42e-18,15;UBERON:0000179,4.42e-18,15;UBERON:0000463,4.42e-18,15;UBERON:0003081,4.37e-17,203;UBERON:0002204,1.09e-09,167 | |||
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|short_description=p8@FGR | |||
}} |
Revision as of 05:04, 12 September 2013
Short description: | p8@FGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FGR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399173, ENST00000468038, NM_001042747, uc001bok.2_5end |
EntrezGene: | FGR |
HGNC: | 3697 |
UniProt: | P09769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.75e-50 | 98 |
blood island | 7.75e-50 | 98 |
hemolymphoid system | 8.60e-44 | 108 |
bone marrow | 1.98e-34 | 76 |
bone element | 4.66e-31 | 82 |
immune system | 3.49e-29 | 93 |
skeletal element | 2.89e-27 | 90 |
connective tissue | 2.09e-23 | 371 |
skeletal system | 2.18e-23 | 100 |
blood | 4.42e-18 | 15 |
haemolymphatic fluid | 4.42e-18 | 15 |
organism substance | 4.42e-18 | 15 |
lateral plate mesoderm | 4.37e-17 | 203 |
musculoskeletal system | 1.09e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.