FFCP PHASE1:Hg19::chr1:89149914..89149995,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9406|TSSclassifier=S|UniProt=E9PES5,Q16513,B1AL79|association_with_transcript=0bp_to_ENST00000370505,NM_006256,uc001dmm.1,uc001dmn.2,uc009wcv.2,uc010osp.1,uc010osq.1_5end|coexpression_cluster_id=C468|description=CAGE_peak_1_at_PKN2_5end|id=chr1:89149914..89149995,+|ontology_enrichment_celltype=CL:0000738!1.72e-10!140;CL:0000766!1.01e-09!76;CL:0002057!1.79e-09!42;CL:0000860!2.63e-09!45;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0002032!3.45e-08!165;CL:0000837!3.45e-08!165;CL:0000763!5.23e-08!112;CL:0000049!5.23e-08!112;CL:0000839!9.19e-08!70;CL:0002031!9.62e-08!124;CL:0000557!1.35e-07!71;CL:0002087!4.23e-07!119|ontology_enrichment_celltype_v019=CL:0000860;5.73e-07;33!CL:0002057;5.73e-07;33|ontology_enrichment_celltype_v019_2=CL:0000738,2.22e-10,136;CL:0000766,1.03e-09,72;CL:0000860,1.79e-09,42;CL:0002057,1.79e-09,42;CL:0000037,4.66e-09,168;CL:0002032,4.70e-08,161;CL:0000837,4.70e-08,161;CL:0000763,6.62e-08,108;CL:0000049,6.62e-08,108;CL:0000839,1.00e-07,66;CL:0002031,1.25e-07,120;CL:0000557,1.49e-07,67;CL:0002087,5.50e-07,115;CL:0000473,7.36e-07,48;CL:0000234,7.36e-07,48;CL:0000988,8.64e-07,177|ontology_enrichment_development_v019=CL:0002057;6.78e-07;42|ontology_enrichment_disease=DOID:0050687!4.67e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,4.67e-08,143|ontology_enrichment_uberon=UBERON:0007023!5.87e-09!115;UBERON:0002390!2.31e-08!102;UBERON:0003061!2.31e-08!102;UBERON:0002193!1.54e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.81e-09,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,1.96e-07,108|phase1_expression=26.3433649942307,20.1254492457524,26.2175191618506,4.00293193412522,12.9618717383913,7.85104671690332,2.53299878168311,17.0564365825244,17.760622717589,9.82935746006035,7.6758128476967,18.7859580031948,8.70431028153897,16.4609249436862,6.95934489028623,21.5144046864568,21.6970030088632,16.7971320789096,14.1500511649247,11.0808952269109,8.16002764977012,14.105462466514,40.0730381983479,39.009211145772,43.5632959393966,19.0269380312399,18.3084314473379,22.4325726743986,36.5828777469481,42.9888925868878,46.4448369948228,14.7107395916628,9.33738348212575,7.76483421350254,37.494125080866,31.4194003797202,25.8368386614666,54.8455454446559,68.9872899297287,66.6223373097665,39.6330389404666,54.0902422251696,67.7423742877911,58.5954902281646,48.3681207921676,65.982864643086,36.7237878310982,37.4162778099861,36.2356453947271,29.3446240168593,33.3008918487831,34.0534411039563,45.8511755379703,56.8026521553767,55.5248595036801,34.2601057967541,30.5654888064787,34.3826931200979,48.0551711022317,45.8928508718814,53.0649814413204,47.8284385270738,37.6986312904884,60.5239145756426,42.3705488397733,48.2277440987469,55.4311801606062,32.6623264833766,34.4178726157333,38.4424255128056,76.8857368344378,46.7712597704207,43.9882718542829,40.5610149718928,33.1662707945468,37.7385561915077,42.0109080487892,43.1007682455123,67.1832952393795,34.2015292489498,46.9443358189853,49.6846498239804,49.2789484491704,43.1449502897084,32.022333139088,31.151306247355,35.6352428462051,30.4618793175876,33.0522436392431,50.5648489903743,67.1671303549149,49.9151610965298,59.2523503594105,43.6165384310785,24.6623767711876,23.967951714532,106.026566091356,73.4930126340938,62.0916526978518,37.1154019767305,35.8514493296949,41.1899590989218,56.4997512382943,24.5103005147382,43.3070683988011,40.7622366033863,51.1819302515879,27.7958163804715,29.0032345058528,28.7766333056433,33.1620021343018,32.7477486880609,60.2043446437965,59.3940638359163,50.1770514263889,28.6672637024842,34.8730649177748,32.9882347663325,53.8931944001541,38.8649805475398,37.1117568698159,44.6712460890736,17.7678640511772,24.1894695081851,36.2299107001803,40.9624646036149,41.8775278429734,64.1109443454649,63.1158862049077,83.2740322326094,36.5710299470943,16.7675214925909,18.1564837817813,18.4333967716129,14.0374614978049,16.3676566425731,22.2680065174308,19.4653948121054,40.9335758320414,34.1463272092348,33.6407229204673,23.3797649763417,12.0217445136539,6.67411997011973,24.0165071304466,25.5970713829923,19.0129883541977,51.9909560985645,42.3276233977295,25.2591100904104,20.0750031440372,12.0432843314857,16.6627440771645,26.0041653285044,11.7459842138774,21.7343253132653,19.0185419548498,43.9308490587859,69.3744212239085,87.0273593188143,9.66790361061953,23.5684352772739,13.4234131651493,15.4418493745265,14.5825550618717,51.7045426764822,47.3756976241218,54.6165680344113,12.2653309972707,28.4779697870439,29.8618842606564,171.314542666882,170.623316225263,6.97750483428055,20.3758500195081,17.2217495863828,62.0999058013996,22.9469296599051,17.7334191099179,13.4562624034154,14.9448594021587,10.6067045819379,57.8852525843565,20.2066008104532,19.2885045673881,10.5950199351452,21.89468513024,8.90421440968427,20.9147251476315,15.4027391817001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72796068586,42.6741613414793,35.1742488719241,28.6187837912693,42.3204450343847,55.486814166106,57.0547667982434,73.7625499978204,41.6014116062776,14.0585464818051,75.2832361430267,35.4122308809293,16.114329522898,32.1487247204394,35.8165114092463,47.2528418960094,27.0238814655523,43.7224574769511,54.7895232305697,36.491762915947,55.8969474827849,36.6674671626247,56.8849002237816,48.0077086770357,57.7209464044564,30.4650318597496,29.2174791469882,33.1193845562263,63.5958888868964,12.4765934057881,40.2328802483922,40.4763672605999,60.1209611271119,63.0043888496138,8.37557241293664,17.1997009015938,29.4179785628194,36.6100371384856,30.1137274706205,43.3777320915889,33.5707378419928,27.8355463521168,67.9995390282795,39.0678903981716,35.4132379787235,50.1842783081339,40.6605895340256,68.1631203821661,34.7214540203349,98.4742257457374,45.0232694638152,32.9222107453066,40.2043247676405,40.0650130072764,31.9982801397361,40.9924032451379,41.4202613031732,32.456078905373,41.1649560751759,35.5807541614146,14.8912322328144,41.2459598179069,45.1705435796085,48.3855441135685,79.6066663188704,39.909447656195,35.8348957878628,32.8164849361824,13.3943235676102,65.888954241397,56.0768450946325,16.3677807993371,15.7139713734682,14.7093031122088,33.8126018558012,46.2193369406432,29.7741477376877,39.4696771101469,58.7878291584233,15.989712519063,38.3582535117334,41.147833132504,20.6332380220257,31.5084386994336,44.4761882206149,37.7424147964736,43.089662094937,59.6801526884696,82.9318182992662,27.4723063322503,36.9789989596138,45.0721331376829,31.5689284450594,34.9077967106987,27.2775814709079,40.5947682522548,52.2276759777241,59.4243860860114,61.3682238796864,42.4759021031268,37.5469344805533,42.2353696326218,30.6826024898995,57.7792573208349,40.6111632253163,40.4560325117963,13.4638766767358|short_description=p1@PKN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9406 | |||
|TSSclassifier=S | |||
|UniProt=E9PES5,Q16513,B1AL79 | |||
|association_with_transcript=0bp_to_ENST00000370505,NM_006256,uc001dmm.1,uc001dmn.2,uc009wcv.2,uc010osp.1,uc010osq.1_5end | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_1_at_PKN2_5end | |||
|id=chr1:89149914..89149995,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.72e-10!140;CL:0000766!1.01e-09!76;CL:0002057!1.79e-09!42;CL:0000860!2.63e-09!45;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0002032!3.45e-08!165;CL:0000837!3.45e-08!165;CL:0000763!5.23e-08!112;CL:0000049!5.23e-08!112;CL:0000839!9.19e-08!70;CL:0002031!9.62e-08!124;CL:0000557!1.35e-07!71;CL:0002087!4.23e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-07;33!CL:0002057;5.73e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.22e-10,136;CL:0000766,1.03e-09,72;CL:0000860,1.79e-09,42;CL:0002057,1.79e-09,42;CL:0000037,4.66e-09,168;CL:0002032,4.70e-08,161;CL:0000837,4.70e-08,161;CL:0000763,6.62e-08,108;CL:0000049,6.62e-08,108;CL:0000839,1.00e-07,66;CL:0002031,1.25e-07,120;CL:0000557,1.49e-07,67;CL:0002087,5.50e-07,115;CL:0000473,7.36e-07,48;CL:0000234,7.36e-07,48;CL:0000988,8.64e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-07;42 | |||
|ontology_enrichment_disease=DOID:0050687!4.67e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.67e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.87e-09!115;UBERON:0002390!2.31e-08!102;UBERON:0003061!2.31e-08!102;UBERON:0002193!1.54e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.81e-09,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,1.96e-07,108 | |||
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| |||
|short_description=p1@PKN2 | |||
}} |
Revision as of 07:03, 12 September 2013
Short description: | p1@PKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PKN2_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000370505, NM_006256, uc001dmm.1, uc001dmn.2, uc009wcv.2, uc010osp.1, uc010osq.1_5end |
EntrezGene: | PKN2 |
HGNC: | 9406 |
UniProt: | E9PES5Q16513B1AL79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.22e-10 | 136 |
myeloid leukocyte | 1.03e-09 | 72 |
classical monocyte | 1.79e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-09 | 42 |
hematopoietic stem cell | 4.66e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.70e-08 | 161 |
myeloid cell | 6.62e-08 | 108 |
common myeloid progenitor | 6.62e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.00e-07 | 66 |
hematopoietic lineage restricted progenitor cell | 1.25e-07 | 120 |
granulocyte monocyte progenitor cell | 1.49e-07 | 67 |
nongranular leukocyte | 5.50e-07 | 115 |
defensive cell | 7.36e-07 | 48 |
phagocyte | 7.36e-07 | 48 |
hematopoietic cell | 8.64e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.81e-09 | 114 |
hematopoietic system | 2.83e-08 | 98 |
blood island | 2.83e-08 | 98 |
hemolymphoid system | 1.96e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.67e-08 | 143 |
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