FFCP PHASE1:Hg19::chr1:38619558..38619563,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C232|description=CAGE_peak_at_chr1:38619558..38619563,+|id=chr1:38619558..38619563,+|ontology_enrichment_celltype=CL:0000945!1.71e-15!24;CL:0000826!1.71e-15!24;CL:0000785!9.74e-14!2;CL:0000955!9.74e-14!2;CL:0000818!9.74e-14!2;CL:0000954!9.74e-14!2;CL:0000816!9.74e-14!2;CL:0002322!1.93e-11!5;CL:0000817!1.90e-09!3;CL:0000819!9.10e-08!1;CL:0000946!1.18e-07!1;CL:0000786!1.18e-07!1;CL:0000980!1.18e-07!1|ontology_enrichment_celltype_v019=CL:0000785;8.34e-34;1!CL:0000819;8.34e-34;1!CL:0000945;4.11e-13;24!CL:0000333;5.92e-08;5|ontology_enrichment_celltype_v019_2=CL:0000819,9.85e-34,1;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000945,4.28e-13,24;CL:0000826,4.28e-13,24;CL:0000817,3.24e-12,3|ontology_enrichment_development_v019=CL:0000954;1.17e-17;2|ontology_enrichment_disease=DOID:0060058!1.92e-10!10;DOID:0060073!9.10e-08!1;DOID:8675!9.10e-08!1;DOID:3095!6.45e-07!22;DOID:2994!6.45e-07!22;DOID:5409!6.85e-07!4|ontology_enrichment_disease_v019=DOID:0060073;8.34e-34;1!DOID:8675;8.34e-34;1!DOID:0060058;3.07e-30;10!DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22!DOID:169;7.80e-07;6|ontology_enrichment_disease_v019_2=DOID:0060073,9.85e-34,1;DOID:8675,9.85e-34,1;DOID:0060058,3.39e-30,10;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22;DOID:169,7.58e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000013;5.92e-08;5!UBERON:0002410;5.92e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0,0,0,0,2.01414721508784,6.25544622944655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.45963831372533,0,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29063767423586,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0952587833167,0,0.305966489225945,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:38619558..38619563,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C232 | |||
|description=CAGE_peak_at_chr1:38619558..38619563,+ | |||
|id=chr1:38619558..38619563,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.71e-15!24;CL:0000826!1.71e-15!24;CL:0000785!9.74e-14!2;CL:0000955!9.74e-14!2;CL:0000818!9.74e-14!2;CL:0000954!9.74e-14!2;CL:0000816!9.74e-14!2;CL:0002322!1.93e-11!5;CL:0000817!1.90e-09!3;CL:0000819!9.10e-08!1;CL:0000946!1.18e-07!1;CL:0000786!1.18e-07!1;CL:0000980!1.18e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000785;8.34e-34;1!CL:0000819;8.34e-34;1!CL:0000945;4.11e-13;24!CL:0000333;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.85e-34,1;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000945,4.28e-13,24;CL:0000826,4.28e-13,24;CL:0000817,3.24e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.17e-17;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.92e-10!10;DOID:0060073!9.10e-08!1;DOID:8675!9.10e-08!1;DOID:3095!6.45e-07!22;DOID:2994!6.45e-07!22;DOID:5409!6.85e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.34e-34;1!DOID:8675;8.34e-34;1!DOID:0060058;3.07e-30;10!DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22!DOID:169;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.85e-34,1;DOID:8675,9.85e-34,1;DOID:0060058,3.39e-30,10;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22;DOID:169,7.58e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.92e-08;5!UBERON:0002410;5.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0,0,0,0,2.01414721508784,6.25544622944655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.45963831372533,0,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29063767423586,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0952587833167,0,0.305966489225945,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:38619558..38619563,+ | |||
}} |
Revision as of 05:36, 12 September 2013
Short description: | p@chr1:38619558..38619563, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:38619558..38619563, + |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.85e-34 | 1 |
mature B cell | 1.27e-17 | 2 |
pre-B-II cell | 1.27e-17 | 2 |
transitional stage B cell | 1.27e-17 | 2 |
small pre-B-II cell | 1.27e-17 | 2 |
immature B cell | 1.27e-17 | 2 |
lymphocyte of B lineage | 4.28e-13 | 24 |
pro-B cell | 4.28e-13 | 24 |
precursor B cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.73e-08 | 5 |
autonomic nervous system | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.85e-34 | 1 |
lymphosarcoma | 9.85e-34 | 1 |
lymphoma | 3.39e-30 | 10 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |
neuroendocrine tumor | 7.58e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.