FFCP PHASE1:Hg19::chr1:92949213..92949223,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2672|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4237|TSSclassifier=W|UniProt=Q99684|association_with_transcript=-125bp_to_BC074866,BC074867_5end|coexpression_cluster_id=C150|description=CAGE_peak_9_at_GFI1_5end|id=chr1:92949213..92949223,-|ontology_enrichment_celltype=CL:0000784!9.42e-12!3;CL:0000242!9.55e-09!2;CL:0000037!6.80e-07!172;CL:0000566!6.80e-07!172|ontology_enrichment_celltype_v019=CL:0000123;2.03e-45;2!CL:0000242;2.03e-45;2!CL:0000784;4.83e-30;3!CL:0000312;7.24e-19;5!CL:0000240;6.71e-16;6!CL:0000311;6.71e-16;6!CL:0000079;6.71e-16;6!CL:0000237;6.71e-16;6!CL:0000362;6.22e-11;9!CL:0000451;6.10e-09;10!CL:0002159;2.36e-07;14|ontology_enrichment_celltype_v019_2=CL:0000242,2.04e-45,2;CL:0000784,6.50e-30,3;CL:0000312,7.24e-19,5;CL:0000240,6.71e-16,6;CL:0000311,6.71e-16,6;CL:0000079,6.71e-16,6;CL:0000237,6.71e-16,6;CL:0000036,6.71e-16,6;CL:0000357,6.71e-16,6;CL:0000114,6.71e-16,6;CL:0000362,6.22e-11,9;CL:0000451,6.61e-09,10;CL:0002159,2.36e-07,14|ontology_enrichment_development_v019=CL:0000357;6.71e-16;6!CL:0000114;6.71e-16;6|ontology_enrichment_disease=DOID:8692!2.29e-09!31;DOID:1240!1.37e-08!39;DOID:74!2.37e-07!2;DOID:2531!3.38e-07!51;DOID:0060083!3.38e-07!51|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4|ontology_enrichment_uberon=UBERON:0004177!5.19e-08!7|ontology_enrichment_uberon_v019=UBERON:0001003;6.40e-07;15!UBERON:0007376;6.40e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.40e-07,15;UBERON:0007376,6.40e-07,15;UBERON:0007383,6.40e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0.211673582723883,0.649243880549111,0,0.684704037099577,0.94007937463814,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0.781552381608161,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,2.75794698593172,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83503302194451,5.94176217304383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87151570769685,0.198950775161368,0,0,0,1.35866559210006,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.968833647540092,0.806971285846153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p9@GFI1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4237 | |||
|TSSclassifier=W | |||
|UniProt=Q99684 | |||
|association_with_transcript=-125bp_to_BC074866,BC074867_5end | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_9_at_GFI1_5end | |||
|id=chr1:92949213..92949223,- | |||
|ontology_enrichment_celltype=CL:0000784!9.42e-12!3;CL:0000242!9.55e-09!2;CL:0000037!6.80e-07!172;CL:0000566!6.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.03e-45;2!CL:0000242;2.03e-45;2!CL:0000784;4.83e-30;3!CL:0000312;7.24e-19;5!CL:0000240;6.71e-16;6!CL:0000311;6.71e-16;6!CL:0000079;6.71e-16;6!CL:0000237;6.71e-16;6!CL:0000362;6.22e-11;9!CL:0000451;6.10e-09;10!CL:0002159;2.36e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.04e-45,2;CL:0000784,6.50e-30,3;CL:0000312,7.24e-19,5;CL:0000240,6.71e-16,6;CL:0000311,6.71e-16,6;CL:0000079,6.71e-16,6;CL:0000237,6.71e-16,6;CL:0000036,6.71e-16,6;CL:0000357,6.71e-16,6;CL:0000114,6.71e-16,6;CL:0000362,6.22e-11,9;CL:0000451,6.61e-09,10;CL:0002159,2.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;6.71e-16;6!CL:0000114;6.71e-16;6 | |||
|ontology_enrichment_disease=DOID:8692!2.29e-09!31;DOID:1240!1.37e-08!39;DOID:74!2.37e-07!2;DOID:2531!3.38e-07!51;DOID:0060083!3.38e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.19e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.40e-07;15!UBERON:0007376;6.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.40e-07,15;UBERON:0007376,6.40e-07,15;UBERON:0007383,6.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0.211673582723883,0.649243880549111,0,0.684704037099577,0.94007937463814,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0.781552381608161,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,2.75794698593172,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83503302194451,5.94176217304383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87151570769685,0.198950775161368,0,0,0,1.35866559210006,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.968833647540092,0.806971285846153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@GFI1 | |||
}} |
Revision as of 07:13, 12 September 2013
Short description: | p9@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GFI1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -125bp_to_BC074866, BC074867_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.04e-45 | 2 |
plasmacytoid dendritic cell | 6.50e-30 | 3 |
keratinocyte | 7.24e-19 | 5 |
stratified squamous epithelial cell | 6.71e-16 | 6 |
keratin accumulating cell | 6.71e-16 | 6 |
stratified epithelial cell | 6.71e-16 | 6 |
keratinizing barrier epithelial cell | 6.71e-16 | 6 |
epithelial fate stem cell | 6.71e-16 | 6 |
stratified epithelial stem cell | 6.71e-16 | 6 |
surface ectodermal cell | 6.71e-16 | 6 |
epidermal cell | 6.22e-11 | 9 |
dendritic cell | 6.61e-09 | 10 |
general ecto-epithelial cell | 2.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.40e-07 | 15 |
outer epithelium | 6.40e-07 | 15 |
enveloping layer of ectoderm | 6.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.