FFCP PHASE1:Hg19::chr1:31887702..31887740,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=347735|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=23231|TSSclassifier=W|UniProt=|association_with_transcript=125bp_to_uc001bsv.2_5end|description=CAGE_peak_11_at_SERINC2_5end|id=chr1:31887702..31887740,+|ontology_enrichment_celltype=CL:0000223!3.96e-21!59;CL:0002076!1.35e-20!43;CL:0000066!2.31e-14!254;CL:0002251!3.32e-12!21;CL:0002327!4.31e-10!4;CL:0002368!1.23e-09!13;CL:0002621!4.43e-07!3|ontology_enrichment_celltype_v019=CL:0002327;8.19e-12;4!CL:0002252;9.60e-12;1!CL:0002076;1.93e-09;42!CL:0002251;1.23e-08;20!CL:0002159;3.05e-07;14|ontology_enrichment_celltype_v019_2=CL:0002252,7.76e-12,1;CL:0002327,7.78e-12,4;CL:0002076,1.35e-11,42;CL:0000223,1.19e-10,58;CL:0002251,9.93e-09,20;CL:0000076,1.58e-07,63;CL:0002159,2.46e-07,14|ontology_enrichment_development_v019=UBERON:0008425;2.62e-12;1!UBERON:0005754;4.06e-12;1!CL:0000223;6.56e-09;58|ontology_enrichment_disease=DOID:1749!2.21e-13!14|ontology_enrichment_disease_v019=DOID:1749;2.97e-12;14|ontology_enrichment_disease_v019_2=DOID:1749,2.61e-12,14|ontology_enrichment_uberon=UBERON:0004119!3.15e-19!169;UBERON:0000925!3.15e-19!169;UBERON:0006595!3.15e-19!169;UBERON:0000161!4.08e-15!35;UBERON:0001007!1.21e-14!155;UBERON:0001555!1.21e-14!155;UBERON:0007026!1.21e-14!155;UBERON:0003102!1.37e-12!95;UBERON:0000165!1.27e-11!28;UBERON:0000930!1.27e-11!28;UBERON:0001004!1.99e-10!72;UBERON:0000166!3.10e-10!21;UBERON:0001911!4.31e-10!4;UBERON:0005333!4.31e-10!4;UBERON:0008425!4.31e-10!4;UBERON:0005311!4.31e-10!4;UBERON:0001444!1.31e-09!48;UBERON:0004921!4.20e-09!129;UBERON:0004185!4.20e-09!129;UBERON:0001828!5.66e-09!8;UBERON:0005153!3.13e-08!37;UBERON:0002365!6.23e-08!31;UBERON:0002330!6.23e-08!31;UBERON:0000077!8.72e-08!130;UBERON:0006947!8.85e-08!3;UBERON:0004054!8.85e-08!3;UBERON:0005911!1.17e-07!82;UBERON:0003729!1.38e-07!5;UBERON:0002530!1.86e-07!59;UBERON:0000365!2.21e-07!5;UBERON:0001949!4.43e-07!3|ontology_enrichment_uberon_v019=UBERON:0003343;2.74e-24;4!UBERON:0004785;2.74e-24;4!UBERON:0000974;2.05e-16;6!UBERON:0006947;4.59e-15;3!UBERON:0004054;4.59e-15;3!UBERON:0000998;4.06e-12;1!UBERON:0006868;4.06e-12;1!UBERON:0001911;8.19e-12;4!UBERON:0001000;9.60e-12;1!UBERON:0005352;9.60e-12;1!UBERON:0005904;1.55e-11;4!UBERON:0002365;1.69e-08;31!UBERON:0002330;1.69e-08;31!UBERON:0003729;7.20e-08;13|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.40e-24,4;UBERON:0004785,1.40e-24,4;UBERON:0006947,4.94e-15,3;UBERON:0004054,4.94e-15,3;UBERON:0000998,4.06e-12,1;UBERON:0006868,4.06e-12,1;UBERON:0001911,7.78e-12,4;UBERON:0005333,7.78e-12,4;UBERON:0008425,7.78e-12,4;UBERON:0005311,7.78e-12,4;UBERON:0001000,1.07e-11,1;UBERON:0005352,1.07e-11,1;UBERON:0005904,1.64e-11,4;UBERON:0000974,3.41e-10,10;UBERON:0002365,1.61e-08,31;UBERON:0002330,1.61e-08,31;UBERON:0002530,3.35e-08,59;UBERON:0003729,5.89e-08,13;UBERON:0005157,1.10e-07,47;UBERON:0005153,4.95e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.0654895377488563,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0.816616685019573,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.343135620597051,1.86575485194663,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.985143749731331,0.871901815541886,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,2.00506470303285,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0.290033387828457,0,1.15741646340759,0.826424576804891,1.15314040419064,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,4.1106199998212,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,1.18375320854817,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=347735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23231 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=125bp_to_uc001bsv.2_5end | |||
|description=CAGE_peak_11_at_SERINC2_5end | |||
|id=chr1:31887702..31887740,+ | |||
|ontology_enrichment_celltype=CL:0000223!3.96e-21!59;CL:0002076!1.35e-20!43;CL:0000066!2.31e-14!254;CL:0002251!3.32e-12!21;CL:0002327!4.31e-10!4;CL:0002368!1.23e-09!13;CL:0002621!4.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.19e-12;4!CL:0002252;9.60e-12;1!CL:0002076;1.93e-09;42!CL:0002251;1.23e-08;20!CL:0002159;3.05e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,7.76e-12,1;CL:0002327,7.78e-12,4;CL:0002076,1.35e-11,42;CL:0000223,1.19e-10,58;CL:0002251,9.93e-09,20;CL:0000076,1.58e-07,63;CL:0002159,2.46e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.62e-12;1!UBERON:0005754;4.06e-12;1!CL:0000223;6.56e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!2.21e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.97e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.61e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-19!169;UBERON:0000925!3.15e-19!169;UBERON:0006595!3.15e-19!169;UBERON:0000161!4.08e-15!35;UBERON:0001007!1.21e-14!155;UBERON:0001555!1.21e-14!155;UBERON:0007026!1.21e-14!155;UBERON:0003102!1.37e-12!95;UBERON:0000165!1.27e-11!28;UBERON:0000930!1.27e-11!28;UBERON:0001004!1.99e-10!72;UBERON:0000166!3.10e-10!21;UBERON:0001911!4.31e-10!4;UBERON:0005333!4.31e-10!4;UBERON:0008425!4.31e-10!4;UBERON:0005311!4.31e-10!4;UBERON:0001444!1.31e-09!48;UBERON:0004921!4.20e-09!129;UBERON:0004185!4.20e-09!129;UBERON:0001828!5.66e-09!8;UBERON:0005153!3.13e-08!37;UBERON:0002365!6.23e-08!31;UBERON:0002330!6.23e-08!31;UBERON:0000077!8.72e-08!130;UBERON:0006947!8.85e-08!3;UBERON:0004054!8.85e-08!3;UBERON:0005911!1.17e-07!82;UBERON:0003729!1.38e-07!5;UBERON:0002530!1.86e-07!59;UBERON:0000365!2.21e-07!5;UBERON:0001949!4.43e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.74e-24;4!UBERON:0004785;2.74e-24;4!UBERON:0000974;2.05e-16;6!UBERON:0006947;4.59e-15;3!UBERON:0004054;4.59e-15;3!UBERON:0000998;4.06e-12;1!UBERON:0006868;4.06e-12;1!UBERON:0001911;8.19e-12;4!UBERON:0001000;9.60e-12;1!UBERON:0005352;9.60e-12;1!UBERON:0005904;1.55e-11;4!UBERON:0002365;1.69e-08;31!UBERON:0002330;1.69e-08;31!UBERON:0003729;7.20e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.40e-24,4;UBERON:0004785,1.40e-24,4;UBERON:0006947,4.94e-15,3;UBERON:0004054,4.94e-15,3;UBERON:0000998,4.06e-12,1;UBERON:0006868,4.06e-12,1;UBERON:0001911,7.78e-12,4;UBERON:0005333,7.78e-12,4;UBERON:0008425,7.78e-12,4;UBERON:0005311,7.78e-12,4;UBERON:0001000,1.07e-11,1;UBERON:0005352,1.07e-11,1;UBERON:0005904,1.64e-11,4;UBERON:0000974,3.41e-10,10;UBERON:0002365,1.61e-08,31;UBERON:0002330,1.61e-08,31;UBERON:0002530,3.35e-08,59;UBERON:0003729,5.89e-08,13;UBERON:0005157,1.10e-07,47;UBERON:0005153,4.95e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.0654895377488563,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0.816616685019573,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.343135620597051,1.86575485194663,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.985143749731331,0.871901815541886,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,2.00506470303285,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0.290033387828457,0,1.15741646340759,0.826424576804891,1.15314040419064,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,4.1106199998212,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0.52418000472609,0,0,0.0730893170861856,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,3.95691030930823,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04257927353179,0,1.46742878817343,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.426067023795788,2.11693525095465,0.22910686854405,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.143444410785353,0,0.651226148887796,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |||
|short_description=p11@SERINC2 | |||
}} |
Revision as of 05:14, 12 September 2013
Short description: | p11@SERINC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SERINC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_uc001bsv.2_5end |
EntrezGene: | SERINC2 |
HGNC: | 23231 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 7.76e-12 | 1 |
mammary gland epithelial cell | 7.78e-12 | 4 |
endo-epithelial cell | 1.35e-11 | 42 |
endodermal cell | 1.19e-10 | 58 |
epithelial cell of alimentary canal | 9.93e-09 | 20 |
squamous epithelial cell | 1.58e-07 | 63 |
general ecto-epithelial cell | 2.46e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.40e-24 | 4 |
respiratory system mucosa | 1.40e-24 | 4 |
male genital duct | 4.94e-15 | 3 |
internal male genitalia | 4.94e-15 | 3 |
seminal vesicle | 4.06e-12 | 1 |
seminal fluid secreting gland | 4.06e-12 | 1 |
mammary gland | 7.78e-12 | 4 |
mammary bud | 7.78e-12 | 4 |
mammary ridge | 7.78e-12 | 4 |
mammary placode | 7.78e-12 | 4 |
vas deferens | 1.07e-11 | 1 |
spermatic cord | 1.07e-11 | 1 |
duct of male reproductive system | 1.64e-11 | 4 |
neck | 3.41e-10 | 10 |
exocrine gland | 1.61e-08 | 31 |
exocrine system | 1.61e-08 | 31 |
gland | 3.35e-08 | 59 |
mouth mucosa | 5.89e-08 | 13 |
epithelial fold | 1.10e-07 | 47 |
epithelial bud | 4.95e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.61e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.