FFCP PHASE1:Hg19::chr2:102686820..102686869,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5993|TSSclassifier=S|UniProt=B8ZZW4,B8ZZ73|association_with_transcript=0bp_to_ENST00000409929,ENST00000424272,uc010fix.2_5end|description=CAGE_peak_9_at_IL1R1_5end|id=chr2:102686820..102686869,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000453;1.81e-12;5!CL:0000182;6.27e-11;12!CL:0000056;1.64e-08;4!CL:0000680;4.68e-07;7|ontology_enrichment_celltype_v019_2=CL:0000453,1.71e-12,5;CL:0000182,5.84e-11,12;CL:0000515,1.44e-08,4|ontology_enrichment_development_v019=UBERON:0004161;2.16e-11;11!UBERON:0003104;5.91e-10;31!UBERON:0009497;2.16e-09;13!CL:0000515;1.64e-08;4!UBERON:0001041;1.52e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.17e-14!115;UBERON:0000475!3.05e-12!365;UBERON:0000481!2.55e-09!347;UBERON:0002100!4.42e-08!216;UBERON:0005256!9.15e-08!143;UBERON:0001007!1.09e-07!155;UBERON:0001555!1.09e-07!155;UBERON:0007026!1.09e-07!155;UBERON:0003929!1.18e-07!54;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238;UBERON:0002385!2.33e-07!63;UBERON:0001015!2.33e-07!63;UBERON:0000383!2.33e-07!63;UBERON:0001134!7.26e-07!61;UBERON:0002036!7.26e-07!61;UBERON:0003082!7.26e-07!61;UBERON:0009497!8.33e-07!25;UBERON:0000015!8.33e-07!25;UBERON:0002423!8.33e-07!25;UBERON:0006235!8.33e-07!25;UBERON:0004161!8.33e-07!25|ontology_enrichment_uberon_v019=UBERON:0002423;4.84e-10;25!UBERON:0002107;7.61e-10;19!UBERON:0006925;7.61e-10;19!UBERON:0002368;1.17e-07;33!UBERON:0001134;6.36e-07;16!UBERON:0002036;6.36e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.85e-10,25;UBERON:0000015,4.85e-10,25;UBERON:0002423,4.85e-10,25;UBERON:0006235,4.85e-10,25;UBERON:0004161,4.85e-10,25;UBERON:0002107,5.96e-10,19;UBERON:0006925,5.96e-10,19;UBERON:0008836,5.96e-10,19;UBERON:0009854,2.57e-09,23;UBERON:0002368,4.97e-09,35;UBERON:0005172,1.11e-08,54;UBERON:0005173,1.11e-08,54;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009569,5.14e-08,112;UBERON:0009856,6.07e-08,26;UBERON:0003929,2.16e-07,54;UBERON:0005177,2.24e-07,101;UBERON:0002417,2.33e-07,60;UBERON:0000916,2.33e-07,60;UBERON:0001007,2.52e-07,145;UBERON:0001555,2.52e-07,145;UBERON:0007026,2.52e-07,145;UBERON:0000949,2.82e-07,45;UBERON:0007499,5.16e-07,25;UBERON:0005911,7.18e-07,82;UBERON:0005256,9.92e-07,122|phase1_expression=0.908391896352783,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0.490385709340376,0.756787138224657,1.15235184896,0.234321431833797,0.624320153660641,0.570471821544449,0.747243402759005,0,0,0,1.63323337003915,0.122834317311768,0.516628905878827,2.37600571456411,2.71993622206413,0,0,0,0.125118519871964,2.49357703935765,0,2.75839016219118,1.20190447125277,0.453728732640084,0.179389635688862,0.427114777637135,0.211931901159562,0,0.103052529238439,0.515281080091258,0.744467425326359,0.337552664482532,0.292311015483596,0,0.552299391853796,0.323292113637624,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,7.60530208930985,4.91413608338813,2.36315962672562,0,0.368965315629341,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,0,3.57656445851882,2.535908257668,1.32969058292435,0,0,0,0,0.57191197463259,0,0.823240336780769,1.95441710576241,0.355391948742546,0.791951872933429,1.50719688529793,0,0.399891964728228,0,0,0,0,0,2.85273810081437,1.88215698667853,1.02738161275192,2.32779252211864,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.623912584592421,0.892144943985809,0.788512075169673,1.05427273493442,0,0,0,0,0,0.260650843404249,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.925258162815933,0.532685175939381,1.47828880824856,2.07701771673448,0.464841513839837,0,0,0,0.803701137152247,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,2.7821073144885,0,0.082509499920588,0.574265537996172,0,0,0.0966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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |||
|TSSclassifier=S | |||
|UniProt=B8ZZW4,B8ZZ73 | |||
|association_with_transcript=0bp_to_ENST00000409929,ENST00000424272,uc010fix.2_5end | |||
|description=CAGE_peak_9_at_IL1R1_5end | |||
|id=chr2:102686820..102686869,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.81e-12;5!CL:0000182;6.27e-11;12!CL:0000056;1.64e-08;4!CL:0000680;4.68e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.71e-12,5;CL:0000182,5.84e-11,12;CL:0000515,1.44e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-11;11!UBERON:0003104;5.91e-10;31!UBERON:0009497;2.16e-09;13!CL:0000515;1.64e-08;4!UBERON:0001041;1.52e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.17e-14!115;UBERON:0000475!3.05e-12!365;UBERON:0000481!2.55e-09!347;UBERON:0002100!4.42e-08!216;UBERON:0005256!9.15e-08!143;UBERON:0001007!1.09e-07!155;UBERON:0001555!1.09e-07!155;UBERON:0007026!1.09e-07!155;UBERON:0003929!1.18e-07!54;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238;UBERON:0002385!2.33e-07!63;UBERON:0001015!2.33e-07!63;UBERON:0000383!2.33e-07!63;UBERON:0001134!7.26e-07!61;UBERON:0002036!7.26e-07!61;UBERON:0003082!7.26e-07!61;UBERON:0009497!8.33e-07!25;UBERON:0000015!8.33e-07!25;UBERON:0002423!8.33e-07!25;UBERON:0006235!8.33e-07!25;UBERON:0004161!8.33e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.84e-10;25!UBERON:0002107;7.61e-10;19!UBERON:0006925;7.61e-10;19!UBERON:0002368;1.17e-07;33!UBERON:0001134;6.36e-07;16!UBERON:0002036;6.36e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.85e-10,25;UBERON:0000015,4.85e-10,25;UBERON:0002423,4.85e-10,25;UBERON:0006235,4.85e-10,25;UBERON:0004161,4.85e-10,25;UBERON:0002107,5.96e-10,19;UBERON:0006925,5.96e-10,19;UBERON:0008836,5.96e-10,19;UBERON:0009854,2.57e-09,23;UBERON:0002368,4.97e-09,35;UBERON:0005172,1.11e-08,54;UBERON:0005173,1.11e-08,54;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009569,5.14e-08,112;UBERON:0009856,6.07e-08,26;UBERON:0003929,2.16e-07,54;UBERON:0005177,2.24e-07,101;UBERON:0002417,2.33e-07,60;UBERON:0000916,2.33e-07,60;UBERON:0001007,2.52e-07,145;UBERON:0001555,2.52e-07,145;UBERON:0007026,2.52e-07,145;UBERON:0000949,2.82e-07,45;UBERON:0007499,5.16e-07,25;UBERON:0005911,7.18e-07,82;UBERON:0005256,9.92e-07,122 | |||
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| |||
|short_description=p9@IL1R1 | |||
}} |
Revision as of 12:44, 12 September 2013
Short description: | p9@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409929, ENST00000424272, uc010fix.2_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B8ZZW4B8ZZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.71e-12 | 5 |
hepatocyte | 5.84e-11 | 12 |
skeletal muscle myoblast | 1.44e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.85e-10 | 25 |
anatomical boundary | 4.85e-10 | 25 |
hepatobiliary system | 4.85e-10 | 25 |
foregut-midgut junction | 4.85e-10 | 25 |
septum transversum | 4.85e-10 | 25 |
liver | 5.96e-10 | 19 |
digestive gland | 5.96e-10 | 19 |
liver bud | 5.96e-10 | 19 |
digestive tract diverticulum | 2.57e-09 | 23 |
endocrine gland | 4.97e-09 | 35 |
abdomen element | 1.11e-08 | 54 |
abdominal segment element | 1.11e-08 | 54 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
subdivision of trunk | 5.14e-08 | 112 |
sac | 6.07e-08 | 26 |
gut epithelium | 2.16e-07 | 54 |
trunk region element | 2.24e-07 | 101 |
abdominal segment of trunk | 2.33e-07 | 60 |
abdomen | 2.33e-07 | 60 |
digestive system | 2.52e-07 | 145 |
digestive tract | 2.52e-07 | 145 |
primitive gut | 2.52e-07 | 145 |
endocrine system | 2.82e-07 | 45 |
epithelial sac | 5.16e-07 | 25 |
endo-epithelium | 7.18e-07 | 82 |
trunk mesenchyme | 9.92e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.