FFCP PHASE1:Hg19::chr20:4229843..4229952,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=146|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=280|TSSclassifier=S|UniProt=P25100|association_with_transcript=-122bp_to_ENST00000379453_5end|coexpression_cluster_id=C63|description=CAGE_peak_1_at_ADRA1D_5end|id=chr20:4229843..4229952,-|ontology_enrichment_celltype=CL:0000055!9.09e-10!180;CL:0002620!2.86e-09!23|ontology_enrichment_celltype_v019=CL:0002620;1.08e-09;23!CL:0002319;3.73e-07;25|ontology_enrichment_celltype_v019_2=CL:0002620,1.11e-09,23;CL:0002319,3.12e-07,25|ontology_enrichment_development_v019=UBERON:0006238;1.10e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.69e-22!365;UBERON:0005743!7.71e-16!86;UBERON:0001017!1.42e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0000468!1.59e-13!659;UBERON:0007023!2.52e-13!115;UBERON:0000955!8.99e-13!69;UBERON:0006238!8.99e-13!69;UBERON:0001049!3.76e-12!57;UBERON:0005068!3.76e-12!57;UBERON:0006241!3.76e-12!57;UBERON:0007135!3.76e-12!57;UBERON:0002346!7.91e-12!90;UBERON:0000481!1.12e-11!347;UBERON:0000924!3.03e-11!173;UBERON:0006601!3.03e-11!173;UBERON:0000467!1.11e-10!625;UBERON:0000480!1.52e-10!626;UBERON:0001869!7.00e-10!32;UBERON:0000033!8.70e-10!123;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0001893!1.13e-09!34;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0004121!1.49e-09!169;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0002616!3.34e-09!59;UBERON:0003080!4.02e-09!42;UBERON:0002791!4.58e-09!33;UBERON:0002780!8.00e-09!41;UBERON:0001890!8.00e-09!41;UBERON:0006240!8.00e-09!41;UBERON:0000062!1.97e-08!511;UBERON:0000119!2.06e-08!312;UBERON:0000483!2.56e-08!309;UBERON:0000956!2.94e-08!25;UBERON:0000203!2.94e-08!25;UBERON:0004111!2.98e-08!241;UBERON:0000477!3.71e-08!286;UBERON:0003056!1.03e-07!61;UBERON:0002100!4.15e-07!216;UBERON:0002619!4.92e-07!22;UBERON:0000922!6.16e-07!612;UBERON:0003102!6.46e-07!95;UBERON:0000025!9.47e-07!194|ontology_enrichment_uberon_v019=UBERON:0002050;2.99e-09;5!UBERON:0005423;2.99e-09;5!UBERON:0002346;7.75e-08;4!UBERON:0000923;7.75e-08;4!UBERON:0010316;7.75e-08;4!UBERON:0005291;7.75e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-11,81;UBERON:0004121,4.35e-11,171;UBERON:0000924,4.35e-11,171;UBERON:0006601,4.35e-11,171;UBERON:0001016,5.03e-11,89;UBERON:0000955,5.37e-10,68;UBERON:0006238,5.37e-10,68;UBERON:0002346,1.97e-08,86;UBERON:0002199,6.70e-08,46;UBERON:0002416,6.70e-08,46;UBERON:0002097,2.22e-07,41;UBERON:0003102,5.52e-07,99;UBERON:0001049,6.21e-07,56;UBERON:0005068,6.21e-07,56;UBERON:0006241,6.21e-07,56;UBERON:0007135,6.21e-07,56;UBERON:0000073,9.59e-07,53;UBERON:0002616,9.59e-07,53|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,0,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,1.60057375499824,2.44800829493104,6.58254915103984,1.14494394852423,1.64249310087461,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.175669571386252,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,1.77883131343355,0,2.01414658554573,0,1.46437234528902,0,1.62028389576352,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.70296429550139,0.936480230490962,0,2.54062756938062,1.64408298101271,0.809364721840658,0.561803226808994,0,0.245668634623536,0,3.56400857184616,3.4617370098998,0,2.15585442544872,0,0.250237039743928,0,3.5118209670467,5.82326812018137,2.10333282469236,0.453728732640084,3.22901344239952,2.34913127700424,3.39091041855299,3.30100205692843,0.618315175430633,1.28820270022815,1.11670113798954,5.23206629947925,3.31285817548075,1.51460264546469,1.84099797284599,0.969876340912871,3.55009592516614,2.31729825923573,1.18692414617341,0.773043412653187,0,0,0,0,0.116193942869518,0.414644220061482,0.504641701751257,0,1.56449532329816,9.00537313470039,15.1948413487729,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,15.426595118379,0,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0,0,0.651616610620649,2.07986957055916,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0.088048434013226,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0,5.85063856486715,6.24044621468197,0,0,0,0.285955987316295,4.34097284313154,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,1.77866236955724,2.60279707715243,5.41302168944387,0.167516265334349,2.55175500661265,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0.468565659970853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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=280 | |||
|TSSclassifier=S | |||
|UniProt=P25100 | |||
|association_with_transcript=-122bp_to_ENST00000379453_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_ADRA1D_5end | |||
|id=chr20:4229843..4229952,- | |||
|ontology_enrichment_celltype=CL:0000055!9.09e-10!180;CL:0002620!2.86e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.08e-09;23!CL:0002319;3.73e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.11e-09,23;CL:0002319,3.12e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.10e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.69e-22!365;UBERON:0005743!7.71e-16!86;UBERON:0001017!1.42e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0000468!1.59e-13!659;UBERON:0007023!2.52e-13!115;UBERON:0000955!8.99e-13!69;UBERON:0006238!8.99e-13!69;UBERON:0001049!3.76e-12!57;UBERON:0005068!3.76e-12!57;UBERON:0006241!3.76e-12!57;UBERON:0007135!3.76e-12!57;UBERON:0002346!7.91e-12!90;UBERON:0000481!1.12e-11!347;UBERON:0000924!3.03e-11!173;UBERON:0006601!3.03e-11!173;UBERON:0000467!1.11e-10!625;UBERON:0000480!1.52e-10!626;UBERON:0001869!7.00e-10!32;UBERON:0000033!8.70e-10!123;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0001893!1.13e-09!34;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0004121!1.49e-09!169;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0002616!3.34e-09!59;UBERON:0003080!4.02e-09!42;UBERON:0002791!4.58e-09!33;UBERON:0002780!8.00e-09!41;UBERON:0001890!8.00e-09!41;UBERON:0006240!8.00e-09!41;UBERON:0000062!1.97e-08!511;UBERON:0000119!2.06e-08!312;UBERON:0000483!2.56e-08!309;UBERON:0000956!2.94e-08!25;UBERON:0000203!2.94e-08!25;UBERON:0004111!2.98e-08!241;UBERON:0000477!3.71e-08!286;UBERON:0003056!1.03e-07!61;UBERON:0002100!4.15e-07!216;UBERON:0002619!4.92e-07!22;UBERON:0000922!6.16e-07!612;UBERON:0003102!6.46e-07!95;UBERON:0000025!9.47e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;2.99e-09;5!UBERON:0005423;2.99e-09;5!UBERON:0002346;7.75e-08;4!UBERON:0000923;7.75e-08;4!UBERON:0010316;7.75e-08;4!UBERON:0005291;7.75e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-11,81;UBERON:0004121,4.35e-11,171;UBERON:0000924,4.35e-11,171;UBERON:0006601,4.35e-11,171;UBERON:0001016,5.03e-11,89;UBERON:0000955,5.37e-10,68;UBERON:0006238,5.37e-10,68;UBERON:0002346,1.97e-08,86;UBERON:0002199,6.70e-08,46;UBERON:0002416,6.70e-08,46;UBERON:0002097,2.22e-07,41;UBERON:0003102,5.52e-07,99;UBERON:0001049,6.21e-07,56;UBERON:0005068,6.21e-07,56;UBERON:0006241,6.21e-07,56;UBERON:0007135,6.21e-07,56;UBERON:0000073,9.59e-07,53;UBERON:0002616,9.59e-07,53 | |||
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| |||
|short_description=p1@ADRA1D | |||
}} |
Revision as of 08:33, 12 September 2013
Short description: | p1@ADRA1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ADRA1D_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -122bp_to_ENST00000379453_5end |
EntrezGene: | ADRA1D |
HGNC: | 280 |
UniProt: | P25100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.11e-09 | 23 |
neural cell | 3.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.34e-11 | 81 |
ectoderm-derived structure | 4.35e-11 | 171 |
ectoderm | 4.35e-11 | 171 |
presumptive ectoderm | 4.35e-11 | 171 |
nervous system | 5.03e-11 | 89 |
brain | 5.37e-10 | 68 |
future brain | 5.37e-10 | 68 |
neurectoderm | 1.97e-08 | 86 |
integument | 6.70e-08 | 46 |
integumental system | 6.70e-08 | 46 |
skin of body | 2.22e-07 | 41 |
surface structure | 5.52e-07 | 99 |
neural tube | 6.21e-07 | 56 |
neural rod | 6.21e-07 | 56 |
future spinal cord | 6.21e-07 | 56 |
neural keel | 6.21e-07 | 56 |
regional part of nervous system | 9.59e-07 | 53 |
regional part of brain | 9.59e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.