FFCP PHASE1:Hg19::chr21:26947141..26947172,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr21:26947141..26947172,+|id=chr21:26947141..26947172,+|ontology_enrichment_celltype=CL:0002057!1.65e-24!42;CL:0002087!7.17e-24!119;CL:0000738!3.04e-23!140;CL:0002031!1.54e-22!124;CL:0000860!2.13e-22!45;CL:0000988!4.10e-21!182;CL:0002032!6.52e-20!165;CL:0000837!6.52e-20!165;CL:0000037!1.39e-19!172;CL:0000566!1.39e-19!172;CL:0002009!2.30e-17!65;CL:0000557!2.80e-15!71;CL:0002194!5.28e-15!63;CL:0000576!5.28e-15!63;CL:0000040!5.28e-15!63;CL:0000559!5.28e-15!63;CL:0000839!7.63e-13!70;CL:0000134!9.85e-13!358;CL:0002320!3.70e-12!365;CL:0000766!2.55e-11!76;CL:0000763!2.98e-11!112;CL:0000049!2.98e-11!112;CL:0000048!4.68e-11!430;CL:0000034!9.40e-11!444;CL:0000723!1.18e-10!436;CL:0000219!3.75e-10!390;CL:0000542!5.85e-09!53;CL:0000051!5.85e-09!53;CL:0000838!4.87e-08!52;CL:0000945!1.38e-07!24;CL:0000826!1.38e-07!24;CL:0000453!3.86e-07!5|ontology_enrichment_celltype_v019=CL:0000860;3.50e-45;33!CL:0002057;3.50e-45;33!CL:0000473;7.39e-31;39!CL:0000234;7.39e-31;39!CL:0000576;5.75e-28;48!CL:0000766;1.00e-19;69!CL:0002087;9.91e-16;104!CL:0002393;2.19e-15;6!CL:0002397;2.19e-15;6!CL:0000763;5.29e-10;100!CL:0000738;1.12e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-58,42;CL:0002057,1.39e-58,42;CL:0000473,5.43e-51,48;CL:0000234,5.43e-51,48;CL:0002194,2.36e-40,59;CL:0000576,2.36e-40,59;CL:0000040,2.36e-40,59;CL:0000559,2.36e-40,59;CL:0002009,5.59e-39,61;CL:0000839,6.66e-36,66;CL:0000557,2.43e-35,67;CL:0000766,9.13e-33,72;CL:0002087,2.29e-25,115;CL:0002031,3.24e-24,120;CL:0000763,3.55e-21,108;CL:0000049,3.55e-21,108;CL:0000738,4.30e-21,136;CL:0000988,8.29e-20,177;CL:0002032,1.92e-17,161;CL:0000837,1.92e-17,161;CL:0000037,1.30e-16,168;CL:0002393,2.05e-10,9;CL:0002397,2.05e-10,9|ontology_enrichment_development_v019=CL:0002057;5.21e-39;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;3.63e-11;1!DOID:0050177;3.63e-11;1!DOID:0050427;3.63e-11;1!DOID:0060060;5.43e-11;1!DOID:0060061;5.43e-11;1!DOID:8691;5.43e-11;1|ontology_enrichment_disease_v019_2=DOID:630,4.01e-11,1;DOID:0050177,4.01e-11,1;DOID:0050427,4.01e-11,1;DOID:0060060,5.43e-11,1;DOID:0060061,5.43e-11,1;DOID:8691,5.43e-11,1|ontology_enrichment_uberon=UBERON:0002390!9.23e-16!102;UBERON:0003061!9.23e-16!102;UBERON:0002193!1.73e-14!112;UBERON:0002371!6.15e-14!80;UBERON:0001474!1.89e-12!86;UBERON:0002384!5.39e-12!375;UBERON:0004765!2.71e-11!101;UBERON:0001434!2.71e-11!101;UBERON:0002405!7.04e-10!115;UBERON:0002204!3.40e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.04e-31,76;UBERON:0002390,3.53e-30,98;UBERON:0003061,3.53e-30,98;UBERON:0001474,1.53e-28,82;UBERON:0002193,3.49e-27,108;UBERON:0004765,7.89e-26,90;UBERON:0002405,6.24e-25,93;UBERON:0001434,4.85e-23,100;UBERON:0003081,2.51e-13,203;UBERON:0002204,6.91e-13,167;UBERON:0000926,1.25e-07,315;UBERON:0004120,1.25e-07,315;UBERON:0006603,1.25e-07,315|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.656804715599566,0.550975469195755,0,0,0,0,0,0,0,0.710846162437108,0,3.32397245119126,2.00544447470142,2.38711957787437,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.863077176966451,0.256160706529101,1.89185783910868,5.86067657252252,2.5819387343353,6.77132432971709,0.188242339542605,0,0,4.59125838556354,2.56743221660875,12.7867425159808,0,0,0,6.96502172708602,6.80862269629368,18.6846674698673,0,0,0.434377689410233,8.47559303686716,4.41933163185078,27.5322277073569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr21:26947141..26947172,+ | |||
|id=chr21:26947141..26947172,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.65e-24!42;CL:0002087!7.17e-24!119;CL:0000738!3.04e-23!140;CL:0002031!1.54e-22!124;CL:0000860!2.13e-22!45;CL:0000988!4.10e-21!182;CL:0002032!6.52e-20!165;CL:0000837!6.52e-20!165;CL:0000037!1.39e-19!172;CL:0000566!1.39e-19!172;CL:0002009!2.30e-17!65;CL:0000557!2.80e-15!71;CL:0002194!5.28e-15!63;CL:0000576!5.28e-15!63;CL:0000040!5.28e-15!63;CL:0000559!5.28e-15!63;CL:0000839!7.63e-13!70;CL:0000134!9.85e-13!358;CL:0002320!3.70e-12!365;CL:0000766!2.55e-11!76;CL:0000763!2.98e-11!112;CL:0000049!2.98e-11!112;CL:0000048!4.68e-11!430;CL:0000034!9.40e-11!444;CL:0000723!1.18e-10!436;CL:0000219!3.75e-10!390;CL:0000542!5.85e-09!53;CL:0000051!5.85e-09!53;CL:0000838!4.87e-08!52;CL:0000945!1.38e-07!24;CL:0000826!1.38e-07!24;CL:0000453!3.86e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-45;33!CL:0002057;3.50e-45;33!CL:0000473;7.39e-31;39!CL:0000234;7.39e-31;39!CL:0000576;5.75e-28;48!CL:0000766;1.00e-19;69!CL:0002087;9.91e-16;104!CL:0002393;2.19e-15;6!CL:0002397;2.19e-15;6!CL:0000763;5.29e-10;100!CL:0000738;1.12e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-58,42;CL:0002057,1.39e-58,42;CL:0000473,5.43e-51,48;CL:0000234,5.43e-51,48;CL:0002194,2.36e-40,59;CL:0000576,2.36e-40,59;CL:0000040,2.36e-40,59;CL:0000559,2.36e-40,59;CL:0002009,5.59e-39,61;CL:0000839,6.66e-36,66;CL:0000557,2.43e-35,67;CL:0000766,9.13e-33,72;CL:0002087,2.29e-25,115;CL:0002031,3.24e-24,120;CL:0000763,3.55e-21,108;CL:0000049,3.55e-21,108;CL:0000738,4.30e-21,136;CL:0000988,8.29e-20,177;CL:0002032,1.92e-17,161;CL:0000837,1.92e-17,161;CL:0000037,1.30e-16,168;CL:0002393,2.05e-10,9;CL:0002397,2.05e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.21e-39;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.63e-11;1!DOID:0050177;3.63e-11;1!DOID:0050427;3.63e-11;1!DOID:0060060;5.43e-11;1!DOID:0060061;5.43e-11;1!DOID:8691;5.43e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.01e-11,1;DOID:0050177,4.01e-11,1;DOID:0050427,4.01e-11,1;DOID:0060060,5.43e-11,1;DOID:0060061,5.43e-11,1;DOID:8691,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.23e-16!102;UBERON:0003061!9.23e-16!102;UBERON:0002193!1.73e-14!112;UBERON:0002371!6.15e-14!80;UBERON:0001474!1.89e-12!86;UBERON:0002384!5.39e-12!375;UBERON:0004765!2.71e-11!101;UBERON:0001434!2.71e-11!101;UBERON:0002405!7.04e-10!115;UBERON:0002204!3.40e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.04e-31,76;UBERON:0002390,3.53e-30,98;UBERON:0003061,3.53e-30,98;UBERON:0001474,1.53e-28,82;UBERON:0002193,3.49e-27,108;UBERON:0004765,7.89e-26,90;UBERON:0002405,6.24e-25,93;UBERON:0001434,4.85e-23,100;UBERON:0003081,2.51e-13,203;UBERON:0002204,6.91e-13,167;UBERON:0000926,1.25e-07,315;UBERON:0004120,1.25e-07,315;UBERON:0006603,1.25e-07,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.656804715599566,0.550975469195755,0,0,0,0,0,0,0,0.710846162437108,0,3.32397245119126,2.00544447470142,2.38711957787437,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.863077176966451,0.256160706529101,1.89185783910868,5.86067657252252,2.5819387343353,6.77132432971709,0.188242339542605,0,0,4.59125838556354,2.56743221660875,12.7867425159808,0,0,0,6.96502172708602,6.80862269629368,18.6846674698673,0,0,0.434377689410233,8.47559303686716,4.41933163185078,27.5322277073569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.0711418433484141,0,0,0,0,0,0.561594356226918,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55825354416746,1.35920332841153,0.939797545549098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,1.39991177098451,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.201273793591026,2.24397944612263 | |||
|short_description=p@chr21:26947141..26947172,+ | |||
}} |
Revision as of 09:55, 12 September 2013
Short description: | p@chr21:26947141..26947172, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:26947141..26947172, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.39e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-58 | 42 |
defensive cell | 5.43e-51 | 48 |
phagocyte | 5.43e-51 | 48 |
monopoietic cell | 2.36e-40 | 59 |
monocyte | 2.36e-40 | 59 |
monoblast | 2.36e-40 | 59 |
promonocyte | 2.36e-40 | 59 |
macrophage dendritic cell progenitor | 5.59e-39 | 61 |
myeloid lineage restricted progenitor cell | 6.66e-36 | 66 |
granulocyte monocyte progenitor cell | 2.43e-35 | 67 |
myeloid leukocyte | 9.13e-33 | 72 |
nongranular leukocyte | 2.29e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 3.24e-24 | 120 |
myeloid cell | 3.55e-21 | 108 |
common myeloid progenitor | 3.55e-21 | 108 |
leukocyte | 4.30e-21 | 136 |
hematopoietic cell | 8.29e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.92e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-17 | 161 |
hematopoietic stem cell | 1.30e-16 | 168 |
intermediate monocyte | 2.05e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.05e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.04e-31 | 76 |
hematopoietic system | 3.53e-30 | 98 |
blood island | 3.53e-30 | 98 |
bone element | 1.53e-28 | 82 |
hemolymphoid system | 3.49e-27 | 108 |
skeletal element | 7.89e-26 | 90 |
immune system | 6.24e-25 | 93 |
skeletal system | 4.85e-23 | 100 |
lateral plate mesoderm | 2.51e-13 | 203 |
musculoskeletal system | 6.91e-13 | 167 |
mesoderm | 1.25e-07 | 315 |
mesoderm-derived structure | 1.25e-07 | 315 |
presumptive mesoderm | 1.25e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.01e-11 | 1 |
monogenic disease | 4.01e-11 | 1 |
xeroderma pigmentosum | 4.01e-11 | 1 |
non-Hodgkin lymphoma | 5.43e-11 | 1 |
cutaneous T cell lymphoma | 5.43e-11 | 1 |
mycosis fungoides | 5.43e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.